BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024898
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                100   8e-27
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...    96   8e-26
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...    96   1e-23
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    92   3e-23
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    91   4e-23

>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 99.8 bits (247), Expect(3) = 8e-27
 Identities = 53/146 (36%), Positives = 78/146 (53%)
 Frame = +1

Query: 136 QNFGSMLGLKSNLDKSTCYYAGTTDEQITKIGKIMKMSTGSLLVCYLAISVNTSQIITRD 315
           + F    GL  +L+KST Y AG ++     I      ++G L V YL + + T Q+ T D
Sbjct: 299 KEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMTTAD 358

Query: 316 CSSLEDKICGMIDGWGNKKLSYAGRLILINYVMLGVSNYWAQSMFVPVEVVKSIENHVRQ 495
            S L DK+   I  W  + LSYAGRL LIN V++ +SN+W  +  +P   +K IE     
Sbjct: 359 YSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSA 418

Query: 496 FLWSGSKDGKTYSKVAWSQIGKKKMK 573
           FLWSG +     +K+ W+ + K K +
Sbjct: 419 FLWSGPELNPKKAKITWTSLCKLKQE 444



 Score = 41.2 bits (95), Expect(3) = 8e-27
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +2

Query: 20  RGFDYHPDCKEVKLTNVCFADDLFLVLGATERA 118
           R   YHP CK++ LT++CFADDL + +   +R+
Sbjct: 258 RNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRS 290



 Score = 25.8 bits (55), Expect(3) = 8e-27
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 626 IWNLCGTKETIWVK*IHTYKLRGQSF 703
           IW L   + ++WV  + TY +R  SF
Sbjct: 464 IWRLVSRQSSLWVNWVWTYIIRKGSF 489


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score = 96.3 bits (238), Expect(3) = 8e-26
 Identities = 52/146 (35%), Positives = 77/146 (52%)
 Frame = +1

Query: 136  QNFGSMLGLKSNLDKSTCYYAGTTDEQITKIGKIMKMSTGSLLVCYLAISVNTSQIITRD 315
            ++F    GL  +L+KST Y A  ++     I      ++G L V YL   + T Q+ T D
Sbjct: 868  KDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMTTAD 927

Query: 316  CSSLEDKICGMIDGWGNKKLSYAGRLILINYVMLGVSNYWAQSMFVPVEVVKSIENHVRQ 495
             S L DK+   I  W  + LSYAGRL LIN V++ +SN+W  +  +P   +K IE     
Sbjct: 928  YSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAYRLPAGCIKEIEKLCSA 987

Query: 496  FLWSGSKDGKTYSKVAWSQIGKKKMK 573
            FLWSG +     +K+ W+ + K K +
Sbjct: 988  FLWSGPELNPKKAKITWTSLCKLKQE 1013



 Score = 41.2 bits (95), Expect(3) = 8e-26
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +2

Query: 20  RGFDYHPDCKEVKLTNVCFADDLFLVLGATERA 118
           R   YHP CK++ LT++CFADDL + +   +R+
Sbjct: 827 RNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRS 859



 Score = 25.8 bits (55), Expect(3) = 8e-26
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 626  IWNLCGTKETIWVK*IHTYKLRGQSF 703
            IW L   + ++WV  + TY +R  SF
Sbjct: 1033 IWRLVSRQSSLWVNWVWTYIIRKGSF 1058


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score = 95.5 bits (236), Expect(3) = 1e-23
 Identities = 46/143 (32%), Positives = 79/143 (55%)
 Frame = +1

Query: 139  NFGSMLGLKSNLDKSTCYYAGTTDEQITKIGKIMKMSTGSLLVCYLAISVNTSQIITRDC 318
            +F    GL+++++KS  Y+ G   E+  ++   ++M  GSL   YL + + + ++    C
Sbjct: 715  SFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYLGVPLASKKLNFSQC 774

Query: 319  SSLEDKICGMIDGWGNKKLSYAGRLILINYVMLGVSNYWAQSMFVPVEVVKSIENHVRQF 498
              L DKI     GW    LSYAGRL L+  ++  + NYW Q   +P +++K++E   R+F
Sbjct: 775  KPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIFPLPKKLIKAVETTCRKF 834

Query: 499  LWSGSKDGKTYSKVAWSQIGKKK 567
            LW+G+ D    + VAW  + + K
Sbjct: 835  LWTGTVDTSYKAPVAWDFLQQPK 857



 Score = 35.8 bits (81), Expect(3) = 1e-23
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = +2

Query: 26  FDYHPDCKEVKLTNVCFADDLFLVLGATERAFNVI 130
           F++HP C+ +KLT++ FADDL +   A   + + I
Sbjct: 675 FNFHPKCERIKLTHLMFADDLLMFARADASSISKI 709



 Score = 24.6 bits (52), Expect(3) = 1e-23
 Identities = 7/34 (20%), Positives = 19/34 (55%)
 Frame = +2

Query: 599 WNMGCMCFHIWNLCGTKETIWVK*IHTYKLRGQS 700
           WN   +   +W +   ++ +WV+ ++ Y ++ Q+
Sbjct: 870 WNKAAILKLLWAITFKQDKLWVRWVNAYYIKRQN 903


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 91.7 bits (226), Expect(3) = 3e-23
 Identities = 49/144 (34%), Positives = 75/144 (52%)
 Frame = +1

Query: 136  QNFGSMLGLKSNLDKSTCYYAGTTDEQITKIGKIMKMSTGSLLVCYLAISVNTSQIITRD 315
            + F    GL+ +L+KST Y AG +     +       + G L V YL + + T Q+ T D
Sbjct: 1023 KEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMTTAD 1082

Query: 316  CSSLEDKICGMIDGWGNKKLSYAGRLILINYVMLGVSNYWAQSMFVPVEVVKSIENHVRQ 495
             S L + +   I  W  + LSYAGRL L+N V++ ++N+W  +  +P   ++ IE     
Sbjct: 1083 YSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAYRLPAGCIREIEKLCSA 1142

Query: 496  FLWSGSKDGKTYSKVAWSQIGKKK 567
            FLWSG       +K+AWS I + K
Sbjct: 1143 FLWSGPVLNPKKAKIAWSSICQPK 1166



 Score = 37.7 bits (86), Expect(3) = 3e-23
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
 Frame = +2

Query: 20   RGFDYHPDCKEVKLTNVCFADDLFLVLG----ATERAFNVIK 133
            R   YHP C+++ LT++CFADDL + +     + E   NV K
Sbjct: 982  RNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFK 1023



 Score = 25.0 bits (53), Expect(3) = 3e-23
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 626  IWNLCGTKETIWVK*IHTYKLRGQSF 703
            IW L  T+ ++WV  I T+ +R  +F
Sbjct: 1188 IWRLLSTQPSLWVTWIWTFIIRKGTF 1213


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 91.3 bits (225), Expect(3) = 4e-23
 Identities = 50/142 (35%), Positives = 75/142 (52%)
 Frame = +1

Query: 142 FGSMLGLKSNLDKSTCYYAGTTDEQITKIGKIMKMSTGSLLVCYLAISVNTSQIITRDCS 321
           F + LGLK  ++K+T Y AG +D     +        G L V YL + + T ++ T D S
Sbjct: 449 FAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYS 508

Query: 322 SLEDKICGMIDGWGNKKLSYAGRLILINYVMLGVSNYWAQSMFVPVEVVKSIENHVRQFL 501
            L D+I   I  W ++ LS+AGRL LIN V+  ++N+W  +  +P E +  I       L
Sbjct: 509 PLIDQIRRRIGMWTSRYLSFAGRLSLINSVLWSITNFWMNAFRLPRECINEINRISSALL 568

Query: 502 WSGSKDGKTYSKVAWSQIGKKK 567
           WSG +     +KV+W +I K K
Sbjct: 569 WSGPELNPKKAKVSWDEICKPK 590



 Score = 39.3 bits (90), Expect(3) = 4e-23
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +2

Query: 20  RGFDYHPDCKEVKLTNVCFADDLFLVLGATERAFNVI 130
           R F YHP CK + LT++CFADDL ++     R+ + I
Sbjct: 406 REFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGI 442



 Score = 23.5 bits (49), Expect(3) = 4e-23
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 626 IWNLCGTKETIWVK*IHTYKLRGQSF 703
           IW L   ++++WVK      L+ +SF
Sbjct: 612 IWRLLSCQDSLWVKWTRMNLLKKESF 637