BLASTX nr result

ID: Lithospermum22_contig00041980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00041980
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus comm...    69   8e-10
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2...    66   8e-09
ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisom...    63   5e-08
ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis...    63   5e-08
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...    63   5e-08

>ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus communis]
            gi|223543074|gb|EEF44609.1| DNA topoisomerase II,
            putative [Ricinus communis]
          Length = 1212

 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = -2

Query: 177  KLISEALKAAENTGISPEKKVRKMRASPFNKKSGSVLGR 61
            KL++E LK AEN GISPEKKVRKMRASPFNKKSGSVLGR
Sbjct: 1094 KLLTEMLKPAENPGISPEKKVRKMRASPFNKKSGSVLGR 1132


>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
            predicted protein [Populus trichocarpa]
          Length = 1482

 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 32/39 (82%), Positives = 35/39 (89%)
 Frame = -2

Query: 177  KLISEALKAAENTGISPEKKVRKMRASPFNKKSGSVLGR 61
            KL++E LK AE  GISPEKKVRK+RASPFNKKSGSVLGR
Sbjct: 1377 KLLTEMLKPAEGAGISPEKKVRKVRASPFNKKSGSVLGR 1415


>ref|XP_004165384.1| PREDICTED: LOW QUALITY PROTEIN: DNA topoisomerase 2-like [Cucumis
            sativus]
          Length = 1460

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 32/41 (78%), Positives = 39/41 (95%), Gaps = 1/41 (2%)
 Frame = -2

Query: 177  KLISEALK-AAENTGISPEKKVRKMRASPFNKKSGSVLGRS 58
            KLI++ L+ AAEN+GISPEKKVRK+RASPFNKKSGS+LGR+
Sbjct: 1349 KLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRT 1389


>ref|XP_004149716.1| PREDICTED: DNA topoisomerase 2-like [Cucumis sativus]
          Length = 1459

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 32/41 (78%), Positives = 39/41 (95%), Gaps = 1/41 (2%)
 Frame = -2

Query: 177  KLISEALK-AAENTGISPEKKVRKMRASPFNKKSGSVLGRS 58
            KLI++ L+ AAEN+GISPEKKVRK+RASPFNKKSGS+LGR+
Sbjct: 1348 KLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRT 1388


>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
            predicted protein [Populus trichocarpa]
          Length = 1468

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 30/38 (78%), Positives = 35/38 (92%)
 Frame = -2

Query: 177  KLISEALKAAENTGISPEKKVRKMRASPFNKKSGSVLG 64
            +L++E LK AE +GISPEKKVRKMRASPFNKKSGS+LG
Sbjct: 1367 QLLTEMLKPAEESGISPEKKVRKMRASPFNKKSGSLLG 1404


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