BLASTX nr result

ID: Lithospermum22_contig00024778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024778
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298818.1| predicted protein [Populus trichocarpa] gi|2...   197   9e-49
ref|XP_002531193.1| conserved hypothetical protein [Ricinus comm...   194   1e-47
ref|XP_002885364.1| extracellular ligand-gated ion channel [Arab...   192   4e-47
dbj|BAB02810.1| unnamed protein product [Arabidopsis thaliana]        191   8e-47
dbj|BAD95208.1| hypothetical protein [Arabidopsis thaliana]           191   8e-47

>ref|XP_002298818.1| predicted protein [Populus trichocarpa] gi|222846076|gb|EEE83623.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score =  197 bits (501), Expect = 9e-49
 Identities = 99/135 (73%), Positives = 114/135 (84%), Gaps = 5/135 (3%)
 Frame = +2

Query: 35  RSATRITHKAQAVTCLAAKWHVCATIDSFDSAETETPVTHITSDQYFP----EGSSDAD- 199
           RSAT+ITHKAQAVT LAAKWH+CAT+D+FD+ E ETP     S Q FP    +G SD D 
Sbjct: 301 RSATKITHKAQAVTSLAAKWHICATLDTFDATEGETP--RHDSGQVFPVVGTDGESDGDD 358

Query: 200 VGDEEDELDNSKFLPAYAYSTISFQKRQALVQYFENNRAGVTLYGFMLDRGSLHTIFGIE 379
            GDEEDELDNSK +PAYAYSTISFQKRQALV YFENNRAG+T+YGF+LDR +LH+IFG+E
Sbjct: 359 AGDEEDELDNSKLIPAYAYSTISFQKRQALVTYFENNRAGITVYGFILDRSTLHSIFGVE 418

Query: 380 LSLVLWLLGKTVGIS 424
           L+LVLWLLGKT+GIS
Sbjct: 419 LALVLWLLGKTIGIS 433


>ref|XP_002531193.1| conserved hypothetical protein [Ricinus communis]
           gi|223529195|gb|EEF31170.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 391

 Score =  194 bits (492), Expect = 1e-47
 Identities = 99/134 (73%), Positives = 112/134 (83%), Gaps = 4/134 (2%)
 Frame = +2

Query: 35  RSATRITHKAQAVTCLAAKWHVCATIDSFDSAETETPVTH----ITSDQYFPEGSSDADV 202
           RSAT+ITHKAQ+VT LAAKWH+CAT+D+FDS E ETP T     IT D+   EG    D 
Sbjct: 264 RSATKITHKAQSVTSLAAKWHICATLDTFDSTEGETPRTPTANGITDDE---EGD---DA 317

Query: 203 GDEEDELDNSKFLPAYAYSTISFQKRQALVQYFENNRAGVTLYGFMLDRGSLHTIFGIEL 382
           GDEEDELDNSK +PAYAYSTISFQKRQALV YFENNRAG+T+YGF LDR +LH+IFG+EL
Sbjct: 318 GDEEDELDNSKLIPAYAYSTISFQKRQALVNYFENNRAGITVYGFTLDRSTLHSIFGVEL 377

Query: 383 SLVLWLLGKTVGIS 424
           +LVLWLLGKTVGIS
Sbjct: 378 ALVLWLLGKTVGIS 391


>ref|XP_002885364.1| extracellular ligand-gated ion channel [Arabidopsis lyrata subsp.
           lyrata] gi|297331204|gb|EFH61623.1| extracellular
           ligand-gated ion channel [Arabidopsis lyrata subsp.
           lyrata]
          Length = 451

 Score =  192 bits (487), Expect = 4e-47
 Identities = 95/137 (69%), Positives = 113/137 (82%), Gaps = 7/137 (5%)
 Frame = +2

Query: 35  RSATRITHKAQAVTCLAAKWHVCATIDSFDSAETETP--VTHITSDQYFP----EGSSDA 196
           RSA++ITHKAQAVTCLAAKWHVCATI+SF++ + ETP  V   +   Y+P     G SD+
Sbjct: 315 RSASKITHKAQAVTCLAAKWHVCATIESFETVDGETPRLVDRASGHGYYPTDDDNGESDS 374

Query: 197 -DVGDEEDELDNSKFLPAYAYSTISFQKRQALVQYFENNRAGVTLYGFMLDRGSLHTIFG 373
            D GDEED+ DN+  +PAYAYSTISFQKRQALV YFENNRAG+T++GF LDR +LHTIFG
Sbjct: 375 EDYGDEEDDFDNNNLIPAYAYSTISFQKRQALVNYFENNRAGITVFGFTLDRSTLHTIFG 434

Query: 374 IELSLVLWLLGKTVGIS 424
           IE+SLVLWLLGKT+GIS
Sbjct: 435 IEMSLVLWLLGKTIGIS 451


>dbj|BAB02810.1| unnamed protein product [Arabidopsis thaliana]
          Length = 430

 Score =  191 bits (484), Expect = 8e-47
 Identities = 94/137 (68%), Positives = 113/137 (82%), Gaps = 7/137 (5%)
 Frame = +2

Query: 35  RSATRITHKAQAVTCLAAKWHVCATIDSFDSAETETP--VTHITSDQYFP----EGSSDA 196
           RSA++ITHKAQAVTCLAAKWHVCATI+SF++ + ETP  V   +   Y+P     G SD+
Sbjct: 294 RSASKITHKAQAVTCLAAKWHVCATIESFETVDGETPRLVDRASGHGYYPTDDDNGESDS 353

Query: 197 -DVGDEEDELDNSKFLPAYAYSTISFQKRQALVQYFENNRAGVTLYGFMLDRGSLHTIFG 373
            D GDEED+ DN+  +PAYAYSTISFQKRQALV YFENNR+G+T++GF LDR +LHTIFG
Sbjct: 354 EDYGDEEDDFDNNNLIPAYAYSTISFQKRQALVNYFENNRSGITVFGFTLDRSTLHTIFG 413

Query: 374 IELSLVLWLLGKTVGIS 424
           IE+SLVLWLLGKT+GIS
Sbjct: 414 IEMSLVLWLLGKTIGIS 430


>dbj|BAD95208.1| hypothetical protein [Arabidopsis thaliana]
          Length = 148

 Score =  191 bits (484), Expect = 8e-47
 Identities = 94/137 (68%), Positives = 113/137 (82%), Gaps = 7/137 (5%)
 Frame = +2

Query: 35  RSATRITHKAQAVTCLAAKWHVCATIDSFDSAETETP--VTHITSDQYFP----EGSSDA 196
           RSA++ITHKAQAVTCLAAKWHVCATI+SF++ + ETP  V   +   Y+P     G SD+
Sbjct: 12  RSASKITHKAQAVTCLAAKWHVCATIESFETVDGETPRLVDRASGHGYYPTDDDNGESDS 71

Query: 197 -DVGDEEDELDNSKFLPAYAYSTISFQKRQALVQYFENNRAGVTLYGFMLDRGSLHTIFG 373
            D GDEED+ DN+  +PAYAYSTISFQKRQALV YFENNR+G+T++GF LDR +LHTIFG
Sbjct: 72  EDYGDEEDDFDNNNLIPAYAYSTISFQKRQALVNYFENNRSGITVFGFTLDRSTLHTIFG 131

Query: 374 IELSLVLWLLGKTVGIS 424
           IE+SLVLWLLGKT+GIS
Sbjct: 132 IEMSLVLWLLGKTIGIS 148


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