BLASTX nr result

ID: Lithospermum22_contig00002531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lithospermum22_contig00002531
         (1213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532120.1| 50S ribosomal protein L13, putative [Ricinus...   335   1e-89
gb|ABK96526.1| unknown [Populus trichocarpa x Populus deltoides]      333   7e-89
emb|CBI20115.3| unnamed protein product [Vitis vinifera]              332   9e-89
ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloro...   332   9e-89
ref|XP_004146016.1| PREDICTED: 50S ribosomal protein L13, chloro...   332   1e-88

>ref|XP_002532120.1| 50S ribosomal protein L13, putative [Ricinus communis]
           gi|223528200|gb|EEF30260.1| 50S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 245

 Score =  335 bits (859), Expect = 1e-89
 Identities = 166/202 (82%), Positives = 175/202 (86%), Gaps = 3/202 (1%)
 Frame = -3

Query: 992 SVPTSSNLSLK---IIKNQSTSDDAATVVPVDQRWMFEGDELNGPDIWNKTWYPKAADHV 822
           SV TS + S      + ++ T       VPVDQRWMFE  ELNGPDIWNKTWYPKAADHV
Sbjct: 44  SVRTSFSASCSRSFTVLSEKTDKKVVPHVPVDQRWMFEEFELNGPDIWNKTWYPKAADHV 103

Query: 821 NTSKTWYVVDATDKILGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKIAVSGKKR 642
           NT K WYVVDATDKILGRLASTIAI+IRGKNLATYTPSVDMGAFVIVVNAEK+AVSGKKR
Sbjct: 104 NTEKPWYVVDATDKILGRLASTIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKR 163

Query: 641 TQKLYRRHSGRPGGMTVETFDQLQNRIPERILEHAVRGMLPKGRLGRELFNHLKVYTGPD 462
           TQKLYRRHSGRPGGM VETFDQLQ RIPERI+EHAVRGMLPKGRLGR LFNHLKVY GPD
Sbjct: 164 TQKLYRRHSGRPGGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPD 223

Query: 461 HPHEAQQPVELPIRDKRIQKQK 396
           HPHEAQ+P+ELPIRDKRIQ QK
Sbjct: 224 HPHEAQKPIELPIRDKRIQIQK 245


>gb|ABK96526.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 241

 Score =  333 bits (853), Expect = 7e-89
 Identities = 155/187 (82%), Positives = 170/187 (90%)
 Frame = -3

Query: 956 IKNQSTSDDAATVVPVDQRWMFEGDELNGPDIWNKTWYPKAADHVNTSKTWYVVDATDKI 777
           ++ +       T VP+DQRW+FE  E+NGPDIWN TWYPKAADH+NT KTWY+VDATDKI
Sbjct: 55  VRCEKKDKSVVTRVPLDQRWLFEESEINGPDIWNTTWYPKAADHINTEKTWYIVDATDKI 114

Query: 776 LGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGM 597
           LGRLASTIAI+IRGKNLATYTPSVDMGAFVIVVNAEK+AVSGKKRTQKLYRRHSGRPGGM
Sbjct: 115 LGRLASTIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGM 174

Query: 596 TVETFDQLQNRIPERILEHAVRGMLPKGRLGRELFNHLKVYTGPDHPHEAQQPVELPIRD 417
           TVETFDQLQ RIPERI+EHAVRGMLPKGRLGR LFNHLKVYTGP HPHEAQ+P+ELPIRD
Sbjct: 175 TVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYTGPTHPHEAQKPIELPIRD 234

Query: 416 KRIQKQK 396
           KRIQ ++
Sbjct: 235 KRIQMER 241


>emb|CBI20115.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  332 bits (852), Expect = 9e-89
 Identities = 155/179 (86%), Positives = 169/179 (94%)
 Frame = -3

Query: 932 DAATVVPVDQRWMFEGDELNGPDIWNKTWYPKAADHVNTSKTWYVVDATDKILGRLASTI 753
           D A VVP+DQRWMFE  E++GPDIWNKTWYPKAADH+NT KTWY+VDATDKILGRLASTI
Sbjct: 196 DKAAVVPLDQRWMFEQSEVSGPDIWNKTWYPKAADHINTEKTWYIVDATDKILGRLASTI 255

Query: 752 AIHIRGKNLATYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQL 573
           AI+IRGKNLATYTPSVDMG+FVIVVNAEK+AVSGKKRTQKLYRRHSGRPGGM VETFDQL
Sbjct: 256 AIYIRGKNLATYTPSVDMGSFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQL 315

Query: 572 QNRIPERILEHAVRGMLPKGRLGRELFNHLKVYTGPDHPHEAQQPVELPIRDKRIQKQK 396
           Q RIPERI+EHAVRGMLPKGRLGR LFNHLKVY GP HPHEAQ+P++LPIRDKRIQK++
Sbjct: 316 QQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPHHPHEAQKPIDLPIRDKRIQKER 374


>ref|XP_002285616.1| PREDICTED: 50S ribosomal protein L13, chloroplastic [Vitis
           vinifera]
          Length = 235

 Score =  332 bits (852), Expect = 9e-89
 Identities = 155/179 (86%), Positives = 169/179 (94%)
 Frame = -3

Query: 932 DAATVVPVDQRWMFEGDELNGPDIWNKTWYPKAADHVNTSKTWYVVDATDKILGRLASTI 753
           D A VVP+DQRWMFE  E++GPDIWNKTWYPKAADH+NT KTWY+VDATDKILGRLASTI
Sbjct: 57  DKAAVVPLDQRWMFEQSEVSGPDIWNKTWYPKAADHINTEKTWYIVDATDKILGRLASTI 116

Query: 752 AIHIRGKNLATYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQL 573
           AI+IRGKNLATYTPSVDMG+FVIVVNAEK+AVSGKKRTQKLYRRHSGRPGGM VETFDQL
Sbjct: 117 AIYIRGKNLATYTPSVDMGSFVIVVNAEKVAVSGKKRTQKLYRRHSGRPGGMKVETFDQL 176

Query: 572 QNRIPERILEHAVRGMLPKGRLGRELFNHLKVYTGPDHPHEAQQPVELPIRDKRIQKQK 396
           Q RIPERI+EHAVRGMLPKGRLGR LFNHLKVY GP HPHEAQ+P++LPIRDKRIQK++
Sbjct: 177 QQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPHHPHEAQKPIDLPIRDKRIQKER 235


>ref|XP_004146016.1| PREDICTED: 50S ribosomal protein L13, chloroplastic-like [Cucumis
           sativus] gi|449518653|ref|XP_004166351.1| PREDICTED: 50S
           ribosomal protein L13, chloroplastic-like [Cucumis
           sativus]
          Length = 248

 Score =  332 bits (851), Expect = 1e-88
 Identities = 157/174 (90%), Positives = 166/174 (95%)
 Frame = -3

Query: 917 VPVDQRWMFEGDELNGPDIWNKTWYPKAADHVNTSKTWYVVDATDKILGRLASTIAIHIR 738
           VP++QRWMFEGDEL+GPDIWNKTWYPKAADHVNT K WYVVDATDKILGRLASTIA HIR
Sbjct: 75  VPLEQRWMFEGDELDGPDIWNKTWYPKAADHVNTEKPWYVVDATDKILGRLASTIANHIR 134

Query: 737 GKNLATYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQNRIP 558
           GK+L TYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQ RIP
Sbjct: 135 GKDLPTYTPSVDMGAFVIVVNAEKIAVSGKKRTQKLYRRHSGRPGGMTVETFDQLQQRIP 194

Query: 557 ERILEHAVRGMLPKGRLGRELFNHLKVYTGPDHPHEAQQPVELPIRDKRIQKQK 396
           ERI+EHAVRGMLPKGRLGR LFNHLKVY GPDHPHEAQ+PV+LPIRDKRI K++
Sbjct: 195 ERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIRDKRINKER 248


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