BLASTX nr result

ID: Lithospermum22_contig00024994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024994
         (2467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20053.3| unnamed protein product [Vitis vinifera]              617   e-174
ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containi...   617   e-174
ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containi...   617   e-174
ref|XP_002519129.1| pentatricopeptide repeat-containing protein,...   597   e-168
ref|XP_002330266.1| predicted protein [Populus trichocarpa] gi|2...   590   e-166

>emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  617 bits (1591), Expect = e-174
 Identities = 297/550 (54%), Positives = 405/550 (73%)
 Frame = +1

Query: 235  MIEKLRSKPEHIIPLIEKMSNETLDTHCYCLAITILSRLPDHKQATXXXXXXXXXXXADT 414
            ++  L SKP+ +   I  +    LDT  YCLA+ +L+RLP  K A            A  
Sbjct: 79   VLYNLCSKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATN 138

Query: 415  EAIFQGLLLARDRLNVMSWAVFDLLILAYCRLKRPQDALASFYLSTHNNILPNTQTCNAM 594
              +F  L L+RDRL+V S  VFDLL+   C L+R  +A   FY+     I+P  +TCN M
Sbjct: 139  RELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDM 198

Query: 595  LSLFLRFNNTRLPWLLYTHMFRLGIKSTLVTFNIMINVLCKQGKLNKAMDFILHMEALSF 774
            LSLFL+ N   + W+LY  MFRL I ST+ TFNIM+NVLCK+GKL KA +FI  ME L F
Sbjct: 199  LSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGF 258

Query: 775  NPTVVTYSTLLNGYCCKGDIDGAYRILALMKGKGLDPDTYTYGSLINGLCKKRRLVEASK 954
             P VV+Y+T+++GY  +G+I+GA RIL  M+ KG++PD+YTYGSLI+G+CK+ RL EAS 
Sbjct: 259  KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 318

Query: 955  LLREMLDSGFTPSAVHYNSLIDGYCNMGELTTAFSFKDEMIIKGIMPTVSTYNTLIQSMF 1134
            L  +M++ G  P+AV YN+LIDGYCN G+L  AFS++DEM+ KGIMP+VSTYN L+ ++F
Sbjct: 319  LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALF 378

Query: 1135 LEARYQDVKNLTKEMEVKGIQRDVITYNILIHGYSRADNARLAFKLHDEMLRKGIEPTRI 1314
            +E R  +  ++ KEM  KGI  D ITYNILI+GYSR  NA+ AF LH+EML KGIEPT +
Sbjct: 379  MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 438

Query: 1315 TYTSLIYILGKKHKMEKADALFSEVMGKGISPDLVMFNSLIDGHCASGNIVKALSLLEQM 1494
            TYTSLIY+L ++++M++AD LF +++ +G+SPD++MFN+++DGHCA+GN+ +A  LL++M
Sbjct: 439  TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 498

Query: 1495 ERMNILPDEITYNTLIQGYCREGKVEDAYLLLNEMKDKGIRPDHISYGTLLCWYSKRGNM 1674
            +R ++ PDE+T+NTL+QG CREGKVE+A +LL+EMK +GI+PDHISY TL+  Y +RG++
Sbjct: 499  DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 558

Query: 1675 KEAFDVRDEMLRLGFELNLLTYNALIYGLCKIGEGAHAEKLLKEMVERGITPDDSTYISL 1854
            K+AF VRDEML +GF   LLTYNALI  LCK  EG  AE+LLKEMV +GI+PDDSTY+SL
Sbjct: 559  KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 618

Query: 1855 IKAVGHPEAI 1884
            I+ +G+ + +
Sbjct: 619  IEGMGNVDTL 628



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 17/254 (6%)
 Frame = +1

Query: 235  MIEKLRSKPEHIIPLIEKMSNETLDTHCYCLAITILSRLPDHKQATXXXXXXXXXXXADT 414
            MI+++R K   IIP          D   Y + I   SR  + K+A              T
Sbjct: 389  MIKEMRKKG--IIP----------DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 436

Query: 415  EAIFQGLLLARDRLNVMSWA-----------------VFDLLILAYCRLKRPQDALASFY 543
               +  L+    R N M  A                 +F+ ++  +C     + A     
Sbjct: 437  HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 496

Query: 544  LSTHNNILPNTQTCNAMLSLFLRFNNTRLPWLLYTHMFRLGIKSTLVTFNIMINVLCKQG 723
                 ++ P+  T N ++    R        +L   M R GIK   +++N +I+   ++G
Sbjct: 497  EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 556

Query: 724  KLNKAMDFILHMEALSFNPTVVTYSTLLNGYCCKGDIDGAYRILALMKGKGLDPDTYTYG 903
             +  A      M ++ FNPT++TY+ L+   C   + D A  +L  M  KG+ PD  TY 
Sbjct: 557  DIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYL 616

Query: 904  SLINGLCKKRRLVE 945
            SLI G+     LVE
Sbjct: 617  SLIEGMGNVDTLVE 630


>ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
            mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  617 bits (1591), Expect = e-174
 Identities = 297/550 (54%), Positives = 405/550 (73%)
 Frame = +1

Query: 235  MIEKLRSKPEHIIPLIEKMSNETLDTHCYCLAITILSRLPDHKQATXXXXXXXXXXXADT 414
            ++  L SKP+ +   I  +    LDT  YCLA+ +L+RLP  K A            A  
Sbjct: 101  VLYNLCSKPQLVSDFIHHLHPHCLDTKSYCLAVVLLARLPSPKLALQLLKQVMGTRIATN 160

Query: 415  EAIFQGLLLARDRLNVMSWAVFDLLILAYCRLKRPQDALASFYLSTHNNILPNTQTCNAM 594
              +F  L L+RDRL+V S  VFDLL+   C L+R  +A   FY+     I+P  +TCN M
Sbjct: 161  RELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDM 220

Query: 595  LSLFLRFNNTRLPWLLYTHMFRLGIKSTLVTFNIMINVLCKQGKLNKAMDFILHMEALSF 774
            LSLFL+ N   + W+LY  MFRL I ST+ TFNIM+NVLCK+GKL KA +FI  ME L F
Sbjct: 221  LSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGF 280

Query: 775  NPTVVTYSTLLNGYCCKGDIDGAYRILALMKGKGLDPDTYTYGSLINGLCKKRRLVEASK 954
             P VV+Y+T+++GY  +G+I+GA RIL  M+ KG++PD+YTYGSLI+G+CK+ RL EAS 
Sbjct: 281  KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 340

Query: 955  LLREMLDSGFTPSAVHYNSLIDGYCNMGELTTAFSFKDEMIIKGIMPTVSTYNTLIQSMF 1134
            L  +M++ G  P+AV YN+LIDGYCN G+L  AFS++DEM+ KGIMP+VSTYN L+ ++F
Sbjct: 341  LFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALF 400

Query: 1135 LEARYQDVKNLTKEMEVKGIQRDVITYNILIHGYSRADNARLAFKLHDEMLRKGIEPTRI 1314
            +E R  +  ++ KEM  KGI  D ITYNILI+GYSR  NA+ AF LH+EML KGIEPT +
Sbjct: 401  MEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHV 460

Query: 1315 TYTSLIYILGKKHKMEKADALFSEVMGKGISPDLVMFNSLIDGHCASGNIVKALSLLEQM 1494
            TYTSLIY+L ++++M++AD LF +++ +G+SPD++MFN+++DGHCA+GN+ +A  LL++M
Sbjct: 461  TYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM 520

Query: 1495 ERMNILPDEITYNTLIQGYCREGKVEDAYLLLNEMKDKGIRPDHISYGTLLCWYSKRGNM 1674
            +R ++ PDE+T+NTL+QG CREGKVE+A +LL+EMK +GI+PDHISY TL+  Y +RG++
Sbjct: 521  DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 580

Query: 1675 KEAFDVRDEMLRLGFELNLLTYNALIYGLCKIGEGAHAEKLLKEMVERGITPDDSTYISL 1854
            K+AF VRDEML +GF   LLTYNALI  LCK  EG  AE+LLKEMV +GI+PDDSTY+SL
Sbjct: 581  KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 640

Query: 1855 IKAVGHPEAI 1884
            I+ +G+ + +
Sbjct: 641  IEGMGNVDTL 650



 Score = 65.9 bits (159), Expect = 5e-08
 Identities = 63/254 (24%), Positives = 101/254 (39%), Gaps = 17/254 (6%)
 Frame = +1

Query: 235  MIEKLRSKPEHIIPLIEKMSNETLDTHCYCLAITILSRLPDHKQATXXXXXXXXXXXADT 414
            MI+++R K   IIP          D   Y + I   SR  + K+A              T
Sbjct: 411  MIKEMRKKG--IIP----------DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPT 458

Query: 415  EAIFQGLLLARDRLNVMSWA-----------------VFDLLILAYCRLKRPQDALASFY 543
               +  L+    R N M  A                 +F+ ++  +C     + A     
Sbjct: 459  HVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLK 518

Query: 544  LSTHNNILPNTQTCNAMLSLFLRFNNTRLPWLLYTHMFRLGIKSTLVTFNIMINVLCKQG 723
                 ++ P+  T N ++    R        +L   M R GIK   +++N +I+   ++G
Sbjct: 519  EMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRG 578

Query: 724  KLNKAMDFILHMEALSFNPTVVTYSTLLNGYCCKGDIDGAYRILALMKGKGLDPDTYTYG 903
             +  A      M ++ FNPT++TY+ L+   C   + D A  +L  M  KG+ PD  TY 
Sbjct: 579  DIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYL 638

Query: 904  SLINGLCKKRRLVE 945
            SLI G+     LVE
Sbjct: 639  SLIEGMGNVDTLVE 652


>ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
            mitochondrial-like [Glycine max]
          Length = 623

 Score =  617 bits (1590), Expect = e-174
 Identities = 302/555 (54%), Positives = 402/555 (72%), Gaps = 4/555 (0%)
 Frame = +1

Query: 214  HINPS--HTMIEKLRSKPEHIIPLIEKMSNE--TLDTHCYCLAITILSRLPDHKQATXXX 381
            H+ PS   + +  LR  P+ ++ L+  + N   +LD     LAI +L RLP  K +    
Sbjct: 57   HLTPSLLSSTLTTLRHNPQLVLHLLSHLQNHPHSLDLATSSLAICVLYRLPSPKPSINLI 116

Query: 382  XXXXXXXXADTEAIFQGLLLARDRLNVMSWAVFDLLILAYCRLKRPQDALASFYLSTHNN 561
                         IF  L LARDR++  +  +FDLL+ AYC LK+P +AL  FYL     
Sbjct: 117  QRLILSPTCTNRTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKG 176

Query: 562  ILPNTQTCNAMLSLFLRFNNTRLPWLLYTHMFRLGIKSTLVTFNIMINVLCKQGKLNKAM 741
             +PN +TCN MLSLFL+ N T++ W+LY  MFR+ I+S+L TFNIMINVLCK+GKL KA 
Sbjct: 177  FVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAK 236

Query: 742  DFILHMEALSFNPTVVTYSTLLNGYCCKGDIDGAYRILALMKGKGLDPDTYTYGSLINGL 921
            +FI HME L   P VVTY+T+++G+C +G    A  I   MK KGL+PD YTY S I+GL
Sbjct: 237  EFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGL 296

Query: 922  CKKRRLVEASKLLREMLDSGFTPSAVHYNSLIDGYCNMGELTTAFSFKDEMIIKGIMPTV 1101
            CK+ RL EAS L+ +ML+ G  P+AV YN+LIDGYCN G+L  A++++DEMI KGIM ++
Sbjct: 297  CKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASL 356

Query: 1102 STYNTLIQSMFLEARYQDVKNLTKEMEVKGIQRDVITYNILIHGYSRADNARLAFKLHDE 1281
             TYN  I ++F+E R  D  N+ KEM  KG+  D +T+NILI+GY R  +A+ AF L DE
Sbjct: 357  VTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDE 416

Query: 1282 MLRKGIEPTRITYTSLIYILGKKHKMEKADALFSEVMGKGISPDLVMFNSLIDGHCASGN 1461
            M+ KGI+PT +TYTSLIY+LGK+++M++ADALFS++  +G+ PD+++FN+LIDGHCA+GN
Sbjct: 417  MVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGN 476

Query: 1462 IVKALSLLEQMERMNILPDEITYNTLIQGYCREGKVEDAYLLLNEMKDKGIRPDHISYGT 1641
            I +A  LL++M+ M +LPDEITYNTL+QGYCREGKVE+A  LL+EMK +GI+PDHISY T
Sbjct: 477  IDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNT 536

Query: 1642 LLCWYSKRGNMKEAFDVRDEMLRLGFELNLLTYNALIYGLCKIGEGAHAEKLLKEMVERG 1821
            L+  YSKRG+MK+AF VRDEM+  GF+  +LTYNALI GLCK  EG HAE+LLKEMV +G
Sbjct: 537  LISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG 596

Query: 1822 ITPDDSTYISLIKAV 1866
            ITPDDSTY+S+I+A+
Sbjct: 597  ITPDDSTYLSIIEAM 611



 Score =  154 bits (388), Expect = 1e-34
 Identities = 97/322 (30%), Positives = 164/322 (50%), Gaps = 1/322 (0%)
 Frame = +1

Query: 907  LINGLCKKRRLVEASKLLREMLDSGFTPSAVHYNSLIDGYCNMGELTTAFSFKDEMIIKG 1086
            +++  C  R + +   L R+ +D+  T   + ++ L+  YC + +   A      +  KG
Sbjct: 120  ILSPTCTNRTIFDELALARDRVDAKTT---LIFDLLVRAYCELKKPNEALECFYLIKEKG 176

Query: 1087 IMPTVSTYNTLIQSMFLEA-RYQDVKNLTKEMEVKGIQRDVITYNILIHGYSRADNARLA 1263
             +P + T N ++ S+FL+  R Q    L  EM    I+  + T+NI+I+   +    + A
Sbjct: 177  FVPNIETCNQML-SLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKA 235

Query: 1264 FKLHDEMLRKGIEPTRITYTSLIYILGKKHKMEKADALFSEVMGKGISPDLVMFNSLIDG 1443
             +    M   G++P  +TY ++I+    + K ++A  +F  +  KG+ PD   +NS I G
Sbjct: 236  KEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISG 295

Query: 1444 HCASGNIVKALSLLEQMERMNILPDEITYNTLIQGYCREGKVEDAYLLLNEMKDKGIRPD 1623
             C  G + +A  L+ +M    ++P+ +TYN LI GYC +G ++ AY   +EM  KGI   
Sbjct: 296  LCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMAS 355

Query: 1624 HISYGTLLCWYSKRGNMKEAFDVRDEMLRLGFELNLLTYNALIYGLCKIGEGAHAEKLLK 1803
             ++Y   +      G M +A ++  EM   G   + +T+N LI G C+ G+   A  LL 
Sbjct: 356  LVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLD 415

Query: 1804 EMVERGITPDDSTYISLIKAVG 1869
            EMV +GI P   TY SLI  +G
Sbjct: 416  EMVGKGIQPTLVTYTSLIYVLG 437



 Score =  144 bits (362), Expect = 1e-31
 Identities = 97/333 (29%), Positives = 146/333 (43%), Gaps = 35/333 (10%)
 Frame = +1

Query: 478  FDLLILAYCRLKRPQDALASFYLSTHNNILPNTQTCNAMLSLFLRFNNTRLPWLLYTHMF 657
            ++  I   C+  R ++A           ++PN  T NA++  +    +    +     M 
Sbjct: 289  YNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMI 348

Query: 658  RLGIKSTLVTFNIMINVLCKQGKLNKAMDFILHMEALSFNPTVVTYSTLLNGYCCKGDID 837
              GI ++LVT+N+ I+ L  +G++  A + I  M      P  VT++ L+NGYC  GD  
Sbjct: 349  SKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAK 408

Query: 838  GAYRILALMKGKGLDPDTYTYGSLINGLCKKRRLVEAS---------------------- 951
             A+ +L  M GKG+ P   TY SLI  L K+ R+ EA                       
Sbjct: 409  RAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALI 468

Query: 952  -------------KLLREMLDSGFTPSAVHYNSLIDGYCNMGELTTAFSFKDEMIIKGIM 1092
                         +LL+EM +    P  + YN+L+ GYC  G++  A    DEM  +GI 
Sbjct: 469  DGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIK 528

Query: 1093 PTVSTYNTLIQSMFLEARYQDVKNLTKEMEVKGIQRDVITYNILIHGYSRADNARLAFKL 1272
            P   +YNTLI         +D   +  EM   G    ++TYN LI G  +      A +L
Sbjct: 529  PDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEEL 588

Query: 1273 HDEMLRKGIEPTRITYTSLIYILGKKHKMEKAD 1371
              EM+ KGI P   TY S+I  +     +E  D
Sbjct: 589  LKEMVSKGITPDDSTYLSIIEAMETVDDLEGND 621



 Score =  142 bits (359), Expect = 3e-31
 Identities = 82/262 (31%), Positives = 134/262 (51%)
 Frame = +1

Query: 466  SWAVFDLLILAYCRLKRPQDALASFYLSTHNNILPNTQTCNAMLSLFLRFNNTRLPWLLY 645
            S   ++L I A     R  DA           ++P+  T N +++ + R  + +  + L 
Sbjct: 355  SLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLL 414

Query: 646  THMFRLGIKSTLVTFNIMINVLCKQGKLNKAMDFILHMEALSFNPTVVTYSTLLNGYCCK 825
              M   GI+ TLVT+  +I VL K+ ++ +A      ++     P ++ ++ L++G+C  
Sbjct: 415  DEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCAN 474

Query: 826  GDIDGAYRILALMKGKGLDPDTYTYGSLINGLCKKRRLVEASKLLREMLDSGFTPSAVHY 1005
            G+ID A+++L  M    + PD  TY +L+ G C++ ++ EA +LL EM   G  P  + Y
Sbjct: 475  GNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISY 534

Query: 1006 NSLIDGYCNMGELTTAFSFKDEMIIKGIMPTVSTYNTLIQSMFLEARYQDVKNLTKEMEV 1185
            N+LI GY   G++  AF  +DEM+  G  PT+ TYN LIQ +      +  + L KEM  
Sbjct: 535  NTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVS 594

Query: 1186 KGIQRDVITYNILIHGYSRADN 1251
            KGI  D  TY  +I      D+
Sbjct: 595  KGITPDDSTYLSIIEAMETVDD 616


>ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223541792|gb|EEF43340.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 643

 Score =  597 bits (1538), Expect = e-168
 Identities = 295/559 (52%), Positives = 391/559 (69%), Gaps = 6/559 (1%)
 Frame = +1

Query: 211  KHINPS------HTMIEKLRSKPEHIIPLIEKMSNETLDTHCYCLAITILSRLPDHKQAT 372
            KH+ P+         +  L  K +  +  +  +  + LD    CLA+ ++SR P  K   
Sbjct: 74   KHLAPNLSPSLISATLLSLHKKSDLALQFVTHIGFKGLDIKTKCLAVAVVSRSPSPKSTL 133

Query: 373  XXXXXXXXXXXADTEAIFQGLLLARDRLNVMSWAVFDLLILAYCRLKRPQDALASFYLST 552
                       A  + +F  L + RDRL   S  VFD+LI A C LKR  DA   F +  
Sbjct: 134  HLLKQTIESRVAGVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMK 193

Query: 553  HNNILPNTQTCNAMLSLFLRFNNTRLPWLLYTHMFRLGIKSTLVTFNIMINVLCKQGKLN 732
               ++P  +T NAMLSLFL+ N T   W+LY  MFRL IKST+ TFNIMINVLCK+GKL 
Sbjct: 194  EKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLK 253

Query: 733  KAMDFILHMEALSFNPTVVTYSTLLNGYCCKGDIDGAYRILALMKGKGLDPDTYTYGSLI 912
            KA DFI  ME L   P VVTY+T+++GYC +G ++GA  +L +MK +G++PD+YTYGSLI
Sbjct: 254  KAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLI 313

Query: 913  NGLCKKRRLVEASKLLREMLDSGFTPSAVHYNSLIDGYCNMGELTTAFSFKDEMIIKGIM 1092
            +G+CK  +L EAS +L +M + G  P+AV YN+LIDGYCN G+L  AF ++DEM+ + I+
Sbjct: 314  SGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAIL 373

Query: 1093 PTVSTYNTLIQSMFLEARYQDVKNLTKEMEVKGIQRDVITYNILIHGYSRADNARLAFKL 1272
            PTVSTYN LI ++FLE +  +   + K+M   GI  D ITYNILI+GY R  NA+ AF L
Sbjct: 374  PTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNL 433

Query: 1273 HDEMLRKGIEPTRITYTSLIYILGKKHKMEKADALFSEVMGKGISPDLVMFNSLIDGHCA 1452
            HDEM+ KGI+PT +TYTSLIY+L K+++M+ AD LF +++ +G SPDL+MFN+LIDGHCA
Sbjct: 434  HDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCA 493

Query: 1453 SGNIVKALSLLEQMERMNILPDEITYNTLIQGYCREGKVEDAYLLLNEMKDKGIRPDHIS 1632
            +GN+ +A +LL++M++ NI+PDE+TYNTL+QG CREGKVE+A  LL EMK +GIRPDHIS
Sbjct: 494  NGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHIS 553

Query: 1633 YGTLLCWYSKRGNMKEAFDVRDEMLRLGFELNLLTYNALIYGLCKIGEGAHAEKLLKEMV 1812
            Y TL+  YSKRG++ +AF +RDEML +GF   LLTYNALI GLCK  +G  AE+LLKEMV
Sbjct: 554  YNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMV 613

Query: 1813 ERGITPDDSTYISLIKAVG 1869
             +GITPDDSTY SLI+ +G
Sbjct: 614  SKGITPDDSTYFSLIEGIG 632


>ref|XP_002330266.1| predicted protein [Populus trichocarpa] gi|222871301|gb|EEF08432.1|
            predicted protein [Populus trichocarpa]
          Length = 590

 Score =  590 bits (1521), Expect = e-166
 Identities = 287/556 (51%), Positives = 392/556 (70%), Gaps = 2/556 (0%)
 Frame = +1

Query: 217  INPS--HTMIEKLRSKPEHIIPLIEKMSNETLDTHCYCLAITILSRLPDHKQATXXXXXX 390
            I PS   T +  L   P+     +  +    LD    CLA+ ++S  P+ K +       
Sbjct: 35   ITPSLISTALTSLHKTPDLAFQFVTHIGFGDLDIKSKCLAMAVISHAPNSKPSLQLLKET 94

Query: 391  XXXXXADTEAIFQGLLLARDRLNVMSWAVFDLLILAYCRLKRPQDALASFYLSTHNNILP 570
                      +F  L +AR  L + ++ ++DLLI A C LKR  DA   F +     ++P
Sbjct: 95   INSGVYSIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIP 154

Query: 571  NTQTCNAMLSLFLRFNNTRLPWLLYTHMFRLGIKSTLVTFNIMINVLCKQGKLNKAMDFI 750
            +   CN MLSLFL+ N T   W+LY  MFR+ IKS++VTFNIMINVLCK+GKL KA +FI
Sbjct: 155  HVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFI 214

Query: 751  LHMEALSFNPTVVTYSTLLNGYCCKGDIDGAYRILALMKGKGLDPDTYTYGSLINGLCKK 930
              MEAL   P VVTY+T+++GYC +G ++GA  I  LMK +G+ PD+YTYGS I+G+CK+
Sbjct: 215  GLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKE 274

Query: 931  RRLVEASKLLREMLDSGFTPSAVHYNSLIDGYCNMGELTTAFSFKDEMIIKGIMPTVSTY 1110
             +L EAS +L +M + G  P+AV YN+LIDGYCN G L  AF ++D+M+ +G+MPTVSTY
Sbjct: 275  GKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTY 334

Query: 1111 NTLIQSMFLEARYQDVKNLTKEMEVKGIQRDVITYNILIHGYSRADNARLAFKLHDEMLR 1290
            N LI ++FL+ +  +   + KEM  KG+  D +TYNILI+GY R  N + AF LHDEM+ 
Sbjct: 335  NMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMIS 394

Query: 1291 KGIEPTRITYTSLIYILGKKHKMEKADALFSEVMGKGISPDLVMFNSLIDGHCASGNIVK 1470
            KGI+PTR+TYTSLIY+L K+ +M++AD LF +++ KGI PDL+MFN+LIDGHCA+GN+ +
Sbjct: 395  KGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDR 454

Query: 1471 ALSLLEQMERMNILPDEITYNTLIQGYCREGKVEDAYLLLNEMKDKGIRPDHISYGTLLC 1650
            A ++L++M++M ++PDE+T+NTL+QG CREGKVE A  L+ EMK +GI+PDHISY TL+ 
Sbjct: 455  AFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLIS 514

Query: 1651 WYSKRGNMKEAFDVRDEMLRLGFELNLLTYNALIYGLCKIGEGAHAEKLLKEMVERGITP 1830
             YSKRG+MK+AF VRDEML +GF   LLTYNALI GLCK  EG HAE+LLKEM+ +GITP
Sbjct: 515  GYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITP 574

Query: 1831 DDSTYISLIKAVGHPE 1878
            +D+TY+SLI+ +G+ E
Sbjct: 575  NDNTYLSLIEGIGNVE 590


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