BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Magnolia22_contig00000869
         (1892 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_010266387.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   740   0.0  
XP_010275189.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   738   0.0  
OAY41811.1 hypothetical protein MANES_09G130800 [Manihot esculen...   728   0.0  
XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Rici...   720   0.0  
EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus c...   718   0.0  
XP_002325882.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Po...   714   0.0  
XP_011012457.1 PREDICTED: RNA polymerase sigma factor sigA [Popu...   714   0.0  
OAY44539.1 hypothetical protein MANES_08G159000 [Manihot esculenta]   714   0.0  
XP_012070278.1 PREDICTED: RNA polymerase sigma factor sigA [Jatr...   711   0.0  
XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isofo...   709   0.0  
KDO48032.1 hypothetical protein CISIN_1g010521mg [Citrus sinensi...   709   0.0  
OAY70832.1 RNA polymerase sigma factor sigA [Ananas comosus]          706   0.0  
EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao]                 706   0.0  
XP_020114871.1 RNA polymerase sigma factor sigA isoform X1 [Anan...   705   0.0  
XP_006484698.1 PREDICTED: RNA polymerase sigma factor sigA [Citr...   705   0.0  
XP_006437403.1 hypothetical protein CICLE_v10031289mg [Citrus cl...   705   0.0  
XP_008808794.1 PREDICTED: RNA polymerase sigma factor sigA [Phoe...   704   0.0  
OMO87271.1 RNA polymerase sigma-70 [Corchorus capsularis]             702   0.0  
XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   701   0.0  
XP_016671610.1 PREDICTED: RNA polymerase sigma factor sigA-like ...   700   0.0  

>XP_010266387.1 PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 506

 Score =  740 bits (1910), Expect = 0.0
 Identities = 376/507 (74%), Positives = 441/507 (86%), Gaps = 1/507 (0%)
 Frame = -3

Query: 1746 MATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGPG 1567
            MATAAVIGLSAGKRLL+S+FY SD+ D+L SV++ G+ Q+QA SAKNVIIA+KS+NFG  
Sbjct: 1    MATAAVIGLSAGKRLLNSTFYYSDVTDRLLSVYDHGLAQYQATSAKNVIIARKSSNFGDS 60

Query: 1566 VPSNRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSMLEK 1387
             PSN+H Q+I+ALKEHV+T S PST + W Q + LLE++    + S++ L+LLQK +LEK
Sbjct: 61   FPSNQHIQSIRALKEHVNTLSTPSTADVWLQSSGLLEEENTDLDYSVDALLLLQKFLLEK 120

Query: 1386 QWNISFDQAGTLDAPGG-VNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKHPR 1210
            QWN+SF+Q  T  APG   +KKIQ+T SG SARQRRT++RR  ++   S+M P++RK   
Sbjct: 121  QWNLSFEQTITDGAPGEETHKKIQVTRSGVSARQRRTSTRRTCLSPKHSIMQPTKRKQLG 180

Query: 1209 SIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEPSD 1030
            S++SPELL+    GYVKG+ S++LL+HAEV+ LSK IKAG+SLEEHK +L+ERLGC+PSD
Sbjct: 181  SMVSPELLKSHY-GYVKGVISEELLTHAEVVQLSKKIKAGLSLEEHKLRLKERLGCDPSD 239

Query: 1029 EQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGLIG 850
            EQL SSLR+SRAEL SK+IECSLARE+L M+NVRLVMSIAQKYDNMGAE+ADLVQGGLIG
Sbjct: 240  EQLASSLRISRAELQSKVIECSLAREKLTMSNVRLVMSIAQKYDNMGAEMADLVQGGLIG 299

Query: 849  LLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIRLE 670
            LLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERL LIRNAKIRL 
Sbjct: 300  LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLCLIRNAKIRLA 359

Query: 669  EKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADNNL 490
            EKGITPSID+IAE L MS+KKVRNATEA++KVFSLDREAFP+LNGLP ETLHSYIADN L
Sbjct: 360  EKGITPSIDRIAECLNMSEKKVRNATEAVNKVFSLDREAFPSLNGLPRETLHSYIADNRL 419

Query: 489  ENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRERV 310
            ENNPWHG DEWSLKDEVN L+STTL ERERDIIRLYYGLDKE  TWEDISR+ GLSRERV
Sbjct: 420  ENNPWHGVDEWSLKDEVNNLLSTTLEERERDIIRLYYGLDKECLTWEDISRRIGLSRERV 479

Query: 309  RQVGLVALEKLKHAARRRRLEAMLVKH 229
            RQVGLVALEKLKHAAR++RL+ MLVKH
Sbjct: 480  RQVGLVALEKLKHAARKKRLDTMLVKH 506


>XP_010275189.1 PREDICTED: RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
            XP_010275190.1 PREDICTED: RNA polymerase sigma factor
            sigA-like [Nelumbo nucifera] XP_010275191.1 PREDICTED:
            RNA polymerase sigma factor sigA-like [Nelumbo nucifera]
          Length = 516

 Score =  738 bits (1905), Expect = 0.0
 Identities = 376/513 (73%), Positives = 443/513 (86%), Gaps = 1/513 (0%)
 Frame = -3

Query: 1764 TVRSHMMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKS 1585
            T+RS  MATAAVIGL+AGKRLLSS+FY SD+ D+L SV++ G+ Q+Q A +K+V+IAKKS
Sbjct: 5    TLRSSSMATAAVIGLNAGKRLLSSTFYYSDVTDRLASVYDHGLAQYQTAPSKSVVIAKKS 64

Query: 1584 NNFGPGVPSNRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQ 1405
            +NF     SNRH Q+IKALKEH++T S  ST++ W Q +D LE+  +  + SLE L+LLQ
Sbjct: 65   SNFDHDFASNRHNQSIKALKEHLNTFST-STEDMWLQTSDHLEEGNSDLDYSLEALLLLQ 123

Query: 1404 KSMLEKQWNISFDQAGTLDAPGG-VNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPS 1228
            KS+LEKQWN+SF+++    AP     KKIQ+T SG SARQRRTN+R+K +N   S+M  +
Sbjct: 124  KSLLEKQWNLSFEKSMRKGAPKEETRKKIQVTRSGVSARQRRTNTRKKYLNTDSSMMQTT 183

Query: 1227 RRKHPRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERL 1048
            RR+H  S++S ELLQ RL GYVKG+ S++LL+H+EV+ LSK IK GISLEEHK +L+ERL
Sbjct: 184  RRRHLGSMVSEELLQSRLKGYVKGVISEELLTHSEVVQLSKKIKVGISLEEHKMRLKERL 243

Query: 1047 GCEPSDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLV 868
            GCEPSDEQL +SLR+SRAEL  KMIECSLARE++AM+NVRLVMSIA KYDNMGAE+ADLV
Sbjct: 244  GCEPSDEQLATSLRISRAELQMKMIECSLAREKIAMSNVRLVMSIAHKYDNMGAEMADLV 303

Query: 867  QGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRN 688
            QGGLIGLLRGIEKFDSSKG KISTYVYWWIRQGVS+ALV+NSRTLRLPSH+HERLSLIRN
Sbjct: 304  QGGLIGLLRGIEKFDSSKGCKISTYVYWWIRQGVSRALVENSRTLRLPSHMHERLSLIRN 363

Query: 687  AKIRLEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSY 508
            AKIRLEEKGITPSID+IAE L +SQKKVRNATEA++KV SLDREAFP+LNGLPGETLHSY
Sbjct: 364  AKIRLEEKGITPSIDRIAECLNISQKKVRNATEAVNKVISLDREAFPSLNGLPGETLHSY 423

Query: 507  IADNNLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFG 328
            IADN +ENNPWHG DEWSLKDEVN L++TTL ERERDIIRLYYGLD+E  TWEDISR+ G
Sbjct: 424  IADNRIENNPWHGVDEWSLKDEVNNLLNTTLRERERDIIRLYYGLDEECLTWEDISRRIG 483

Query: 327  LSRERVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            LSRERVRQVGLVALEKLKHAAR++RL+AMLVKH
Sbjct: 484  LSRERVRQVGLVALEKLKHAARKKRLDAMLVKH 516


>OAY41811.1 hypothetical protein MANES_09G130800 [Manihot esculenta] OAY41812.1
            hypothetical protein MANES_09G130800 [Manihot esculenta]
          Length = 509

 Score =  728 bits (1878), Expect = 0.0
 Identities = 377/509 (74%), Positives = 441/509 (86%), Gaps = 2/509 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MM TAAVIGLSAGKRLLSSSFY SDL DKLF+V++ G+T +Q AS KNVI AKKS+N+GP
Sbjct: 1    MMTTAAVIGLSAGKRLLSSSFYYSDLTDKLFNVNDHGLTHYQIASTKNVIGAKKSSNYGP 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
              PS NR+TQ+IKALKEHVDT+S  ST E+  +    +E+D +  + S+E L+LLQKSML
Sbjct: 61   TYPSSNRNTQSIKALKEHVDTASSSSTTETRFKTFHDIEEDISDLDYSVEALLLLQKSML 120

Query: 1392 EKQWNISFDQAGTLDAPGGVN-KKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQWN+SF++  + D+    + KKI +T SG SARQRR N+RRK + Q  + +  S  K 
Sbjct: 121  EKQWNLSFERTASSDSTNRKSEKKIPVTCSGLSARQRRINTRRKNLGQNKATVQASTFKQ 180

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             +S +SPELLQ RL GYVKG+ S++LL+HAEV+ LS+ IKAG+SLE+HKS+L+ERLGCEP
Sbjct: 181  LQSAVSPELLQNRLKGYVKGVVSEELLTHAEVVRLSRIIKAGLSLEDHKSRLKERLGCEP 240

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            SDEQL +SLR+SRAEL SK+I CSLARE+LAM+NVRLVMSIAQ+YD+MGAE+ADLVQGGL
Sbjct: 241  SDEQLATSLRISRAELQSKLIACSLAREKLAMSNVRLVMSIAQRYDHMGAEMADLVQGGL 300

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVDNSRTLRLP+HLHERL LIRNAKIR
Sbjct: 301  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIR 360

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKG+TPSID+IAESLKMSQKKVRNATEAISKVFSLDREAFP+LNGLPGET HSYIADN
Sbjct: 361  LEEKGVTPSIDRIAESLKMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
             L+NNPWH  DEW+LKDEVN+LI  TL ERER+IIRLYYGLD ES TWEDIS++ GLSRE
Sbjct: 421  CLDNNPWHVVDEWALKDEVNRLIDLTLREREREIIRLYYGLDNESLTWEDISKRIGLSRE 480

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            RVRQVGLVALEKLKHAAR+++LEAMLVKH
Sbjct: 481  RVRQVGLVALEKLKHAARKKKLEAMLVKH 509


>XP_002524027.2 PREDICTED: RNA polymerase sigma factor sigA [Ricinus communis]
          Length = 509

 Score =  720 bits (1859), Expect = 0.0
 Identities = 367/509 (72%), Positives = 441/509 (86%), Gaps = 2/509 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGLSAGKRLLSS+FY SDL +KL S +E G+T +Q  S K +I+AKKS+N+GP
Sbjct: 1    MMATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGP 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
              PS NR+TQ+IKALKEHVDT+S PST  +  +  + +E++ +  + S+E L+LLQKSML
Sbjct: 61   SFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSML 120

Query: 1392 EKQWNISFDQAGTLDAPGGVN-KKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQWN+SF++  + D+P   + KKI +T SG SARQRR N RRK ++Q+   +  +  K 
Sbjct: 121  EKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQ 180

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             +S +SPELLQ RL GYVKG+ S++LLSHAEV+ LS+ IKAG+SLE+HKS+L+ERLGC+P
Sbjct: 181  LKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDP 240

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            SDEQ+ +SL++SRAEL SK I CSLARE+LAM+NVRLVMSIAQ+YDNMGAE+ADLVQGGL
Sbjct: 241  SDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKG++ISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERL LIRNAKIR
Sbjct: 301  IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIR 360

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKG+TPSID+IAESL +SQKKVRNATEA+SKVFSLDREAFP+LNGLPGET HSYIADN
Sbjct: 361  LEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
             LENNPWHG D+W+LKDEVNKLI+ TL ERE++IIRLYYGLD ES TWEDIS++ GLSRE
Sbjct: 421  CLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRE 480

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            RVRQVGLVALEKLKHAAR+++LEAMLVKH
Sbjct: 481  RVRQVGLVALEKLKHAARKKKLEAMLVKH 509


>EEF38395.1 RNA polymerase sigma factor rpoD, putative [Ricinus communis]
          Length = 508

 Score =  718 bits (1854), Expect = 0.0
 Identities = 366/508 (72%), Positives = 440/508 (86%), Gaps = 2/508 (0%)
 Frame = -3

Query: 1746 MATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGPG 1567
            MATAAVIGLSAGKRLLSS+FY SDL +KL S +E G+T +Q  S K +I+AKKS+N+GP 
Sbjct: 1    MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPS 60

Query: 1566 VPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSMLE 1390
             PS NR+TQ+IKALKEHVDT+S PST  +  +  + +E++ +  + S+E L+LLQKSMLE
Sbjct: 61   FPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSMLE 120

Query: 1389 KQWNISFDQAGTLDAPGGVN-KKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKHP 1213
            KQWN+SF++  + D+P   + KKI +T SG SARQRR N RRK ++Q+   +  +  K  
Sbjct: 121  KQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQL 180

Query: 1212 RSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEPS 1033
            +S +SPELLQ RL GYVKG+ S++LLSHAEV+ LS+ IKAG+SLE+HKS+L+ERLGC+PS
Sbjct: 181  KSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPS 240

Query: 1032 DEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGLI 853
            DEQ+ +SL++SRAEL SK I CSLARE+LAM+NVRLVMSIAQ+YDNMGAE+ADLVQGGLI
Sbjct: 241  DEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 300

Query: 852  GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIRL 673
            GLLRGIEKFDSSKG++ISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERL LIRNAKIRL
Sbjct: 301  GLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRL 360

Query: 672  EEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADNN 493
            EEKG+TPSID+IAESL +SQKKVRNATEA+SKVFSLDREAFP+LNGLPGET HSYIADN 
Sbjct: 361  EEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADNC 420

Query: 492  LENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRER 313
            LENNPWHG D+W+LKDEVNKLI+ TL ERE++IIRLYYGLD ES TWEDIS++ GLSRER
Sbjct: 421  LENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRER 480

Query: 312  VRQVGLVALEKLKHAARRRRLEAMLVKH 229
            VRQVGLVALEKLKHAAR+++LEAMLVKH
Sbjct: 481  VRQVGLVALEKLKHAARKKKLEAMLVKH 508


>XP_002325882.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            EEF00264.1 RNA POLYMERASE SIGMA SUBUNIT 1 family protein
            [Populus trichocarpa]
          Length = 509

 Score =  714 bits (1844), Expect = 0.0
 Identities = 364/509 (71%), Positives = 433/509 (85%), Gaps = 2/509 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGLS+GKRLLSSSFY SDL +KL +V++ G+T +  A+ KNVI+AKKS+N+GP
Sbjct: 1    MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYGP 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
              PS NR++ +IKALKEHVDT+S  S   +W +  D  E++ +  + S+E L+LLQKSML
Sbjct: 61   SFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120

Query: 1392 EKQWNISFDQAGTLDAPGGVN-KKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQWN+SF++  + D+    N KKI +T SG SARQRR N+RRK  NQ+  +   S  K 
Sbjct: 121  EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKF 180

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             RS+ SP+LLQ RL GYVKG+ S ++L H EV+ LS+ I+AG+S E+HKS+L+ERLGCEP
Sbjct: 181  LRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEP 240

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            SDEQ+  SLR+SRA+L SK+I+CSLARE+LAM+NVRLVMSIAQKYDNMGAE+ADLVQGGL
Sbjct: 241  SDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGL 300

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVDNSRTLRLP+HLHERL LIRNAKIR
Sbjct: 301  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIR 360

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKG+TPSID+IAESL MSQ+KVRNATEAISKVFSLDREAFP+LNGLPGET HSYIADN
Sbjct: 361  LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
              ENNPWHG DEW+LK+EVNKLI +TL ERE++IIRLY+GLD+E  TWEDIS++ GLSRE
Sbjct: 421  RPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSRE 480

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            RVRQVGLVALEKLKHAAR+R  EAMLVKH
Sbjct: 481  RVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>XP_011012457.1 PREDICTED: RNA polymerase sigma factor sigA [Populus euphratica]
            XP_011012458.1 PREDICTED: RNA polymerase sigma factor
            sigA [Populus euphratica]
          Length = 509

 Score =  714 bits (1843), Expect = 0.0
 Identities = 364/509 (71%), Positives = 432/509 (84%), Gaps = 2/509 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGLS GKRLLSSSFY SDL +KL SV++ G+T    A+ KNV++AKKS+N+GP
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFYYSDLTEKLSSVNDHGITYCPTATTKNVVVAKKSSNYGP 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
              PS NR++ +IKALKEHVDT+S  S   +W +  D  E++ +  + S+E L+LLQKSML
Sbjct: 61   NFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120

Query: 1392 EKQWNISFDQAGTLDAPGGVN-KKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQWN+SF++  + D+    N KKI +T SG SARQRR N+RRK  NQ+  +   S  K 
Sbjct: 121  EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKF 180

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             RS+ISP+LLQ RL GYVKG+ S ++L H EV+ LS+ I+AG+S E+HKS+L+ERLGCEP
Sbjct: 181  LRSVISPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEP 240

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            SDEQ+  SLR+SRA+L +K+I+CSLARE+LAM+NVRLVMSIAQKYDNMGAE+ADLVQGGL
Sbjct: 241  SDEQIADSLRISRADLQAKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGL 300

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALVDNSRTLRLP+HLHERL LIRNAKIR
Sbjct: 301  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIR 360

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKG+TPSID+IAESL MSQ+KVRNATEAISKVFSLDREAFP+LNGLPGET HSYIADN
Sbjct: 361  LEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
              ENNPWHG DEW+LK+EVNKLI +TL ERE++IIRLY+GLD+E  TWEDIS++ GLSRE
Sbjct: 421  RPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSRE 480

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            RVRQVGLVALEKLKHAAR+R  EAMLVKH
Sbjct: 481  RVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>OAY44539.1 hypothetical protein MANES_08G159000 [Manihot esculenta]
          Length = 508

 Score =  714 bits (1842), Expect = 0.0
 Identities = 363/507 (71%), Positives = 437/507 (86%), Gaps = 2/507 (0%)
 Frame = -3

Query: 1746 MATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGPG 1567
            MATAAVIGLS+GKRLLSS+FY SDL +K F+V++ G+T +Q AS KN I AKKS+N+GP 
Sbjct: 1    MATAAVIGLSSGKRLLSSTFYYSDLTEKPFNVYDHGLTYYQIASTKNGIAAKKSSNYGPR 60

Query: 1566 VPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSMLE 1390
             PS NR+T++IKALKEHVD +S  ST  +W +  + +E+D +  + S+E L+LLQKS+LE
Sbjct: 61   FPSSNRNTRSIKALKEHVDAASASSTAVTWSKTFNDIEEDSSDLDYSVEALLLLQKSLLE 120

Query: 1389 KQWNISFDQAGTLDAPG-GVNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKHP 1213
            KQWN+SF++  + D+      KKI +T SG SAR+RR N+RRK ++Q+ S++  S  KH 
Sbjct: 121  KQWNLSFERTISSDSSSINSQKKIPVTCSGLSARKRRVNTRRKTLSQSKSIVQASTFKHL 180

Query: 1212 RSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEPS 1033
            +S +SPELLQ RL GYVKG+ S++LL+H EV+HLSK IKAG+S+EEHKS+L+ERLGCEPS
Sbjct: 181  KSAVSPELLQNRLKGYVKGVVSEELLTHKEVVHLSKIIKAGLSMEEHKSRLKERLGCEPS 240

Query: 1032 DEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGLI 853
            D+QL +SLR+SR EL SK+I CSLARE+LAM+NVRLVMSIAQ+YDNMGAE+ADLVQGGLI
Sbjct: 241  DKQLATSLRISRTELQSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 300

Query: 852  GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIRL 673
            GLLRGIEKFDSSKG+KISTYVYWWIRQGVSKALV+NSRTLRLP+HLHERL LIR AKIRL
Sbjct: 301  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPNHLHERLGLIRIAKIRL 360

Query: 672  EEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADNN 493
            E+KG+TPSID+IAESL +SQKKVRNATEAISKVFSLDREAFP+LNG PGET HSYIADN 
Sbjct: 361  EDKGVTPSIDRIAESLNISQKKVRNATEAISKVFSLDREAFPSLNGFPGETHHSYIADNC 420

Query: 492  LENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRER 313
            +ENNPWHG DEW+LKDEVNKLI +TL ERER+IIRLY+GL  E  TWEDIS++ GLSRER
Sbjct: 421  IENNPWHGVDEWALKDEVNKLIDSTLREREREIIRLYHGLGNECLTWEDISKRIGLSRER 480

Query: 312  VRQVGLVALEKLKHAARRRRLEAMLVK 232
            VRQVGLVALEKLKHAAR+++LEAMLVK
Sbjct: 481  VRQVGLVALEKLKHAARKKKLEAMLVK 507


>XP_012070278.1 PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
            XP_012070279.1 PREDICTED: RNA polymerase sigma factor
            sigA [Jatropha curcas] KDP39565.1 hypothetical protein
            JCGZ_02585 [Jatropha curcas]
          Length = 508

 Score =  711 bits (1836), Expect = 0.0
 Identities = 367/508 (72%), Positives = 438/508 (86%), Gaps = 2/508 (0%)
 Frame = -3

Query: 1746 MATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGPG 1567
            MATAAVIGL AGKRLLSS+FY SDL +KLF+V++ G+T +Q++S KNVI+AKKS+N+G  
Sbjct: 1    MATAAVIGLHAGKRLLSSTFYYSDLTEKLFNVNDHGLTHYQSSSTKNVIVAKKSSNYGSS 60

Query: 1566 VPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSMLE 1390
              S NR+ Q+IKALKEHVDT+S PST  +  +    +E+  +  + S+E L+LLQKSMLE
Sbjct: 61   FQSSNRNAQSIKALKEHVDTASSPSTAATGFETFVDIEEASSDLDYSVEALLLLQKSMLE 120

Query: 1389 KQWNISFDQAGTLDAPGGVNKK-IQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKHP 1213
            KQWN+SF++  + D+P   ++K I IT SG SARQRR N+RRK + Q+ S++  S  K  
Sbjct: 121  KQWNLSFERTASSDSPSTKSQKQIPITCSGLSARQRRINTRRKNLIQSKSIVQASGFKQL 180

Query: 1212 RSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEPS 1033
            +S +SPELL  RL GYVKGI S++LL+HAEV+ LS+ IKAG+SLEEHKS+L++RLGC+PS
Sbjct: 181  KSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKSRLKDRLGCDPS 240

Query: 1032 DEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGLI 853
            DEQL +SLR+S A+L SK+I CSLARE+LAM+NVRLVMSIAQ+YDNMGAE+ADLVQGGLI
Sbjct: 241  DEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI 300

Query: 852  GLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIRL 673
            GLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERL LIRNAKIRL
Sbjct: 301  GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRL 360

Query: 672  EEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADNN 493
            EEKG+TPSID+IAESL MSQKKVRNATEAISKVFSLDREAFP+LNGLPGET HSYIADN 
Sbjct: 361  EEKGVTPSIDRIAESLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNC 420

Query: 492  LENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRER 313
             ENNPWHG DEW+LKDEVNKLI  TL +RER+IIRLYYGLD E+ TWEDIS++ GLSRER
Sbjct: 421  PENNPWHGVDEWALKDEVNKLIDLTLQQREREIIRLYYGLDNETLTWEDISKRIGLSRER 480

Query: 312  VRQVGLVALEKLKHAARRRRLEAMLVKH 229
            VRQVGLVALEKLKHAAR+++LEAMLVKH
Sbjct: 481  VRQVGLVALEKLKHAARKKKLEAMLVKH 508


>XP_007029766.2 PREDICTED: RNA polymerase sigma factor sigA isoform X1 [Theobroma
            cacao]
          Length = 508

 Score =  709 bits (1829), Expect = 0.0
 Identities = 363/509 (71%), Positives = 439/509 (86%), Gaps = 2/509 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGL+ GKRLLSSSF  SD+ +KL   ++ G +  Q +S K++I+AKKS+N   
Sbjct: 1    MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQ 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
             +PS NR  Q+IKALKEHVD++S+ ST E   Q ++ LE +    + S+E L+LLQKSML
Sbjct: 61   SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNHLEVESYDLDYSVEALLLLQKSML 120

Query: 1392 EKQWNISFDQAGTLDAPGG-VNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQW +SF++    ++P   ++KKI +T SG SARQRR N++RK ++Q  S++ P+  K 
Sbjct: 121  EKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILSQNKSIIQPNA-KQ 179

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             RS+ISPELLQ RL GYVKG+ S++LLSHAEV+ LSK IKAG+SLEEH+ +L+ERLGCEP
Sbjct: 180  LRSLISPELLQSRLKGYVKGVVSEELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEP 239

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            SDEQL +SL++SRAEL SK+IECSLARE+LAM+NVRLVMSIAQ+YDNMGAE++DL+QGGL
Sbjct: 240  SDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERL LIRNAKIR
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIR 359

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKGITP+ID+IAESL MSQKKVRNATEA+SKVFSLDR+AFP+LNGLPGET HSYIADN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
            ++EN PWHG DEW+LKDEVN+LI+ TLGERER+IIRLYYGLDKES TWEDIS++ GLSRE
Sbjct: 420  HVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRE 479

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            RVRQVGLVALEKLKHAAR++++EAMLVKH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>KDO48032.1 hypothetical protein CISIN_1g010521mg [Citrus sinensis] KDO48033.1
            hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 508

 Score =  709 bits (1829), Expect = 0.0
 Identities = 358/509 (70%), Positives = 431/509 (84%), Gaps = 2/509 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGLSAGKRLLSSSFY SD+++K   +++LG    Q  S KNV+ AKKS+N+ P
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
              PS NR TQ IKALKEHVDT+   ST E W +  + +E++ +  + S+E L+LLQKSML
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFA-STAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 119

Query: 1392 EKQWNISFDQAGTLDAPGG-VNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQWN+SF++    D+P    +KK+ +T SG SARQRR NS++K ++Q  S++  +  K 
Sbjct: 120  EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQNGSKQ 179

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             RS+ISPEL+Q RL GYVKG+ S++LL+HAEV+ LSK IK G+SL++HK +L+ERLGCEP
Sbjct: 180  LRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            S EQL +SLR+SR EL S ++ECSLARE+L M+NVRLVMSIAQ+YDNMGA++ADLVQGGL
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 299

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERL LIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKG+TPS+D+IAE L MSQKKVRNATEAI KVFSLDREAFP+LNGLPGET HSYIADN
Sbjct: 360  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
             +ENNPWHG D+W+LKDEVNKLI  TLGERER+IIRLYYGLDKE  TWEDIS++ GLSRE
Sbjct: 420  RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 479

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            RVRQVGLVALEKLKHAAR++++EAMLVKH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>OAY70832.1 RNA polymerase sigma factor sigA [Ananas comosus]
          Length = 501

 Score =  706 bits (1823), Expect = 0.0
 Identities = 360/506 (71%), Positives = 425/506 (83%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGLSAG RLLS+SFY SDL++KLF V + G  QF +A++K+ IIA+KS NFGP
Sbjct: 1    MMATAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSAIIAQKSPNFGP 60

Query: 1569 GVPSNRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSMLE 1390
               SNR  + IKALKEH   S+  ST E+W    ++   D    E+SLEVL+LLQKSMLE
Sbjct: 61   NASSNRQMRAIKALKEHAH-SAATSTTENWLNTPEISPDDDPDLENSLEVLVLLQKSMLE 119

Query: 1389 KQWNISFDQAGTLDAPGGVNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKHPR 1210
            KQW + FDQ  T   P   N K+++T SG SARQRRT++RR+      S+M  +R K  R
Sbjct: 120  KQWELPFDQMKTFTEPAEKNNKVEVTRSGVSARQRRTDTRRRF-----SIMPLNRGKQIR 174

Query: 1209 SIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEPSD 1030
            S +SPELLQ R  GYVKG+ S+DLL+HAEV++LSK IK G+ LEEH++KL+E+LG EPSD
Sbjct: 175  STVSPELLQARNRGYVKGMVSEDLLTHAEVVNLSKKIKDGLYLEEHRAKLKEKLGTEPSD 234

Query: 1029 EQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGLIG 850
            +QL  SLRMSRAELHS++ ECS ARE+LAM+N+RLV+SIAQKYDN+GAE+ADL+QGGLIG
Sbjct: 235  KQLACSLRMSRAELHSRLFECSQAREKLAMSNIRLVISIAQKYDNLGAEMADLIQGGLIG 294

Query: 849  LLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIRLE 670
            LLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERLSLIRNAKIRLE
Sbjct: 295  LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLE 354

Query: 669  EKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADNNL 490
            +KGITPSIDK+AESL MSQKKVRNATEA++KV SLDREAFP+LNGLPGETLHSYIAD NL
Sbjct: 355  DKGITPSIDKLAESLNMSQKKVRNATEAVNKVLSLDREAFPSLNGLPGETLHSYIADRNL 414

Query: 489  ENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRERV 310
            ENNPWHGF+EWS+KDEVNKL+   L +RERDI++LY+GL  ES TWEDISRQFGLSRERV
Sbjct: 415  ENNPWHGFEEWSVKDEVNKLLHLALNKRERDIVQLYHGLGGESRTWEDISRQFGLSRERV 474

Query: 309  RQVGLVALEKLKHAARRRRLEAMLVK 232
            RQVGLVA+EKLKHAAR+RRL+AML K
Sbjct: 475  RQVGLVAMEKLKHAARKRRLDAMLAK 500


>EOY10268.1 Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score =  706 bits (1822), Expect = 0.0
 Identities = 363/509 (71%), Positives = 437/509 (85%), Gaps = 2/509 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGL+ GKRLLSSSF  SD+ +KL   ++ G +  Q +S K++I+AKKS+N   
Sbjct: 1    MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQ 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
             +PS NR  Q+IKALKEHVD++S+ ST E   Q ++ LE +    + S+E L+LLQKSML
Sbjct: 61   SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSML 120

Query: 1392 EKQWNISFDQAGTLDAPGG-VNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQW +SF++    ++P   ++KKI +T SG SARQRR N++RK + Q  S++ P+  K 
Sbjct: 121  EKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNA-KQ 179

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             RS+ISPELLQ RL GYVKG+ S +LLSHAEV+ LSK IKAG+SLEEH+ +L+ERLGCEP
Sbjct: 180  LRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEP 239

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            SDEQL +SL++SRAEL SK+IECSLARE+LAM+NVRLVMSIAQ+YDNMGAE++DL+QGGL
Sbjct: 240  SDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERL LIRNAKIR
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIR 359

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKGITP+ID+IAESL MSQKKVRNATEA+SKVFSLDR+AFP+LNGLPGET HSYIADN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
            ++EN PWHG DEW+LKDEVN+LI+ TLGERER+IIRLYYGLDKES TWEDIS++ GLSRE
Sbjct: 420  HVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRE 479

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            RVRQVGLVALEKLKHAAR++++EAMLVKH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>XP_020114871.1 RNA polymerase sigma factor sigA isoform X1 [Ananas comosus]
          Length = 501

 Score =  705 bits (1819), Expect = 0.0
 Identities = 359/506 (70%), Positives = 425/506 (83%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGLSAG RLLS+SFY SDL++KLF V + G  QF +A++K+ IIA+KS NFGP
Sbjct: 1    MMATAAVIGLSAGNRLLSTSFYPSDLSEKLFGVPDHGPMQFSSAASKSAIIAQKSPNFGP 60

Query: 1569 GVPSNRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSMLE 1390
               SNR  + IKALKEH   S+  ST E+W    ++   D    E+SLEVL+LLQKSMLE
Sbjct: 61   NASSNRQMRAIKALKEHAH-SAATSTTENWLNTPEISPDDDPDLENSLEVLVLLQKSMLE 119

Query: 1389 KQWNISFDQAGTLDAPGGVNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKHPR 1210
            KQW + FDQ  T   P   N K+++T SG SARQRRT++RR+      S+M  +R K  R
Sbjct: 120  KQWELPFDQMKTFTEPAEKNNKVEVTRSGVSARQRRTDTRRRF-----SIMPLNRGKQIR 174

Query: 1209 SIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEPSD 1030
            S +SPELLQ R  GYVKG+ S+DLL+HAEV++LSK IK G+ L+EH++KL+E+LG EPSD
Sbjct: 175  STVSPELLQARNRGYVKGMVSEDLLTHAEVVNLSKKIKDGLYLKEHRAKLKEKLGTEPSD 234

Query: 1029 EQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGLIG 850
            +QL  SLRMSRAELHS++ ECS ARE+LAM+N+RLV+SIAQKYDN+GAE+ADL+QGGLIG
Sbjct: 235  KQLACSLRMSRAELHSRLFECSQAREKLAMSNIRLVISIAQKYDNLGAEMADLIQGGLIG 294

Query: 849  LLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIRLE 670
            LLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERLSLIRNAKIRLE
Sbjct: 295  LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLE 354

Query: 669  EKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADNNL 490
            +KGITPSIDK+AESL MSQKKVRNATEA++KV SLDREAFP+LNGLPGETLHSYIAD NL
Sbjct: 355  DKGITPSIDKLAESLNMSQKKVRNATEAVNKVLSLDREAFPSLNGLPGETLHSYIADRNL 414

Query: 489  ENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRERV 310
            ENNPWHGF+EWS+KDEVNKL+   L +RERDI++LY+GL  ES TWEDISRQFGLSRERV
Sbjct: 415  ENNPWHGFEEWSVKDEVNKLLHLALNKRERDIVQLYHGLGGESRTWEDISRQFGLSRERV 474

Query: 309  RQVGLVALEKLKHAARRRRLEAMLVK 232
            RQVGLVA+EKLKHAAR+RRL+AML K
Sbjct: 475  RQVGLVAMEKLKHAARKRRLDAMLAK 500


>XP_006484698.1 PREDICTED: RNA polymerase sigma factor sigA [Citrus sinensis]
            XP_006484699.1 PREDICTED: RNA polymerase sigma factor
            sigA [Citrus sinensis] XP_006484700.1 PREDICTED: RNA
            polymerase sigma factor sigA [Citrus sinensis]
          Length = 508

 Score =  705 bits (1819), Expect = 0.0
 Identities = 357/509 (70%), Positives = 429/509 (84%), Gaps = 2/509 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGLSAGKRLLSSSFY SD+++K   +++LG    Q  S KNV+ AKKS+N+ P
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
              PS NR TQ IKALKEHVDT+   ST E W +  + +E++ +  + S+E L+LLQKSML
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFA-STAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 119

Query: 1392 EKQWNISFDQAGTLDAPGG-VNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQWN+SF++    D+P    +KK+ +T SG SARQRR NS++K ++Q  S+   +  K 
Sbjct: 120  EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQNGSKQ 179

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             RS+ISPEL+Q  L GYVKG+ S++LL+HAEV+ LSK IK G+SL++HK +L+ERLGCEP
Sbjct: 180  LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            S EQL +SLR+SR EL S ++ECSLARE+L M+NVRLVMSIAQ+YDNMGA++ADLVQGGL
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 299

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERL LIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKG+TPS+D+IAE L MSQKKVRNATEAI KVFSLDREAFP+LNGLPGET HSYIADN
Sbjct: 360  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
             +ENNPWHG D+W+LKDEVNKLI  TLGERER+IIRLYYGLDKE  TWEDIS++ GLSRE
Sbjct: 420  RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 479

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            RVRQVGLVALEKLKHAAR++++EAMLVKH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>XP_006437403.1 hypothetical protein CICLE_v10031289mg [Citrus clementina] ESR50643.1
            hypothetical protein CICLE_v10031289mg [Citrus
            clementina]
          Length = 508

 Score =  705 bits (1819), Expect = 0.0
 Identities = 355/509 (69%), Positives = 430/509 (84%), Gaps = 2/509 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGLSAGKRLLSSSFY SD+++K   +++LG    Q  S KNV+ AKKS+N+ P
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
              PS NR TQ IKALKEHVDT+   ST E W +  + +E++ +  + S+E L+LLQKSML
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFA-STAEPWAEPPNSIEEESSELDYSVEALLLLQKSML 119

Query: 1392 EKQWNISFDQAGTLDAPGG-VNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQWN+SF++    D+P    +KK+ +T SG SARQRR NS++K ++Q  S++  +  K 
Sbjct: 120  EKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQ 179

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             RS+ISPEL+Q  L GYVKG+ S++LL+HAEV+ LSK IK G+SL++HK +L+ERLGCEP
Sbjct: 180  LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            S EQL +SLR+SR EL S ++ECSLARE+L M+NVRLVMSIAQ+YDNMGA++ADL+QGGL
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGL 299

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKG+KISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERL LIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKG+TP++D+IAE L MSQKKVRNATEAI KVFSLDREAFP+LNGLPGET HSYIADN
Sbjct: 360  LEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
             +ENNPWHG D+W+LKDEVNKLI  TLGERER+IIRLYYGLDKE  TWEDIS++ GLSRE
Sbjct: 420  RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 479

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            RVRQVGLVALEKLKHAAR++++EAMLVKH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>XP_008808794.1 PREDICTED: RNA polymerase sigma factor sigA [Phoenix dactylifera]
            XP_008808795.1 PREDICTED: RNA polymerase sigma factor
            sigA [Phoenix dactylifera] XP_008808796.1 PREDICTED: RNA
            polymerase sigma factor sigA [Phoenix dactylifera]
            XP_008808797.1 PREDICTED: RNA polymerase sigma factor
            sigA [Phoenix dactylifera]
          Length = 508

 Score =  704 bits (1817), Expect = 0.0
 Identities = 365/509 (71%), Positives = 427/509 (83%), Gaps = 4/509 (0%)
 Frame = -3

Query: 1746 MATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGPG 1567
            MATAAVIGLS GKRLLS+SFY +DL +KLF+V + G  QF  +S KN I AK+S+NFG  
Sbjct: 1    MATAAVIGLSTGKRLLSTSFYPADLAEKLFAVPDHGSMQFSTSSTKNTIAAKRSSNFGTN 60

Query: 1566 VPSNRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSMLEK 1387
            +PSNRH+Q IKALKEHVDT+++ ST ++W +  D LE   +  E SLEVLILLQKSMLEK
Sbjct: 61   IPSNRHSQAIKALKEHVDTAAL-STADAWFRRPDPLEDGESDLEYSLEVLILLQKSMLEK 119

Query: 1386 QWNISFDQAGTLDAPGGVNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLP----SRRK 1219
            QW + F+Q  T+D P    KK ++  SG SAR+RRT +RR+  N++ + M P       K
Sbjct: 120  QWKLPFEQIKTVDDPRESCKKTEVIRSGISARKRRTVTRRRCFNRS-AYMEPFNGGEEGK 178

Query: 1218 HPRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCE 1039
              RS +SPELLQ R+ GYV+G  S++LL+HAEV+HLS+ I+AG+SLEE + KL+E+LG E
Sbjct: 179  ELRSTVSPELLQTRVRGYVRGTVSENLLTHAEVVHLSRKIRAGLSLEEKRMKLKEKLGFE 238

Query: 1038 PSDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGG 859
            PSD+QL S LRMS AELHSK+ ECSLARE+LAM+NVRLVMSIAQKYDN+GAE+ADL+QGG
Sbjct: 239  PSDKQLASFLRMSHAELHSKLTECSLAREKLAMSNVRLVMSIAQKYDNLGAEMADLIQGG 298

Query: 858  LIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKI 679
            LIGLLRGIEKFDSSKG KISTYVYWWIRQGVS+ALV+NSRTLRLPSHLHERLSLIRNAKI
Sbjct: 299  LIGLLRGIEKFDSSKGCKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKI 358

Query: 678  RLEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIAD 499
            RLE+KG+ PSID IAESL MS KKV+NATEA+SKVFSLDREAFP+LNGLPGETLHSYIAD
Sbjct: 359  RLEDKGVMPSIDNIAESLNMSPKKVKNATEAVSKVFSLDREAFPSLNGLPGETLHSYIAD 418

Query: 498  NNLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSR 319
             NL N PWHGF++WSLKDEVNKL+  TL +RER IIRLYYG+  E+HTWEDISRQFGLSR
Sbjct: 419  KNLANIPWHGFEDWSLKDEVNKLLHATLSKRERAIIRLYYGIGNETHTWEDISRQFGLSR 478

Query: 318  ERVRQVGLVALEKLKHAARRRRLEAMLVK 232
            ERVRQVGLVALEKLKHAARRRRLEA+LVK
Sbjct: 479  ERVRQVGLVALEKLKHAARRRRLEALLVK 507


>OMO87271.1 RNA polymerase sigma-70 [Corchorus capsularis]
          Length = 508

 Score =  702 bits (1811), Expect = 0.0
 Identities = 358/508 (70%), Positives = 434/508 (85%), Gaps = 2/508 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMAT AVIGLS GKRLLSSSF  SD+ +KL   ++ G +    +S K++I+AKKS+N   
Sbjct: 1    MMATTAVIGLSTGKRLLSSSFSYSDIIEKLSYANDYGCSHHPTSSTKSLIVAKKSSNCSQ 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
             +PS NR TQ+IKALKEHVD+++V ST E W Q ++ L+++    + S++ L+LLQKSML
Sbjct: 61   NLPSSNRRTQSIKALKEHVDSATVISTAEPWFQGSNDLDEENYDLDYSVDALLLLQKSML 120

Query: 1392 EKQWNISFDQAGTLDAPGG-VNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQW +SF++    ++PG   +KKI +T SG SARQRR N++RK + Q  S++ PS  K 
Sbjct: 121  EKQWTLSFERTVFTESPGRKTHKKIPVTCSGVSARQRRLNTKRKLLRQNKSVIQPSA-KQ 179

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             RS+ISPEL Q RL GYVKG+ S++LLSHAEV+ LSK IK G+SLE+H+S+L ERLGCEP
Sbjct: 180  LRSLISPELFQSRLNGYVKGVVSEELLSHAEVVRLSKKIKVGLSLEDHRSRLTERLGCEP 239

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            SDEQL +SL+++RAEL SK+IECSLARE+LAM+NVRLVMSIAQ+YDNMGAE++DL+QGGL
Sbjct: 240  SDEQLATSLKITRAELRSKVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALV+NSRTLRLP+HLHERL LIRNAK R
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKNR 359

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKGITP+ID+IAESL MSQKKVRNATEA+SKVFSLDR+AFP+LNGLPGET HSYI DN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIPDN 419

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
            ++ENNPWHG DEW+LKDEVN+LI+ TLGERER+IIRLYYGLDK S TWEDIS++ GLSRE
Sbjct: 420  HVENNPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKGSLTWEDISKRIGLSRE 479

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVK 232
            RVRQVGLVALEKLKHAAR++++EAMLVK
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVK 507


>XP_012492333.1 PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
            [Gossypium raimondii] KJB44350.1 hypothetical protein
            B456_007G247500 [Gossypium raimondii]
          Length = 508

 Score =  701 bits (1810), Expect = 0.0
 Identities = 358/509 (70%), Positives = 433/509 (85%), Gaps = 2/509 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGLS GKRLLSSSF  S+  DKL    + G + +Q  S K +++AK+S+N   
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLMVAKRSSNCSQ 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
             +PS NRHTQ+IKA KEHVDT+S  ST E W   T+ LE++    + S+E L+LLQKSML
Sbjct: 61   NLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSML 120

Query: 1392 EKQWNISFDQAGTLDAPGG-VNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQW +SF++    ++P    + K+ +T SG SARQRR +++RK ++Q  S++ P+  K 
Sbjct: 121  EKQWTLSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFSTKRKILSQNKSMIQPNA-KQ 179

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             RS+I PELLQ RL GYVKG+ S+DLLSHAEV+ LS+ IKAG+SLEEH+ +L+ERLGCEP
Sbjct: 180  LRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSRKIKAGLSLEEHRLRLKERLGCEP 239

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            SDEQL +SL++SRAEL S+ IECSLARE+LAM+NVRLVMSIAQ+YDNMGAE++DL+QGGL
Sbjct: 240  SDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALV+NSRTLRLP++LHERL LIRNAK R
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYR 359

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKGITP+ID+IAESL MSQKKVRNATEA+SKVFSLDR+AFP+LNGLPGET HSYIADN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
            ++ENNPWHG DEW+LKDEVN+LI+ TLGERER+IIRLY+GLDKES TWEDIS++ GLSRE
Sbjct: 420  HVENNPWHGVDEWALKDEVNRLINITLGEREREIIRLYHGLDKESLTWEDISKRIGLSRE 479

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            RVRQVGLVALEKLKHAAR++++EAMLVKH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>XP_016671610.1 PREDICTED: RNA polymerase sigma factor sigA-like [Gossypium hirsutum]
            XP_016671617.1 PREDICTED: RNA polymerase sigma factor
            sigA-like [Gossypium hirsutum]
          Length = 508

 Score =  700 bits (1807), Expect = 0.0
 Identities = 359/509 (70%), Positives = 430/509 (84%), Gaps = 2/509 (0%)
 Frame = -3

Query: 1749 MMATAAVIGLSAGKRLLSSSFYSSDLNDKLFSVHELGVTQFQAASAKNVIIAKKSNNFGP 1570
            MMATAAVIGLS GKRLLSSSF  S+  DKL    + G + +Q  S K +I+AK+S+N   
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLIVAKRSSNCSQ 60

Query: 1569 GVPS-NRHTQTIKALKEHVDTSSVPSTDESWQQWTDLLEKDGNHNESSLEVLILLQKSML 1393
             +PS NRHTQ+IKA K HVDT+S  ST E W    + LE++    + S+E L+LLQKSML
Sbjct: 61   NLPSSNRHTQSIKAFKGHVDTASSISTVEPWIHGANDLEQESYDLDCSVEALLLLQKSML 120

Query: 1392 EKQWNISFDQAGTLDAPGG-VNKKIQITGSGTSARQRRTNSRRKAINQTGSLMLPSRRKH 1216
            EKQW +SF++   +++P    + K+ +T SG SARQRR N++RK ++Q  S++ P+  K 
Sbjct: 121  EKQWTLSFERTMFIESPSRKTHSKVPVTCSGVSARQRRFNTKRKILSQNKSMIQPNA-KQ 179

Query: 1215 PRSIISPELLQGRLTGYVKGISSKDLLSHAEVIHLSKTIKAGISLEEHKSKLQERLGCEP 1036
             RS+I PELLQ RL GYVKG+ S+DLLSHAEV+ LSK IKAG+SLEEH  +L+ERLGCEP
Sbjct: 180  LRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKERLGCEP 239

Query: 1035 SDEQLVSSLRMSRAELHSKMIECSLARERLAMNNVRLVMSIAQKYDNMGAELADLVQGGL 856
            SDEQL +SL++SRAEL S+ IECSLARE+LAM+NVRLVMSIAQ+YDNMGAE++DL+QGGL
Sbjct: 240  SDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGL 299

Query: 855  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSKALVDNSRTLRLPSHLHERLSLIRNAKIR 676
            IGLLRGIEKFDSSKGYKISTYVYWWIRQGVS+ALV+NSRTLRLP++LHERL LIRNAK R
Sbjct: 300  IGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKYR 359

Query: 675  LEEKGITPSIDKIAESLKMSQKKVRNATEAISKVFSLDREAFPTLNGLPGETLHSYIADN 496
            LEEKGITP+ID+IAESL MSQKKVRNATEA+SKVFSLDR+AFP+LNGLPGET HSYIADN
Sbjct: 360  LEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419

Query: 495  NLENNPWHGFDEWSLKDEVNKLISTTLGERERDIIRLYYGLDKESHTWEDISRQFGLSRE 316
            ++ENNPWHG DEW+LKDEVN+LI  TLGERER+IIRLY+GLDKES TWEDIS++ GLSRE
Sbjct: 420  HVENNPWHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISKRIGLSRE 479

Query: 315  RVRQVGLVALEKLKHAARRRRLEAMLVKH 229
            RVRQVGLVALEKLKHAAR++++EAMLVKH
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508