BLASTX nr result

ID: Lithospermum22_contig00002544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002544
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [R...   114   6e-24
ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [R...   113   1e-23
gb|ABR17957.1| unknown [Picea sitchensis]                             108   6e-22
ref|XP_002279082.1| PREDICTED: 60S acidic ribosomal protein P1-1...   104   9e-21
ref|XP_001772615.1| predicted protein [Physcomitrella patens sub...   103   1e-20

>ref|XP_002515071.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223545551|gb|EEF47055.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 113

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/62 (90%), Positives = 59/62 (95%)
 Frame = -1

Query: 280 MSVGELACTYASLVLHDDGIPITAEKIATLVKAANVSIESYWPSLFAKLAEKRNIEDLIM 101
           MSVGELAC+YA +VLHDDGIPITAEKIA LVKAANV IESYWPSLFAKLAEKRNIEDL+M
Sbjct: 1   MSVGELACSYAVMVLHDDGIPITAEKIAQLVKAANVQIESYWPSLFAKLAEKRNIEDLVM 60

Query: 100 NV 95
           NV
Sbjct: 61  NV 62


>ref|XP_002524416.1| 60S acidic ribosomal protein P1, putative [Ricinus communis]
           gi|223536300|gb|EEF37951.1| 60S acidic ribosomal protein
           P1, putative [Ricinus communis]
          Length = 110

 Score =  113 bits (283), Expect = 1e-23
 Identities = 51/62 (82%), Positives = 61/62 (98%)
 Frame = -1

Query: 280 MSVGELACTYASLVLHDDGIPITAEKIATLVKAANVSIESYWPSLFAKLAEKRNIEDLIM 101
           M+ GELACTYA+L+LHDDGIP+T+EKIATLVKAANV++ESYWPSLFAKLAEK+NI+DL+M
Sbjct: 1   MAAGELACTYATLILHDDGIPVTSEKIATLVKAANVAVESYWPSLFAKLAEKKNIDDLVM 60

Query: 100 NV 95
           NV
Sbjct: 61  NV 62


>gb|ABR17957.1| unknown [Picea sitchensis]
          Length = 113

 Score =  108 bits (269), Expect = 6e-22
 Identities = 53/62 (85%), Positives = 56/62 (90%)
 Frame = -1

Query: 280 MSVGELACTYASLVLHDDGIPITAEKIATLVKAANVSIESYWPSLFAKLAEKRNIEDLIM 101
           MSV E+ACTYA+LVLHDD IPITAEKI+TLVKAANV IESYWP LFAKL EKRNIEDLI 
Sbjct: 1   MSVSEVACTYAALVLHDDNIPITAEKISTLVKAANVQIESYWPGLFAKLMEKRNIEDLIS 60

Query: 100 NV 95
           NV
Sbjct: 61  NV 62


>ref|XP_002279082.1| PREDICTED: 60S acidic ribosomal protein P1-1 isoform 1 [Vitis
           vinifera] gi|297742458|emb|CBI34607.3| unnamed protein
           product [Vitis vinifera]
          Length = 111

 Score =  104 bits (259), Expect = 9e-21
 Identities = 47/62 (75%), Positives = 57/62 (91%)
 Frame = -1

Query: 280 MSVGELACTYASLVLHDDGIPITAEKIATLVKAANVSIESYWPSLFAKLAEKRNIEDLIM 101
           MS+GE ACT A L+LHDDGIP+TAEKI+TL+KAANVS+ESYWP LFAKL EK++++DLIM
Sbjct: 1   MSIGEQACTLAILILHDDGIPVTAEKISTLLKAANVSVESYWPGLFAKLVEKKSVDDLIM 60

Query: 100 NV 95
           NV
Sbjct: 61  NV 62


>ref|XP_001772615.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162676170|gb|EDQ62657.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 110

 Score =  103 bits (258), Expect = 1e-20
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -1

Query: 280 MSVGELACTYASLVLHDDGIPITAEKIATLVKAANVSIESYWPSLFAKLAEKRNIEDLIM 101
           MSV ELACTYA L+LHDDGI ITA+KIA+LVKAANVS+E YWPSLFAKL EKR+++DLI 
Sbjct: 1   MSVSELACTYACLILHDDGIAITADKIASLVKAANVSVEGYWPSLFAKLCEKRSVDDLIT 60

Query: 100 NV 95
           NV
Sbjct: 61  NV 62


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