BLASTX nr result
ID: Magnolia22_contig00003378
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Magnolia22_contig00003378
(8203 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_010242918.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2159 0.0
XP_002274051.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2158 0.0
XP_018684753.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2151 0.0
JAT39990.1 DNA-directed RNA polymerase II subunit RPB2 [Anthuriu... 2147 0.0
XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2137 0.0
XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2137 0.0
XP_006859038.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2136 0.0
AAZ08457.1 RNA polymerase II second largest subunit [Rhododendro... 2136 0.0
OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta] 2135 0.0
XP_010920288.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 2133 0.0
XP_015690688.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2132 0.0
XP_006650345.2 PREDICTED: DNA-directed RNA polymerase II subunit... 2132 0.0
XP_012449722.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2132 0.0
XP_008801262.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2132 0.0
XP_016179997.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2130 0.0
XP_011027835.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2130 0.0
EEE59590.1 hypothetical protein OsJ_11898 [Oryza sativa Japonica... 2130 0.0
XP_015631661.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2130 0.0
XP_020094305.1 DNA-directed RNA polymerase II subunit RPB2 [Anan... 2129 0.0
XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit... 2128 0.0
>XP_010242918.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nelumbo
nucifera]
Length = 1189
Score = 2159 bits (5594), Expect = 0.0
Identities = 1073/1158 (92%), Positives = 1099/1158 (94%), Gaps = 22/1158 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 18 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 77
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
F E+IYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+I+KGHD
Sbjct: 78 FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 137
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
CEEVTETQ+F KVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 138 CEEVTETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 197
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS MFVRMLSR SAK GSSGQY
Sbjct: 198 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 257
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIRTEIPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 258 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 317
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRGSTVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKA+YFGYIIHRLLLC
Sbjct: 318 VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 377
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 378 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 437
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 438 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 497
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI
Sbjct: 498 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 557
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQATKIFVNGCWVGIHRNP+LLVKT +DVNTEVGVIRDIRLKELRLYTD
Sbjct: 558 SPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 617
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEG-WHDLVAKGFIEYVDXXXXXXXXXX 2009
YGRCSRPLFIV++QRLLIKKK I ALQQRE+ EEG WHDLVAKGFIEYVD
Sbjct: 618 YGRCSRPLFIVEKQRLLIKKKDIRALQQRESSEEGGWHDLVAKGFIEYVDTEEEETTMIS 677
Query: 2010 XXXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2189
DL++AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 678 MTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 737
Query: 2190 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2369
MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 738 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 797
Query: 2370 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDG 2549
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+RE+TMGMRHGSYDKLDDDG
Sbjct: 798 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPSRENTMGMRHGSYDKLDDDG 857
Query: 2550 LAPPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNAD 2729
LAPPGTRVSGEDVIIGKTTPIAQDD+QGQ++RYTRRDHSTSLRHSESGMVDQVLLTTNAD
Sbjct: 858 LAPPGTRVSGEDVIIGKTTPIAQDDSQGQSSRYTRRDHSTSLRHSESGMVDQVLLTTNAD 917
Query: 2730 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 2909
GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 918 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 977
Query: 2910 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3089
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 978 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1037
Query: 3090 RLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3269
+L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1038 KLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1097
Query: 3270 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3449
AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1098 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1157
Query: 3450 KLLFQELMAMAIAPRMLT 3503
KLLFQELM+MAIAPRMLT
Sbjct: 1158 KLLFQELMSMAIAPRMLT 1175
>XP_002274051.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] CAN72948.1 hypothetical protein VITISV_033708
[Vitis vinifera] CBI21848.3 unnamed protein product,
partial [Vitis vinifera]
Length = 1193
Score = 2158 bits (5592), Expect = 0.0
Identities = 1076/1158 (92%), Positives = 1098/1158 (94%), Gaps = 22/1158 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 22 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 81
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
F E+IYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRII+KGHD
Sbjct: 82 FLETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 141
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
EEVTETQ+FTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 142 LEEVTETQEFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS MFVRMLSR SAK GSSGQY
Sbjct: 202 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIRTEIPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 262 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRGSTVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKA+YFGYIIHRLLLC
Sbjct: 322 VALDYIGKRGSTVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 382 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAI 441
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 442 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI
Sbjct: 502 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 561
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQ+TKIFVNGCWVGIHRNPDLLVKT +DVNTEVGVIRDIRLKELRLYTD
Sbjct: 562 SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 621
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEG-WHDLVAKGFIEYVDXXXXXXXXXX 2009
YGRCSRPLFIV++QRLLIKK+ I ALQ RE+ E+G WHDLV+KGFIEYVD
Sbjct: 622 YGRCSRPLFIVEKQRLLIKKRDIRALQLRESPEDGGWHDLVSKGFIEYVDTEEEETTMIS 681
Query: 2010 XXXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2189
DLISAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 682 MTINDLISARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741
Query: 2190 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2369
MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 742 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801
Query: 2370 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDG 2549
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRE+TMGMRHGSYDKLDDDG
Sbjct: 802 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDG 861
Query: 2550 LAPPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNAD 2729
LAPPGTRVSGEDVIIGKTTPI+QDD+QGQA+RYTRRDHSTSLRHSESGMVDQVLLTTNAD
Sbjct: 862 LAPPGTRVSGEDVIIGKTTPISQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNAD 921
Query: 2730 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 2909
GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 922 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 981
Query: 2910 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3089
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 982 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1041
Query: 3090 RLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3269
RL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1042 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1101
Query: 3270 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3449
AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1102 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1161
Query: 3450 KLLFQELMAMAIAPRMLT 3503
KLLFQELMAMAIAPRMLT
Sbjct: 1162 KLLFQELMAMAIAPRMLT 1179
>XP_018684753.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Musa
acuminata subsp. malaccensis]
Length = 1184
Score = 2151 bits (5573), Expect = 0.0
Identities = 1065/1157 (92%), Positives = 1093/1157 (94%), Gaps = 21/1157 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 16 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 75
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
F E+IYKISFGQIYLS+PMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRII+KGHD
Sbjct: 76 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 135
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
CEEV ETQDF KVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 136 CEEVAETQDFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 195
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE QNRP S MFVRMLSR SAK GSSGQY
Sbjct: 196 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 255
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIR +IPIII+FRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 256 IRATLPYIRADIPIIIIFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKA+YFGYIIHRLLLC
Sbjct: 316 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 375
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
A+GRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 376 AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 435
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 436 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 495
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEWSTENFEEI
Sbjct: 496 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTENFEEI 555
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQ+TKIFVNGCWVGIHRNPDLLVKT IDVNTEVGVIRDIRLKELRLYTD
Sbjct: 556 SPAVIPQSTKIFVNGCWVGIHRNPDLLVKTLRQLRRQIDVNTEVGVIRDIRLKELRLYTD 615
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEGWHDLVAKGFIEYVDXXXXXXXXXXX 2012
YGRCSRPLFIV++QRLLIKKK I ALQQRET EEGWHDLV+KGFIEY+D
Sbjct: 616 YGRCSRPLFIVEKQRLLIKKKDIRALQQRETPEEGWHDLVSKGFIEYIDTEEEETTMISM 675
Query: 2013 XXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2192
DL++AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 676 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 735
Query: 2193 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2372
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 736 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 795
Query: 2373 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDGL 2552
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRE+TMGMRHGSY+KLDDDGL
Sbjct: 796 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYEKLDDDGL 855
Query: 2553 APPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNADG 2732
APPGTRVSGEDVIIGKT+PI QDDAQGQA+RYTRRDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 856 APPGTRVSGEDVIIGKTSPIPQDDAQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 915
Query: 2733 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSR 2912
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 916 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 975
Query: 2913 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3092
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 976 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1035
Query: 3093 LPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3272
L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1036 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1095
Query: 3273 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3452
HGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1096 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1155
Query: 3453 LLFQELMAMAIAPRMLT 3503
LLFQELMAMAIAPRMLT
Sbjct: 1156 LLFQELMAMAIAPRMLT 1172
>JAT39990.1 DNA-directed RNA polymerase II subunit RPB2 [Anthurium amnicola]
JAT42934.1 DNA-directed RNA polymerase II subunit RPB2
[Anthurium amnicola] JAT51792.1 DNA-directed RNA
polymerase II subunit RPB2 [Anthurium amnicola]
JAT61623.1 DNA-directed RNA polymerase II subunit RPB2
[Anthurium amnicola]
Length = 1173
Score = 2147 bits (5563), Expect = 0.0
Identities = 1060/1157 (91%), Positives = 1094/1157 (94%), Gaps = 21/1157 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD
Sbjct: 15 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 74
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
F E+IYKISFGQIYLS+PMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRII+KGHD
Sbjct: 75 FLETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIKKGHD 134
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
CEEV ETQ+F KVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 135 CEEVAETQEFAKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 194
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNK+AYVAEVRSMAE+QNRP S MFVRMLSR SAK GSSGQY
Sbjct: 195 IAQEKMSTNHVYVFKKRQPNKFAYVAEVRSMAESQNRPASSMFVRMLSRTSAKGGSSGQY 254
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIR ++PIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 255 IRATLPYIRADVPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 314
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKA+YFGYIIHRLLLC
Sbjct: 315 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 374
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 375 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVKSYVQKCVDNGKDVNLQFAI 434
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 435 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 494
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI
Sbjct: 495 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 554
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQATKIFVNGCWVGIHRNPDLLVKT +DVNTEVG+IRDIRLKELRLYTD
Sbjct: 555 SPAVIPQATKIFVNGCWVGIHRNPDLLVKTLRQLRRQVDVNTEVGIIRDIRLKELRLYTD 614
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEGWHDLVAKGFIEYVDXXXXXXXXXXX 2012
YGRCSRPLFIV++Q LLIKK+HI ALQQRE+QEEGWHDLV KGFIEY+D
Sbjct: 615 YGRCSRPLFIVEKQTLLIKKRHIRALQQRESQEEGWHDLVTKGFIEYIDTEEEETTMISM 674
Query: 2013 XXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2192
DLI+AR NPEEAY+ETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 675 TINDLINARQNPEEAYAETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 734
Query: 2193 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2372
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 735 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 794
Query: 2373 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDGL 2552
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNR++TMGMRHGSYDKLDDDGL
Sbjct: 795 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRDNTMGMRHGSYDKLDDDGL 854
Query: 2553 APPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNADG 2732
APPGTRVSGEDVIIGKT+PI QD++QGQA+RYTRRDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 855 APPGTRVSGEDVIIGKTSPIPQDESQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 914
Query: 2733 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSR 2912
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 915 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 974
Query: 2913 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3092
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR
Sbjct: 975 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 1034
Query: 3093 LPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3272
L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1035 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1094
Query: 3273 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3452
HGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKN+FECRGCKNKTDIVQVHIPYACK
Sbjct: 1095 HGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNTFECRGCKNKTDIVQVHIPYACK 1154
Query: 3453 LLFQELMAMAIAPRMLT 3503
LLFQELMAMAIAPRMLT
Sbjct: 1155 LLFQELMAMAIAPRMLT 1171
>XP_012091599.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha
curcas]
Length = 1193
Score = 2137 bits (5537), Expect = 0.0
Identities = 1061/1158 (91%), Positives = 1092/1158 (94%), Gaps = 22/1158 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG Q D
Sbjct: 22 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPD 81
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+IYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+I+KGHD
Sbjct: 82 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 141
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
EEVTETQDFTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 142 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 201
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS MFVRMLSR SAK GSSGQY
Sbjct: 202 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQY 261
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIRTEIPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 262 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 321
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGEYCETKKA+YFGYIIHRLLLC
Sbjct: 322 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 381
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 382 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKDVRSYVQKCVDNGKDVNLQFAI 441
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 442 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 501
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEEW TENFEEI
Sbjct: 502 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 561
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQATKIFVNGCWVGIHR+PD+LVKT +DVNTEVGV+RDIRLKELR+YTD
Sbjct: 562 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 621
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEG-WHDLVAKGFIEYVDXXXXXXXXXX 2009
YGRCSRPLFIV++QRLLIKKK IHALQQRE+ EEG WHDLVAKGFIEY+D
Sbjct: 622 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 681
Query: 2010 XXXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2189
DL+ AR NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 682 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 741
Query: 2190 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2369
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 742 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 801
Query: 2370 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDG 2549
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRHGSYDKLDDDG
Sbjct: 802 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 861
Query: 2550 LAPPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNAD 2729
LAPPGTRVSGEDVIIGKTTPIAQ++AQGQ+ARYTRRDHS SLRHSE+G+VDQVLLTTNAD
Sbjct: 862 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 921
Query: 2730 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 2909
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 922 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 981
Query: 2910 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3089
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 982 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1041
Query: 3090 RLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3269
RL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1042 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1101
Query: 3270 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3449
AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1102 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1161
Query: 3450 KLLFQELMAMAIAPRMLT 3503
KLLFQELMAMAIAPRMLT
Sbjct: 1162 KLLFQELMAMAIAPRMLT 1179
>XP_002519060.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ricinus
communis] EEF43271.1 DNA-directed RNA polymerase II
subunit, putative [Ricinus communis]
Length = 1194
Score = 2137 bits (5537), Expect = 0.0
Identities = 1061/1158 (91%), Positives = 1093/1158 (94%), Gaps = 22/1158 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+IYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+I+KGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
EEVTETQDFTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS MFVRMLSR SAK GSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 262
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIRTEIPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKA+YFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 442
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEEW TENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 562
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQATKIFVNGCWVGIHR+PD+LVKT +DVNTEVGV+RDIRLKELR+YTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEG-WHDLVAKGFIEYVDXXXXXXXXXX 2009
YGRCSRPLFIV++QRLLIKKK IHALQQRE+ EEG WHDLVAKGFIEY+D
Sbjct: 623 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 682
Query: 2010 XXXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2189
DL+ AR NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTIHDLVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 2190 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2369
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 2370 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDG 2549
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 862
Query: 2550 LAPPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNAD 2729
LAPPGTRVSGEDVIIGKTTPIAQ++AQGQ+ARYTRRDHS SLRHSE+G+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 2730 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 2909
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 982
Query: 2910 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3089
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 3090 RLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3269
RL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 3270 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3449
AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1162
Query: 3450 KLLFQELMAMAIAPRMLT 3503
KLLFQELMAMAIAPRMLT
Sbjct: 1163 KLLFQELMAMAIAPRMLT 1180
>XP_006859038.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Amborella
trichopoda] ERN20505.1 hypothetical protein
AMTR_s00068p00181410 [Amborella trichopoda]
Length = 1190
Score = 2136 bits (5534), Expect = 0.0
Identities = 1057/1157 (91%), Positives = 1091/1157 (94%), Gaps = 21/1157 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYF+EKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ+D
Sbjct: 16 ITQEDAWAVISAYFDEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAD 75
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
F E+IYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+I+KGHD
Sbjct: 76 FVETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 135
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
EE+ E Q+ TKVFIGKVPIMLRSSYCT++QNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 136 HEELAEQQELTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVL 195
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QN+PPS MFVRMLSR S+K GSSGQY
Sbjct: 196 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNKPPSSMFVRMLSRTSSKGGSSGQY 255
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIR EIPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 256 IRATLPYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 315
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRGSTVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKA+YFGYIIHRLL+C
Sbjct: 316 VALDYIGKRGSTVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLVC 375
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGK+VNLQFAI
Sbjct: 376 ALGRRPEDDRDHYGNKRLDLAGPLLGSLFRTMFRKLTRDVRSYVQKCVDNGKEVNLQFAI 435
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA
Sbjct: 436 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 495
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI
Sbjct: 496 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 555
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQATKIFVNGCWVGIHRNP+LLVKT +DVNTEVGVIRDIRLKELRLYTD
Sbjct: 556 SPAVIPQATKIFVNGCWVGIHRNPELLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTD 615
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEGWHDLVAKGFIEYVDXXXXXXXXXXX 2012
YGRCSRPLFIV++QRLLIKK I ALQQRE+ +EGWHDLVAKGFIEYVD
Sbjct: 616 YGRCSRPLFIVEKQRLLIKKSDIRALQQRESPDEGWHDLVAKGFIEYVDTEEEETTMISM 675
Query: 2013 XXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2192
DL+SAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 676 TISDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 735
Query: 2193 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2372
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDS
Sbjct: 736 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDS 795
Query: 2373 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDGL 2552
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRE+TMGMRHGSYDKLDDDGL
Sbjct: 796 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 855
Query: 2553 APPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNADG 2732
APPGTRVSGEDVIIGKTTPI Q++ QGQA+RYTRRDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 856 APPGTRVSGEDVIIGKTTPITQEEMQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADG 915
Query: 2733 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSR 2912
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 916 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 975
Query: 2913 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3092
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR
Sbjct: 976 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 1035
Query: 3093 LPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3272
L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1036 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1095
Query: 3273 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3452
HGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDI+QVHIPYACK
Sbjct: 1096 HGAAHFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNKTDIIQVHIPYACK 1155
Query: 3453 LLFQELMAMAIAPRMLT 3503
LLFQELMAMAIAPRM T
Sbjct: 1156 LLFQELMAMAIAPRMFT 1172
>AAZ08457.1 RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 2136 bits (5534), Expect = 0.0
Identities = 1059/1158 (91%), Positives = 1093/1158 (94%), Gaps = 22/1158 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+IYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+I+KGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
EEVTETQDFTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS MFVRMLSR SAK GSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIRTEIPIIIVFRALGFVADK+ILEHICYDFADTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 319
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKA+YFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 379
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 439
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEEW TENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQATKIFVNGCWVGIHR+PD+LV+T +DVNTEVGV+RDIRLKELR+YTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEG-WHDLVAKGFIEYVDXXXXXXXXXX 2009
YGRCSRPLFIV++QRLLIK+K I ALQQRET E+G WHDLVAKGFIEY+D
Sbjct: 620 YGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 2010 XXXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2189
DL+SAR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 2190 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2369
MGIYVTNYQ RMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 2370 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDG 2549
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 2550 LAPPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNAD 2729
LAPPGTRVSGEDV+IGKTTPIAQD+AQG AARYTRRDHSTSLRHSE+GMVDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVVIGKTTPIAQDEAQGPAARYTRRDHSTSLRHSETGMVDQVLLTTNAD 919
Query: 2730 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 2909
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTMEGITPDIIVNPHAIPS 979
Query: 2910 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3089
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1039
Query: 3090 RLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3269
RL +MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLTSMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 3270 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3449
AHGAAHFLKERLFDQSDAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 3450 KLLFQELMAMAIAPRMLT 3503
KLLFQELM+MAIAPRMLT
Sbjct: 1160 KLLFQELMSMAIAPRMLT 1177
>OAY26185.1 hypothetical protein MANES_16G027100 [Manihot esculenta]
Length = 1192
Score = 2135 bits (5532), Expect = 0.0
Identities = 1059/1158 (91%), Positives = 1092/1158 (94%), Gaps = 22/1158 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 21 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 80
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+IYKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+I+KGHD
Sbjct: 81 FAETIYKICFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 140
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
EEVTETQDFTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 141 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 200
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS MFVRMLSR SAK GSSGQY
Sbjct: 201 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 260
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIRTEIPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 261 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 320
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKA+YFGYIIHRLLLC
Sbjct: 321 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 380
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 381 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 440
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 441 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 500
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEEW TENFEEI
Sbjct: 501 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 560
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQATKIFVNGCWVGIHRNPD+LVKT +DVNTEVGV+RDIRLKELR+YTD
Sbjct: 561 SPAVIPQATKIFVNGCWVGIHRNPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 620
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEG-WHDLVAKGFIEYVDXXXXXXXXXX 2009
YGRCSRPLFIV++QRLLIKKK IHALQQRE+ EEG WHDLVAKGFIEY+D
Sbjct: 621 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMIS 680
Query: 2010 XXXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2189
DL+ AR NPEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 681 MTIHDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 740
Query: 2190 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2369
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 741 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 800
Query: 2370 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDG 2549
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRHGSYDKLDDDG
Sbjct: 801 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 860
Query: 2550 LAPPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNAD 2729
LAPPGTRVSGEDVIIGKTTPI+Q+DAQGQ+ARYTRRDHS SLRHSE+G+VDQVLLTTNAD
Sbjct: 861 LAPPGTRVSGEDVIIGKTTPISQEDAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNAD 920
Query: 2730 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 2909
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 921 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 980
Query: 2910 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3089
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 981 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1040
Query: 3090 RLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3269
RL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1041 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1100
Query: 3270 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3449
AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1101 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1160
Query: 3450 KLLFQELMAMAIAPRMLT 3503
KLLFQELMAMAIAPRMLT
Sbjct: 1161 KLLFQELMAMAIAPRMLT 1178
>XP_010920288.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB2 [Elaeis guineensis]
Length = 1187
Score = 2133 bits (5528), Expect = 0.0
Identities = 1056/1157 (91%), Positives = 1090/1157 (94%), Gaps = 21/1157 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPGRQSD
Sbjct: 17 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANIEIRPESQHNPGRQSD 76
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
F E+IYKISFGQIYLS+PMMTESDGETATLFPKAARLRNLTYSAPLYVDVTK++I+KGHD
Sbjct: 77 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKVIKKGHD 136
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
CEEVTETQ+F KVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 137 CEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 196
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSM E+Q+RP S MFVRMLSR SAK GSSGQY
Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVRMLSRTSAKGGSSGQY 256
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIR +IPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 257 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGE+CETKKA+YFGYIIHRLLLC
Sbjct: 317 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 376
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 377 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 437 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWGTENFEEI 556
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQA+KIFVNG WVGIHRNPDLLV+T IDVNTEVGV+RDIRLKELRLYTD
Sbjct: 557 SPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 616
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEGWHDLVAKGFIEYVDXXXXXXXXXXX 2012
YGRCSRPLFIV+ QRLLIKKK I ALQQRE+ EEGWHDLVAKGFIEY+D
Sbjct: 617 YGRCSRPLFIVENQRLLIKKKDIQALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMIAM 676
Query: 2013 XXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2192
DL++AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 677 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736
Query: 2193 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2372
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 737 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 796
Query: 2373 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDGL 2552
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRE+TMGMRHGSYDKLDDDGL
Sbjct: 797 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 856
Query: 2553 APPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNADG 2732
APPGTRVSGEDVIIGKT+PI QDD+QGQA+RYTRRDHSTS+RHSESGMVDQVLLTTNADG
Sbjct: 857 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVDQVLLTTNADG 916
Query: 2733 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSR 2912
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 917 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 976
Query: 2913 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3092
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 977 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1036
Query: 3093 LPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3272
L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1037 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1096
Query: 3273 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3452
HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1097 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1156
Query: 3453 LLFQELMAMAIAPRMLT 3503
LLFQELMAMAIAPRM T
Sbjct: 1157 LLFQELMAMAIAPRMFT 1173
>XP_015690688.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
[Oryza brachyantha] XP_015690689.1 PREDICTED:
DNA-directed RNA polymerase II subunit RPB2 isoform X3
[Oryza brachyantha]
Length = 1219
Score = 2132 bits (5525), Expect = 0.0
Identities = 1052/1157 (90%), Positives = 1089/1157 (94%), Gaps = 21/1157 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 51 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 110
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+++KISFGQIYLSKPMMTE+DGETATLFPK+ARLRNLTYSAPLYVDV+ R+++KGHD
Sbjct: 111 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 170
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
CEEVTET ++ KVFIGKVPIMLRSSYCT++Q SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 171 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 230
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE QNRP S MFVRMLSRA AK GSSGQY
Sbjct: 231 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 290
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIR +IPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 291 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 350
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGE+CETKKA+YFGYIIHRLL+C
Sbjct: 351 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 410
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGK+VNLQFAI
Sbjct: 411 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 470
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 471 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 530
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEW TENFEEI
Sbjct: 531 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 590
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQA KIFVNGCWVGIHRNPDLLVKT IDVNTEVGV+RDIRLKELRLYTD
Sbjct: 591 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 650
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEGWHDLVAKGFIEYVDXXXXXXXXXXX 2012
YGRCSRPLFIV+ QRLLIKKKHI ALQQRET EEGWHDLVAKGFIEY+D
Sbjct: 651 YGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 710
Query: 2013 XXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2192
DL++ARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 711 TINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 770
Query: 2193 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2372
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 771 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 830
Query: 2373 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDGL 2552
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRE+TMGMRHGSYDKLDDDGL
Sbjct: 831 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 890
Query: 2553 APPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNADG 2732
APPGTRVSGEDVIIGKT+PI QDDAQGQA RYT+RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 891 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 950
Query: 2733 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSR 2912
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 951 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 1010
Query: 2913 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3092
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 1011 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1070
Query: 3093 LPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3272
L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1071 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1130
Query: 3273 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3452
HGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1131 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1190
Query: 3453 LLFQELMAMAIAPRMLT 3503
LLFQELMAMAIAPRMLT
Sbjct: 1191 LLFQELMAMAIAPRMLT 1207
>XP_006650345.2 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Oryza brachyantha]
Length = 1254
Score = 2132 bits (5525), Expect = 0.0
Identities = 1052/1157 (90%), Positives = 1089/1157 (94%), Gaps = 21/1157 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 86 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 145
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+++KISFGQIYLSKPMMTE+DGETATLFPK+ARLRNLTYSAPLYVDV+ R+++KGHD
Sbjct: 146 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 205
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
CEEVTET ++ KVFIGKVPIMLRSSYCT++Q SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 206 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 265
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE QNRP S MFVRMLSRA AK GSSGQY
Sbjct: 266 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 325
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIR +IPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 326 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 385
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGE+CETKKA+YFGYIIHRLL+C
Sbjct: 386 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 445
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGK+VNLQFAI
Sbjct: 446 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 505
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 506 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 565
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEW TENFEEI
Sbjct: 566 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 625
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQA KIFVNGCWVGIHRNPDLLVKT IDVNTEVGV+RDIRLKELRLYTD
Sbjct: 626 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 685
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEGWHDLVAKGFIEYVDXXXXXXXXXXX 2012
YGRCSRPLFIV+ QRLLIKKKHI ALQQRET EEGWHDLVAKGFIEY+D
Sbjct: 686 YGRCSRPLFIVENQRLLIKKKHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 745
Query: 2013 XXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2192
DL++ARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 746 TINDLVNARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 805
Query: 2193 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2372
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 806 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 865
Query: 2373 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDGL 2552
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRE+TMGMRHGSYDKLDDDGL
Sbjct: 866 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 925
Query: 2553 APPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNADG 2732
APPGTRVSGEDVIIGKT+PI QDDAQGQA RYT+RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 926 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 985
Query: 2733 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSR 2912
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 986 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 1045
Query: 2913 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3092
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 1046 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1105
Query: 3093 LPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3272
L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1106 LSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1165
Query: 3273 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3452
HGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1166 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1225
Query: 3453 LLFQELMAMAIAPRMLT 3503
LLFQELMAMAIAPRMLT
Sbjct: 1226 LLFQELMAMAIAPRMLT 1242
>XP_012449722.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
raimondii] XP_012449723.1 PREDICTED: DNA-directed RNA
polymerase II subunit RPB2 [Gossypium raimondii]
XP_017641873.1 PREDICTED: DNA-directed RNA polymerase II
subunit RPB2 [Gossypium arboreum] XP_017641874.1
PREDICTED: DNA-directed RNA polymerase II subunit RPB2
[Gossypium arboreum] KHG27061.1 DNA-directed RNA
polymerase II subunit RPB2 [Gossypium arboreum]
KJB68623.1 hypothetical protein B456_010G255400
[Gossypium raimondii] KJB68624.1 hypothetical protein
B456_010G255400 [Gossypium raimondii]
Length = 1189
Score = 2132 bits (5524), Expect = 0.0
Identities = 1057/1158 (91%), Positives = 1092/1158 (94%), Gaps = 22/1158 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+IYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+I+KGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
EEVTETQDFTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS MFVRMLSR SAK GSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIRTEIPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGE+CETKKA+YFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 379
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEEW TENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQATKIFVNGCWVG+HRNPD+LV T +DVNTEVGV+RDIRLKELR+YTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEG-WHDLVAKGFIEYVDXXXXXXXXXX 2009
YGRCSRPLFIV++QRLLIKKK IHALQQRET E+G WHDLVAKGFIEY+D
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 2010 XXXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2189
DL+ AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 2190 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2369
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 2370 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDG 2549
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRATTMGMRHGSYDKLDDDG 859
Query: 2550 LAPPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNAD 2729
LAPPGTRVSGEDVIIGKTTPI+Q++AQGQA+RY++RDHS SLRHSE+G+VDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSKRDHSISLRHSETGIVDQVLLTTNAD 919
Query: 2730 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 2909
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 2910 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3089
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1039
Query: 3090 RLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3269
RL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 3270 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3449
AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1159
Query: 3450 KLLFQELMAMAIAPRMLT 3503
KLLFQELMAMAIAPRMLT
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177
>XP_008801262.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Phoenix
dactylifera]
Length = 1187
Score = 2132 bits (5523), Expect = 0.0
Identities = 1053/1157 (91%), Positives = 1090/1157 (94%), Gaps = 21/1157 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESA+IEIRPESQHNPGRQSD
Sbjct: 17 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESANIEIRPESQHNPGRQSD 76
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
F E+IYKISFGQIYLS+PMMTESDGETATLFPKAARLRNLTYSAPLYVDVTK++I+KGHD
Sbjct: 77 FVETIYKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKKVIKKGHD 136
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
CEEVTETQ+F KVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 137 CEEVTETQEFPKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 196
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSM E+Q+RP S MFVRMLSR SAK GSSGQY
Sbjct: 197 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMPESQSRPASTMFVRMLSRTSAKGGSSGQY 256
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIR +IPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 257 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 316
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGE+CETKKA+YFGYIIHRLLLC
Sbjct: 317 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 376
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 377 ALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 436
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQAN AG RAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 437 KAKTITSGLKYSLATGNWGQANQAGARAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 496
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 497 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWGTENFEEI 556
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQA+KIFVNG WVGIHRNPDLLV+T IDVNTEVGV+RDIRLKELRLYTD
Sbjct: 557 SPAVIPQASKIFVNGSWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 616
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEGWHDLVAKGFIEYVDXXXXXXXXXXX 2012
YGRCSRPLFIV+ QRLLIKK+HI ALQQRE+ EEGWHDLVAKGFIEY+D
Sbjct: 617 YGRCSRPLFIVENQRLLIKKRHIQALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMIAM 676
Query: 2013 XXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2192
DL++AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 677 TINDLVNARQNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 736
Query: 2193 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2372
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 737 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 796
Query: 2373 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDGL 2552
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRE+TMGMRHGSYDKLDDDGL
Sbjct: 797 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 856
Query: 2553 APPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNADG 2732
APPGTRVSGEDVIIGKT+PI QDD+QGQA+RYTRRDHSTS+RHSESGMVDQVLLTTNADG
Sbjct: 857 APPGTRVSGEDVIIGKTSPIPQDDSQGQASRYTRRDHSTSVRHSESGMVDQVLLTTNADG 916
Query: 2733 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSR 2912
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 917 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSR 976
Query: 2913 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3092
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 977 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1036
Query: 3093 LPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3272
L AMIF+GPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1037 LTAMIFIGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1096
Query: 3273 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3452
HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1097 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1156
Query: 3453 LLFQELMAMAIAPRMLT 3503
LLFQELMAMAIAPRM +
Sbjct: 1157 LLFQELMAMAIAPRMFS 1173
>XP_016179997.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Arachis
ipaensis]
Length = 1194
Score = 2130 bits (5519), Expect = 0.0
Identities = 1055/1158 (91%), Positives = 1095/1158 (94%), Gaps = 22/1158 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 23 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 82
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+IYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+I+KGHD
Sbjct: 83 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 142
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
EEVTETQDFTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 143 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 202
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS MFVRMLSRAS+K GSSGQY
Sbjct: 203 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRASSKGGSSGQY 262
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIR+EIPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 263 IRATLPYIRSEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 322
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGEYCETKKA+YFGYIIHRLLLC
Sbjct: 323 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLC 382
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 383 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAI 442
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 443 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 502
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA+PILEFLEEW TENFEEI
Sbjct: 503 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAASPILEFLEEWGTENFEEI 562
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQATKIFVNGCWVGIHR+PD+LV+T +DVNTEVGV+RDIRLKELR+YTD
Sbjct: 563 SPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTD 622
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEG-WHDLVAKGFIEYVDXXXXXXXXXX 2009
YGRCSRPLFIVD+QRLLIKKK IHALQQRE+ EEG WHDLV+KGFIEY+D
Sbjct: 623 YGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMIS 682
Query: 2010 XXXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2189
DL+ AR NPEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 683 MTINDLVQARLNPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 742
Query: 2190 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2369
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 743 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 802
Query: 2370 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDG 2549
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRHGSYDKLDDDG
Sbjct: 803 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDG 862
Query: 2550 LAPPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNAD 2729
LAPPGTRVSGEDVIIGKTTPI+Q++AQGQAARYTRRDHS SLRHSE+G+VDQVLLTTNAD
Sbjct: 863 LAPPGTRVSGEDVIIGKTTPISQEEAQGQAARYTRRDHSISLRHSETGIVDQVLLTTNAD 922
Query: 2730 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 2909
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI+PDIIVNPHAIPS
Sbjct: 923 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGISPDIIVNPHAIPS 982
Query: 2910 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3089
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 983 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1042
Query: 3090 RLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3269
RL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1043 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1102
Query: 3270 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3449
AHGAAHFLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQV+IPYAC
Sbjct: 1103 AHGAAHFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYAC 1162
Query: 3450 KLLFQELMAMAIAPRMLT 3503
KLLFQELMAMAIAPRMLT
Sbjct: 1163 KLLFQELMAMAIAPRMLT 1180
>XP_011027835.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Populus
euphratica]
Length = 1198
Score = 2130 bits (5519), Expect = 0.0
Identities = 1058/1158 (91%), Positives = 1091/1158 (94%), Gaps = 22/1158 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 27 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 86
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+IYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+I+KGHD
Sbjct: 87 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 146
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
EEVTETQDFTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 147 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 206
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYV EVRSMAE+QNRPPS MFVRMLSR SAK GSSGQY
Sbjct: 207 IAQEKMSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 266
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIRTEIPIIIVFRALGFVADK+ILEHICYDFADTQMMELLRPSLEEAFVIQNQQ
Sbjct: 267 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 326
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGE+CETKKA+YFGYIIHRLLLC
Sbjct: 327 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 386
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 387 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 446
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 447 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 506
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEEW TENFEEI
Sbjct: 507 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 566
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQATKIFVNG WVGIHR+PD+LVKT +DVNTEVGV+RDIRLKELR+YTD
Sbjct: 567 SPAVIPQATKIFVNGGWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 626
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEG-WHDLVAKGFIEYVDXXXXXXXXXX 2009
YGRCSRPLFIV++Q+LLI+KK IHALQQRET +EG WHDLV+KGFIEY+D
Sbjct: 627 YGRCSRPLFIVEKQKLLIRKKDIHALQQRETPDEGGWHDLVSKGFIEYIDTEEEETTMIS 686
Query: 2010 XXXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2189
DL+ AR NPEEAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 687 MTIHDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 746
Query: 2190 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2369
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 747 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 806
Query: 2370 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDG 2549
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRHGSYDKLDDDG
Sbjct: 807 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDG 866
Query: 2550 LAPPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNAD 2729
LAPPGTRVSGEDVIIGKTTPIAQ++AQGQ+ARYTRRDHS SLRHSE+GMVDQVLLTTNAD
Sbjct: 867 LAPPGTRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGMVDQVLLTTNAD 926
Query: 2730 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 2909
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 927 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 986
Query: 2910 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3089
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR
Sbjct: 987 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 1046
Query: 3090 RLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3269
RL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1047 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1106
Query: 3270 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3449
AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC
Sbjct: 1107 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 1166
Query: 3450 KLLFQELMAMAIAPRMLT 3503
KLLFQELMAMAIAPRMLT
Sbjct: 1167 KLLFQELMAMAIAPRMLT 1184
>EEE59590.1 hypothetical protein OsJ_11898 [Oryza sativa Japonica Group]
Length = 1218
Score = 2130 bits (5519), Expect = 0.0
Identities = 1051/1157 (90%), Positives = 1088/1157 (94%), Gaps = 21/1157 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 50 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 109
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+++KISFGQIYLSKPMMTE+DGETATLFPK+ARLRNLTYSAPLYVDV+ R+++KGHD
Sbjct: 110 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 169
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
CEEVTET ++ KVFIGKVPIMLRSSYCT++Q SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 170 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 229
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE QNRP S MFVRMLSRA AK GSSGQY
Sbjct: 230 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 289
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIR +IPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 290 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 349
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETKKA+YFGYIIHRLL+C
Sbjct: 350 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 409
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGK+VNLQFAI
Sbjct: 410 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 469
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 470 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 529
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEW TENFEEI
Sbjct: 530 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 589
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQA KIFVNGCWVGIHRNPDLLVKT IDVNTEVGV+RDIRLKELRLYTD
Sbjct: 590 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 649
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEGWHDLVAKGFIEYVDXXXXXXXXXXX 2012
YGRCSRPLFIV+ QRLLIKK+HI ALQQRET EEGWHDLVAKGFIEY+D
Sbjct: 650 YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 709
Query: 2013 XXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2192
DLI ARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 710 TINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 769
Query: 2193 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2372
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 770 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 829
Query: 2373 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDGL 2552
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRE+TMGMRHGSYDKLDDDGL
Sbjct: 830 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 889
Query: 2553 APPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNADG 2732
APPGTRVSGEDVIIGKT+PI QDDAQGQA RYT+RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 890 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 949
Query: 2733 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSR 2912
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 950 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 1009
Query: 2913 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3092
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 1010 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1069
Query: 3093 LPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3272
L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1070 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1129
Query: 3273 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3452
HGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1130 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1189
Query: 3453 LLFQELMAMAIAPRMLT 3503
LLFQELMAMAIAPRMLT
Sbjct: 1190 LLFQELMAMAIAPRMLT 1206
>XP_015631661.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Oryza sativa
Japonica Group] ABF97884.1 DNA-directed RNA polymerase II
135 kDa polypeptide, putative, expressed [Oryza sativa
Japonica Group] EAY91202.1 hypothetical protein OsI_12811
[Oryza sativa Indica Group]
Length = 1222
Score = 2130 bits (5519), Expect = 0.0
Identities = 1051/1157 (90%), Positives = 1088/1157 (94%), Gaps = 21/1157 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQ++
Sbjct: 54 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAE 113
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+++KISFGQIYLSKPMMTE+DGETATLFPK+ARLRNLTYSAPLYVDV+ R+++KGHD
Sbjct: 114 FAETLHKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHD 173
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
CEEVTET ++ KVFIGKVPIMLRSSYCT++Q SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 174 CEEVTETMEYPKVFIGKVPIMLRSSYCTLFQQSEKDLTELGECPYDQGGYFIINGSEKVL 233
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE QNRP S MFVRMLSRA AK GSSGQY
Sbjct: 234 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQY 293
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIR +IPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 294 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 353
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVT+EKRIKYA+EILQKEMLPHVGVGE+CETKKA+YFGYIIHRLL+C
Sbjct: 354 VALDYIGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMC 413
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGK+VNLQFAI
Sbjct: 414 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 473
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 474 KAKTITSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 533
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEW TENFEEI
Sbjct: 534 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 593
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQA KIFVNGCWVGIHRNPDLLVKT IDVNTEVGV+RDIRLKELRLYTD
Sbjct: 594 SPAVIPQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 653
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEGWHDLVAKGFIEYVDXXXXXXXXXXX 2012
YGRCSRPLFIV+ QRLLIKK+HI ALQQRET EEGWHDLVAKGFIEY+D
Sbjct: 654 YGRCSRPLFIVENQRLLIKKRHIRALQQRETPEEGWHDLVAKGFIEYIDTEEEETTMISM 713
Query: 2013 XXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2192
DLI ARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 714 TINDLIGARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 773
Query: 2193 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2372
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 774 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 833
Query: 2373 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDGL 2552
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKE+FGRPNRE+TMGMRHGSYDKLDDDGL
Sbjct: 834 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGL 893
Query: 2553 APPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNADG 2732
APPGTRVSGEDVIIGKT+PI QDDAQGQA RYT+RDHSTSLRHSESGMVDQVLLTTNADG
Sbjct: 894 APPGTRVSGEDVIIGKTSPIPQDDAQGQATRYTKRDHSTSLRHSESGMVDQVLLTTNADG 953
Query: 2733 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSR 2912
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 954 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 1013
Query: 2913 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3092
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 1014 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1073
Query: 3093 LPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3272
L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1074 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1133
Query: 3273 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3452
HGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1134 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1193
Query: 3453 LLFQELMAMAIAPRMLT 3503
LLFQELMAMAIAPRMLT
Sbjct: 1194 LLFQELMAMAIAPRMLT 1210
>XP_020094305.1 DNA-directed RNA polymerase II subunit RPB2 [Ananas comosus]
OAY64594.1 DNA-directed RNA polymerase II subunit RPB2
[Ananas comosus]
Length = 1187
Score = 2129 bits (5517), Expect = 0.0
Identities = 1050/1157 (90%), Positives = 1089/1157 (94%), Gaps = 21/1157 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQS+
Sbjct: 19 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSE 78
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
F+E+++KISFGQIYLS+PMMTESDGETATLFPKAARLRNLTYSAPLYVDVT R+++KGHD
Sbjct: 79 FSETLHKISFGQIYLSRPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTYRVVKKGHD 138
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
CEEVTETQ++ KVFIGKVPIMLRSSYCT+YQ SEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 139 CEEVTETQEYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVL 198
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE QNRP S MFVRMLSR SAK GSSGQY
Sbjct: 199 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAENQNRPASSMFVRMLSRTSAKGGSSGQY 258
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIR +IPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 259 IRATLPYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 318
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVGE+CETKKA+YFGYIIHRLLLC
Sbjct: 319 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLC 378
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
A+GRR EDDRDHYGNKRLDLAGP DNGK+VNLQFAI
Sbjct: 379 AIGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAI 438
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKT+TSGLKYSLATGNWGQAN AGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 439 KAKTVTSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 498
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEW TENFEEI
Sbjct: 499 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEI 558
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQA KIFVNGCWVGIHRNPDLLV+T IDVNTEVGV+RDIRLKELRLYTD
Sbjct: 559 SPAVIPQAAKIFVNGCWVGIHRNPDLLVRTLRRLRRQIDVNTEVGVVRDIRLKELRLYTD 618
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEGWHDLVAKGFIEYVDXXXXXXXXXXX 2012
YGRCSRPLFIV+ QRLLIKKK I ALQQRE+ EEGWHDLVAKGFIEY+D
Sbjct: 619 YGRCSRPLFIVENQRLLIKKKDIRALQQRESPEEGWHDLVAKGFIEYIDTEEEETTMISM 678
Query: 2013 XXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 2192
DL++AR NP+EAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM
Sbjct: 679 TINDLVNARQNPDEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAM 738
Query: 2193 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 2372
GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS
Sbjct: 739 GIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDS 798
Query: 2373 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDGL 2552
VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRE+TMGMRHGSYDKLDDDGL
Sbjct: 799 VIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGL 858
Query: 2553 APPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNADG 2732
APPGTRVSGEDVIIGKT+PI+QDD+QGQA+RYTRRDHST LRHSESGMVDQVLLTTNADG
Sbjct: 859 APPGTRVSGEDVIIGKTSPISQDDSQGQASRYTRRDHSTCLRHSESGMVDQVLLTTNADG 918
Query: 2733 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPSR 2912
LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSR
Sbjct: 919 LRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSR 978
Query: 2913 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRR 3092
MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR+
Sbjct: 979 MTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRK 1038
Query: 3093 LPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 3272
L AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA
Sbjct: 1039 LTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIA 1098
Query: 3273 HGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 3452
HGAA FLKERLFDQSDAYRVHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK
Sbjct: 1099 HGAAFFLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACK 1158
Query: 3453 LLFQELMAMAIAPRMLT 3503
LLFQELMAMAIAPRMLT
Sbjct: 1159 LLFQELMAMAIAPRMLT 1175
>XP_007025631.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Theobroma
cacao] EOY28253.1 DNA-directed RNA polymerase family
protein isoform 1 [Theobroma cacao]
Length = 1189
Score = 2128 bits (5514), Expect = 0.0
Identities = 1055/1158 (91%), Positives = 1092/1158 (94%), Gaps = 22/1158 (1%)
Frame = +3
Query: 96 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQSD 275
ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSD
Sbjct: 20 ITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSD 79
Query: 276 FAESIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRIIRKGHD 455
FAE+IYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKR+I+KGHD
Sbjct: 80 FAETIYKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHD 139
Query: 456 CEEVTETQDFTKVFIGKVPIMLRSSYCTVYQNSEKDLTELGECPYDQGGYFIINGSEKVL 635
EEVTETQDFTKVFIGKVPIMLRSSYCT+YQNSEKDLTELGECPYDQGGYFIINGSEKVL
Sbjct: 140 GEEVTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVL 199
Query: 636 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAETQNRPPSGMFVRMLSRASAKAGSSGQY 815
IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAE+QNRPPS MFVRMLSR SAK GSSGQY
Sbjct: 200 IAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQY 259
Query: 816 IRATLPYIRTEIPIIIVFRALGFVADKEILEHICYDFADTQMMELLRPSLEEAFVIQNQQ 995
IRATLPYIRTEIPIIIVFRALGFVADK+ILEHICYDF+DTQMMELLRPSLEEAFVIQNQQ
Sbjct: 260 IRATLPYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQ 319
Query: 996 VALDYIGKRGSTVGVTREKRIKYAREILQKEMLPHVGVGEYCETKKAFYFGYIIHRLLLC 1175
VALDYIGKRG+TVGVTREKRIKYA+EILQKEMLPHVGVG++CETKKA+YFGYIIHRLLLC
Sbjct: 320 VALDYIGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLC 379
Query: 1176 ALGRRQEDDRDHYGNKRLDLAGPXXXX---------------------DNGKDVNLQFAI 1292
ALGRR EDDRDHYGNKRLDLAGP DNGKDVNLQFAI
Sbjct: 380 ALGRRAEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAI 439
Query: 1293 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLA 1472
KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLA
Sbjct: 440 KAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLA 499
Query: 1473 KPRQLHNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTENFEEI 1652
KPRQLHNS WGMMCPAETPEGQACGLVKNLALMVYITVGSAA PILEFLEEW TENFEEI
Sbjct: 500 KPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEI 559
Query: 1653 SAAVIPQATKIFVNGCWVGIHRNPDLLVKTXXXXXXXIDVNTEVGVIRDIRLKELRLYTD 1832
S AVIPQATKIFVNGCWVG+HRNPD+LV T +DVNTEVGV+RDIRLKELR+YTD
Sbjct: 560 SPAVIPQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTD 619
Query: 1833 YGRCSRPLFIVDQQRLLIKKKHIHALQQRETQEEG-WHDLVAKGFIEYVDXXXXXXXXXX 2009
YGRCSRPLFIV++QRLLIKKK IHALQQRE+ E+G WHDLVAKGFIEY+D
Sbjct: 620 YGRCSRPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMIS 679
Query: 2010 XXXXDLISARHNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 2189
DL+ AR NPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 680 MTINDLVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQA 739
Query: 2190 MGIYVTNYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 2369
MGIYVTNYQ RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED
Sbjct: 740 MGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQED 799
Query: 2370 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRESTMGMRHGSYDKLDDDG 2549
SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMRHGSYDKLDDDG
Sbjct: 800 SVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDG 859
Query: 2550 LAPPGTRVSGEDVIIGKTTPIAQDDAQGQAARYTRRDHSTSLRHSESGMVDQVLLTTNAD 2729
LAPPGTRVSGEDVIIGKTTPI+Q++AQGQA+RY+RRDHS SLRHSE+G+VDQVLLTTNAD
Sbjct: 860 LAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLRHSETGIVDQVLLTTNAD 919
Query: 2730 GLRFVKVRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTLEGITPDIIVNPHAIPS 2909
GLRFVKVR+RSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPS
Sbjct: 920 GLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPS 979
Query: 2910 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGR 3089
RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGR
Sbjct: 980 RMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGR 1039
Query: 3090 RLPAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 3269
RL AMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI
Sbjct: 1040 RLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMI 1099
Query: 3270 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYAC 3449
AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQV+IPYAC
Sbjct: 1100 AHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYAC 1159
Query: 3450 KLLFQELMAMAIAPRMLT 3503
KLLFQELMAMAIAPRMLT
Sbjct: 1160 KLLFQELMAMAIAPRMLT 1177