BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00007175
         (313 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KMZ71261.1 hypothetical protein ZOSMA_184G00120 [Zostera marina]       52   1e-06
XP_008459458.1 PREDICTED: DNA-directed RNA polymerase II subunit...    53   1e-06
XP_010520027.1 PREDICTED: DNA-directed RNA polymerase II subunit...    52   4e-06
XP_004138390.1 PREDICTED: DNA-directed RNA polymerase II subunit...    52   4e-06
KGN52571.1 hypothetical protein Csa_5G643990 [Cucumis sativus]         52   4e-06
KMZ56185.1 DNA-directed RNA polymerase II subunit 4 [Zostera mar...    52   5e-06
XP_006288864.1 hypothetical protein CARUB_v10002229mg [Capsella ...    52   5e-06
XP_004141497.1 PREDICTED: DNA-directed RNA polymerase II subunit...    52   5e-06
KDO59899.1 hypothetical protein CISIN_1g0325681mg, partial [Citr...    50   5e-06
KHG12393.1 DNA-directed RNA polymerase II subunit RPB4 [Gossypiu...    51   5e-06
KDO37892.1 hypothetical protein CISIN_1g0424881mg, partial [Citr...    50   5e-06
KJB71267.1 hypothetical protein B456_011G113800 [Gossypium raimo...    51   7e-06
KHG11711.1 DNA-directed RNA polymerase II subunit RPB4 [Gossypiu...    51   7e-06
OMO55927.1 RNA polymerase II, Rpb4 [Corchorus capsularis]              51   7e-06
XP_016715131.1 PREDICTED: DNA-directed RNA polymerase II subunit...    51   7e-06
XP_012487157.1 PREDICTED: DNA-directed RNA polymerase II subunit...    51   7e-06
XP_010940283.1 PREDICTED: DNA-directed RNA polymerase II subunit...    51   7e-06
XP_017982148.1 PREDICTED: DNA-directed RNA polymerase II subunit...    51   7e-06
XP_017648160.1 PREDICTED: DNA-directed RNA polymerase II subunit...    51   7e-06
OMP02563.1 RNA polymerase II, Rpb4 [Corchorus olitorius]               51   8e-06

>KMZ71261.1 hypothetical protein ZOSMA_184G00120 [Zostera marina]
          Length = 69

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KTKGR H DDAIEKMLHDLSLIKKFE
Sbjct: 43  VKTKGRSHTDDAIEKMLHDLSLIKKFE 69


>XP_008459458.1 PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Cucumis
           melo] XP_008459459.1 PREDICTED: DNA-directed RNA
           polymerase II subunit 4-like [Cucumis melo]
          Length = 138

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 24/27 (88%), Positives = 27/27 (100%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           LKTKGR+HDD+AIEKML+DLSLIKKFE
Sbjct: 112 LKTKGRVHDDEAIEKMLNDLSLIKKFE 138


>XP_010520027.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Tarenaya
           hassleriana]
          Length = 138

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 23/27 (85%), Positives = 27/27 (100%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           LKTKGR+HDD+AIEKML+DLSLIK+FE
Sbjct: 112 LKTKGRVHDDEAIEKMLNDLSLIKRFE 138


>XP_004138390.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Cucumis
           sativus] XP_008456795.1 PREDICTED: DNA-directed RNA
           polymerase II subunit 4 [Cucumis melo] XP_011656444.1
           PREDICTED: DNA-directed RNA polymerase II subunit 4
           [Cucumis sativus] KGN45845.1 hypothetical protein
           Csa_6G014650 [Cucumis sativus]
          Length = 138

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 23/27 (85%), Positives = 27/27 (100%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           LKTKGR+HDD+AIEKML+DLSLIK+FE
Sbjct: 112 LKTKGRVHDDEAIEKMLNDLSLIKRFE 138


>KGN52571.1 hypothetical protein Csa_5G643990 [Cucumis sativus]
          Length = 121

 Score = 51.6 bits (122), Expect = 4e-06
 Identities = 23/27 (85%), Positives = 27/27 (100%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           LKTKGR+H+D+AIEKML+DLSLIKKFE
Sbjct: 95  LKTKGRVHEDEAIEKMLNDLSLIKKFE 121


>KMZ56185.1 DNA-directed RNA polymerase II subunit 4 [Zostera marina]
          Length = 138

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KTKGR H DDAIEKMLHDLSLIKKFE
Sbjct: 112 VKTKGRSHTDDAIEKMLHDLSLIKKFE 138


>XP_006288864.1 hypothetical protein CARUB_v10002229mg [Capsella rubella]
           EOA21762.1 hypothetical protein CARUB_v10002229mg
           [Capsella rubella]
          Length = 138

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           LKTKGR HDDDAIEKML+DLSL+K+FE
Sbjct: 112 LKTKGRAHDDDAIEKMLNDLSLVKRFE 138


>XP_004141497.1 PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Cucumis
           sativus]
          Length = 138

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 23/27 (85%), Positives = 27/27 (100%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           LKTKGR+H+D+AIEKML+DLSLIKKFE
Sbjct: 112 LKTKGRVHEDEAIEKMLNDLSLIKKFE 138


>KDO59899.1 hypothetical protein CISIN_1g0325681mg, partial [Citrus sinensis]
          Length = 59

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KT+GR HDD+AIEKML+DLSLIKKFE
Sbjct: 33  IKTRGRAHDDEAIEKMLNDLSLIKKFE 59


>KHG12393.1 DNA-directed RNA polymerase II subunit RPB4 [Gossypium arboreum]
           KJB38134.1 hypothetical protein B456_006G238100
           [Gossypium raimondii]
          Length = 124

 Score = 51.2 bits (121), Expect = 5e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KTKGR HDDDAIE+ML+DLSLIKKFE
Sbjct: 98  IKTKGRAHDDDAIERMLNDLSLIKKFE 124


>KDO37892.1 hypothetical protein CISIN_1g0424881mg, partial [Citrus sinensis]
          Length = 61

 Score = 49.7 bits (117), Expect = 5e-06
 Identities = 22/27 (81%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KT+GR HDD+AIEKML+DLSLIKKFE
Sbjct: 35  IKTRGRAHDDEAIEKMLNDLSLIKKFE 61


>KJB71267.1 hypothetical protein B456_011G113800 [Gossypium raimondii]
          Length = 134

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KTKGR HDDDAIE+ML+DLSLIKKFE
Sbjct: 108 IKTKGRAHDDDAIERMLNDLSLIKKFE 134


>KHG11711.1 DNA-directed RNA polymerase II subunit RPB4 [Gossypium arboreum]
          Length = 135

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KTKGR HDDDAIE+ML+DLSLIKKFE
Sbjct: 109 IKTKGRAHDDDAIERMLNDLSLIKKFE 135


>OMO55927.1 RNA polymerase II, Rpb4 [Corchorus capsularis]
          Length = 138

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KTKGR HDDDAIE+ML+DLSLIKKFE
Sbjct: 112 IKTKGRAHDDDAIERMLNDLSLIKKFE 138


>XP_016715131.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Gossypium
           hirsutum]
          Length = 138

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KTKGR HDDDAIE+ML+DLSLIKKFE
Sbjct: 112 IKTKGRAHDDDAIERMLNDLSLIKKFE 138


>XP_012487157.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Gossypium
           raimondii] XP_012457051.1 PREDICTED: DNA-directed RNA
           polymerase II subunit 4 [Gossypium raimondii]
           XP_017608639.1 PREDICTED: DNA-directed RNA polymerase II
           subunit 4 [Gossypium arboreum] KJB38133.1 hypothetical
           protein B456_006G238100 [Gossypium raimondii] KJB71268.1
           hypothetical protein B456_011G113800 [Gossypium
           raimondii] KJB71269.1 hypothetical protein
           B456_011G113800 [Gossypium raimondii]
          Length = 138

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KTKGR HDDDAIE+ML+DLSLIKKFE
Sbjct: 112 IKTKGRAHDDDAIERMLNDLSLIKKFE 138


>XP_010940283.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Elaeis
           guineensis]
          Length = 138

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 23/27 (85%), Positives = 27/27 (100%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +K+KGRIH+DDAIEKML+DLSLIKKFE
Sbjct: 112 IKSKGRIHEDDAIEKMLNDLSLIKKFE 138


>XP_017982148.1 PREDICTED: DNA-directed RNA polymerase II subunit 4 [Theobroma
           cacao] EOX92292.1 RNA polymerase II, Rpb4, core protein
           isoform 1 [Theobroma cacao] EOX92293.1 RNA polymerase
           II, Rpb4, core protein isoform 1 [Theobroma cacao]
          Length = 138

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KTKGR HDDDAIE+ML+DLSLIKKFE
Sbjct: 112 IKTKGRAHDDDAIERMLNDLSLIKKFE 138


>XP_017648160.1 PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Gossypium
           arboreum]
          Length = 139

 Score = 51.2 bits (121), Expect = 7e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KTKGR HDDDAIE+ML+DLSLIKKFE
Sbjct: 113 IKTKGRAHDDDAIERMLNDLSLIKKFE 139


>OMP02563.1 RNA polymerase II, Rpb4 [Corchorus olitorius]
          Length = 147

 Score = 51.2 bits (121), Expect = 8e-06
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = -2

Query: 312 LKTKGRIHDDDAIEKMLHDLSLIKKFE 232
           +KTKGR HDDDAIE+ML+DLSLIKKFE
Sbjct: 121 IKTKGRAHDDDAIERMLNDLSLIKKFE 147