BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00024561
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi...   149   3e-34
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,...   142   4e-32
ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arab...   135   3e-30
ref|NP_191302.2| pentatricopeptide repeat-containing protein [Ar...   134   6e-30
gb|AAP40452.1| unknown protein [Arabidopsis thaliana]                 134   6e-30

>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  149 bits (375), Expect = 3e-34
 Identities = 76/119 (63%), Positives = 86/119 (72%)
 Frame = +1

Query: 43  ASLVETLRTQVRSNSFHEAISTYINLTSLGIHPDNFVFPAILKASSALHDLKFGQQIHCN 222
           AS V+ LR++ RSN F EAISTYI +T  G  PDNF FPA+LKA S L DLK G+QIH  
Sbjct: 58  ASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAA 117

Query: 223 IVKLGYDRNSTPVANTLVHMYGKCGCEIDHVYKVFDGITQRDQVSWNSLINALCKLEEW 399
            VK GY  +S  VANTLV+MYGKCG  I  V KVFD IT RDQVSWNS I ALC+ E+W
Sbjct: 118 AVKFGYGSSSVTVANTLVNMYGKCG-GIGDVCKVFDRITDRDQVSWNSFIAALCRFEKW 175


>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 679

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/119 (54%), Positives = 88/119 (73%)
 Frame = +1

Query: 43  ASLVETLRTQVRSNSFHEAISTYINLTSLGIHPDNFVFPAILKASSALHDLKFGQQIHCN 222
           AS +E+LR   RSN F EAISTY+++   G+ PD++ FP +LKA + L DL  G+QIH +
Sbjct: 43  ASWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAH 102

Query: 223 IVKLGYDRNSTPVANTLVHMYGKCGCEIDHVYKVFDGITQRDQVSWNSLINALCKLEEW 399
           +VK GY+ +S  +AN+LV+ YGKC  E+D VYKVFD I +RD VSWNSLI+A C+ +EW
Sbjct: 103 VVKYGYESSSVAIANSLVNFYGKCS-ELDDVYKVFDRINERDLVSWNSLISAFCRAQEW 160


>ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata] gi|297323990|gb|EFH54411.1| hypothetical protein
           ARALYDRAFT_486188 [Arabidopsis lyrata subsp. lyrata]
          Length = 886

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/116 (55%), Positives = 87/116 (75%)
 Frame = +1

Query: 52  VETLRTQVRSNSFHEAISTYINLTSLGIHPDNFVFPAILKASSALHDLKFGQQIHCNIVK 231
           ++ LR++VRSN   EA+ TYI++  LGI PDNF FPA+LKA + L D+  G+QIH ++ K
Sbjct: 62  IDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYK 121

Query: 232 LGYDRNSTPVANTLVHMYGKCGCEIDHVYKVFDGITQRDQVSWNSLINALCKLEEW 399
            GY  +S  VANTLV++Y KCG +   VYKVFD I++R+QVSWNSLI++LC  E+W
Sbjct: 122 FGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCSFEKW 176


>ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
           gi|332646133|gb|AEE79654.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/116 (53%), Positives = 88/116 (75%)
 Frame = +1

Query: 52  VETLRTQVRSNSFHEAISTYINLTSLGIHPDNFVFPAILKASSALHDLKFGQQIHCNIVK 231
           ++ LR++VRSN   EA+ TY+++  LGI PDN+ FPA+LKA + L D++ G+QIH ++ K
Sbjct: 66  IDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYK 125

Query: 232 LGYDRNSTPVANTLVHMYGKCGCEIDHVYKVFDGITQRDQVSWNSLINALCKLEEW 399
            GY  +S  VANTLV++Y KCG +   VYKVFD I++R+QVSWNSLI++LC  E+W
Sbjct: 126 FGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCSFEKW 180


>gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  134 bits (338), Expect = 6e-30
 Identities = 62/116 (53%), Positives = 88/116 (75%)
 Frame = +1

Query: 52  VETLRTQVRSNSFHEAISTYINLTSLGIHPDNFVFPAILKASSALHDLKFGQQIHCNIVK 231
           ++ LR++VRSN   EA+ TY+++  LGI PDN+ FPA+LKA + L D++ G+QIH ++ K
Sbjct: 66  IDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYK 125

Query: 232 LGYDRNSTPVANTLVHMYGKCGCEIDHVYKVFDGITQRDQVSWNSLINALCKLEEW 399
            GY  +S  VANTLV++Y KCG +   VYKVFD I++R+QVSWNSLI++LC  E+W
Sbjct: 126 FGYGVDSVTVANTLVNLYRKCG-DFGAVYKVFDRISERNQVSWNSLISSLCSFEKW 180