BLASTX nr result
ID: Jatropha_contig00040534
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00040534
(601 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm... 144 3e-55
gb|EEE85138.2| zinc finger family protein [Populus trichocarpa] 142 8e-54
ref|XP_002300333.1| predicted protein [Populus trichocarpa] 142 8e-54
ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation spec... 138 6e-53
gb|EOX96971.1| Cleavage and polyadenylation specificity factor 3... 140 2e-52
ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation spec... 138 3e-52
gb|ESR62164.1| hypothetical protein CICLE_v10014454mg [Citrus cl... 139 4e-52
gb|ESR62165.1| hypothetical protein CICLE_v10014454mg [Citrus cl... 139 4e-52
ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation spec... 145 5e-52
gb|EPS64393.1| hypothetical protein M569_10389, partial [Genlise... 142 9e-52
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec... 138 1e-51
ref|XP_004156192.1| PREDICTED: cleavage and polyadenylation spec... 138 1e-51
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec... 145 3e-51
ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation spec... 134 4e-51
ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation spec... 134 4e-51
gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus... 143 1e-49
ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation spec... 141 1e-49
gb|ESQ33824.1| hypothetical protein EUTSA_v10007064mg [Eutrema s... 133 1e-49
gb|ERN07697.1| hypothetical protein AMTR_s00155p00079840 [Ambore... 141 3e-49
ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arab... 133 4e-49
>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
gi|223537608|gb|EEF39232.1| conserved hypothetical
protein [Ricinus communis]
Length = 702
Score = 144 bits (363), Expect(3) = 3e-55
Identities = 63/64 (98%), Positives = 63/64 (98%)
Frame = +1
Query: 334 NQPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 513
NQ GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT
Sbjct: 66 NQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 125
Query: 514 NEDI 525
NEDI
Sbjct: 126 NEDI 129
Score = 63.5 bits (153), Expect(3) = 3e-55
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAKLP
Sbjct: 130 KECNMYKLGFCPNGPDCRYRHAKLP 154
Score = 54.7 bits (130), Expect(3) = 3e-55
Identities = 25/29 (86%), Positives = 28/29 (96%), Gaps = 1/29 (3%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLD-SGPTNPTASLP 239
M+DT+GGLSFDFEGGLD SGPTNPTAS+P
Sbjct: 1 MDDTDGGLSFDFEGGLDSSGPTNPTASIP 29
>gb|EEE85138.2| zinc finger family protein [Populus trichocarpa]
Length = 669
Score = 142 bits (357), Expect(3) = 8e-54
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +1
Query: 337 QPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTN 516
Q GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTN
Sbjct: 64 QAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTN 123
Query: 517 EDI 525
EDI
Sbjct: 124 EDI 126
Score = 63.5 bits (153), Expect(3) = 8e-54
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAKLP
Sbjct: 127 KECNMYKLGFCPNGPDCRYRHAKLP 151
Score = 52.4 bits (124), Expect(3) = 8e-54
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLP 239
MED+EG LSFDFEGGLDSGP NP AS+P
Sbjct: 1 MEDSEGVLSFDFEGGLDSGPANPIASIP 28
>ref|XP_002300333.1| predicted protein [Populus trichocarpa]
Length = 669
Score = 142 bits (357), Expect(3) = 8e-54
Identities = 62/63 (98%), Positives = 62/63 (98%)
Frame = +1
Query: 337 QPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTN 516
Q GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTN
Sbjct: 64 QAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTN 123
Query: 517 EDI 525
EDI
Sbjct: 124 EDI 126
Score = 63.5 bits (153), Expect(3) = 8e-54
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAKLP
Sbjct: 127 KECNMYKLGFCPNGPDCRYRHAKLP 151
Score = 52.4 bits (124), Expect(3) = 8e-54
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLP 239
MED+EG LSFDFEGGLDSGP NP AS+P
Sbjct: 1 MEDSEGVLSFDFEGGLDSGPANPIASIP 28
>ref|XP_006352991.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum tuberosum]
Length = 677
Score = 138 bits (347), Expect(3) = 6e-53
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +1
Query: 346 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 525
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 67 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 126
Score = 63.5 bits (153), Expect(3) = 6e-53
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAKLP
Sbjct: 127 KECNMYKLGFCPNGPDCRYRHAKLP 151
Score = 53.1 bits (126), Expect(3) = 6e-53
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLP 239
M+D EGGL+FDFEGGLD+GPT+PTAS+P
Sbjct: 1 MDDGEGGLNFDFEGGLDTGPTHPTASVP 28
>gb|EOX96971.1| Cleavage and polyadenylation specificity factor 30 [Theobroma
cacao]
Length = 698
Score = 140 bits (352), Expect(3) = 2e-52
Identities = 61/66 (92%), Positives = 62/66 (93%)
Frame = +1
Query: 328 GANQPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK 507
G GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYK
Sbjct: 64 GGGGAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYK 123
Query: 508 HTNEDI 525
HTNEDI
Sbjct: 124 HTNEDI 129
Score = 60.5 bits (145), Expect(3) = 2e-52
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNG DCRYRHAKLP
Sbjct: 130 KECNMYKLGFCPNGADCRYRHAKLP 154
Score = 52.8 bits (125), Expect(3) = 2e-52
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLP 239
M+D+EGGLSFDFEGGLD+GP PTAS+P
Sbjct: 1 MDDSEGGLSFDFEGGLDAGPAAPTASMP 28
>ref|XP_004233145.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum lycopersicum]
Length = 671
Score = 138 bits (347), Expect(3) = 3e-52
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = +1
Query: 346 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 525
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI
Sbjct: 61 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 120
Score = 61.2 bits (147), Expect(3) = 3e-52
Identities = 23/25 (92%), Positives = 25/25 (100%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNM+KLGFCPNGPDCRYRHAK+P
Sbjct: 121 KECNMFKLGFCPNGPDCRYRHAKMP 145
Score = 53.1 bits (126), Expect(3) = 3e-52
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLP 239
M+D EGGL+FDFEGGLD+GPT+PTAS+P
Sbjct: 1 MDDGEGGLNFDFEGGLDTGPTHPTASVP 28
>gb|ESR62164.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
Length = 701
Score = 139 bits (349), Expect(3) = 4e-52
Identities = 60/61 (98%), Positives = 61/61 (100%)
Frame = +1
Query: 343 GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNED 522
GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTNED
Sbjct: 69 GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED 128
Query: 523 I 525
I
Sbjct: 129 I 129
Score = 62.0 bits (149), Expect(3) = 4e-52
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRH KLP
Sbjct: 130 KECNMYKLGFCPNGPDCRYRHVKLP 154
Score = 51.2 bits (121), Expect(3) = 4e-52
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLP 239
MED+EGGLSFDFEGGLD+GP PTAS P
Sbjct: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNP 28
>gb|ESR62165.1| hypothetical protein CICLE_v10014454mg [Citrus clementina]
Length = 672
Score = 139 bits (349), Expect(3) = 4e-52
Identities = 60/61 (98%), Positives = 61/61 (100%)
Frame = +1
Query: 343 GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNED 522
GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTNED
Sbjct: 69 GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED 128
Query: 523 I 525
I
Sbjct: 129 I 129
Score = 62.0 bits (149), Expect(3) = 4e-52
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRH KLP
Sbjct: 130 KECNMYKLGFCPNGPDCRYRHVKLP 154
Score = 51.2 bits (121), Expect(3) = 4e-52
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLP 239
MED+EGGLSFDFEGGLD+GP PTAS P
Sbjct: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNP 28
>ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Glycine max]
Length = 691
Score = 145 bits (367), Expect(3) = 5e-52
Identities = 63/66 (95%), Positives = 64/66 (96%)
Frame = +1
Query: 328 GANQPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK 507
G N PGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYK
Sbjct: 61 GGNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYK 120
Query: 508 HTNEDI 525
HTNEDI
Sbjct: 121 HTNEDI 126
Score = 61.2 bits (147), Expect(3) = 5e-52
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAK P
Sbjct: 127 KECNMYKLGFCPNGPDCRYRHAKSP 151
Score = 44.7 bits (104), Expect(3) = 5e-52
Identities = 21/35 (60%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLPH-PFRQH 257
MED+EG LSFDFEGGLD+ P++ A++P P QH
Sbjct: 1 MEDSEGVLSFDFEGGLDAAPSSAAAAVPSGPLVQH 35
>gb|EPS64393.1| hypothetical protein M569_10389, partial [Genlisea aurea]
Length = 655
Score = 142 bits (359), Expect(3) = 9e-52
Identities = 63/66 (95%), Positives = 63/66 (95%)
Frame = +1
Query: 328 GANQPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK 507
GA GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK
Sbjct: 62 GAGGGGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK 121
Query: 508 HTNEDI 525
HTNEDI
Sbjct: 122 HTNEDI 127
Score = 63.5 bits (153), Expect(3) = 9e-52
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAKLP
Sbjct: 128 KECNMYKLGFCPNGPDCRYRHAKLP 152
Score = 44.7 bits (104), Expect(3) = 9e-52
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +3
Query: 162 DTEGGLSFDFEGGLDSGPTNPTASLP 239
D EGGLSFDFEGGLD+GP T SLP
Sbjct: 2 DDEGGLSFDFEGGLDTGPGQITGSLP 27
>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 707
Score = 138 bits (348), Expect(3) = 1e-51
Identities = 60/64 (93%), Positives = 61/64 (95%)
Frame = +1
Query: 334 NQPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 513
N RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHT
Sbjct: 68 NVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHT 127
Query: 514 NEDI 525
NEDI
Sbjct: 128 NEDI 131
Score = 62.0 bits (149), Expect(3) = 1e-51
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYK GFCPNGPDCRYRHAKLP
Sbjct: 132 KECNMYKFGFCPNGPDCRYRHAKLP 156
Score = 50.1 bits (118), Expect(3) = 1e-51
Identities = 24/30 (80%), Positives = 27/30 (90%), Gaps = 2/30 (6%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNP--TASLP 239
MED+EG LSFDFEGGLD+GPTNP T+SLP
Sbjct: 1 MEDSEGVLSFDFEGGLDAGPTNPAATSSLP 30
>ref|XP_004156192.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 379
Score = 138 bits (348), Expect(3) = 1e-51
Identities = 60/64 (93%), Positives = 61/64 (95%)
Frame = +1
Query: 334 NQPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 513
N RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHT
Sbjct: 68 NVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHT 127
Query: 514 NEDI 525
NEDI
Sbjct: 128 NEDI 131
Score = 62.0 bits (149), Expect(3) = 1e-51
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYK GFCPNGPDCRYRHAKLP
Sbjct: 132 KECNMYKFGFCPNGPDCRYRHAKLP 156
Score = 50.1 bits (118), Expect(3) = 1e-51
Identities = 24/30 (80%), Positives = 27/30 (90%), Gaps = 2/30 (6%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNP--TASLP 239
MED+EG LSFDFEGGLD+GPTNP T+SLP
Sbjct: 1 MEDSEGVLSFDFEGGLDAGPTNPAATSSLP 30
>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Glycine max]
Length = 681
Score = 145 bits (367), Expect(3) = 3e-51
Identities = 63/66 (95%), Positives = 64/66 (96%)
Frame = +1
Query: 328 GANQPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYK 507
G N PGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYK
Sbjct: 61 GGNVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYK 120
Query: 508 HTNEDI 525
HTNEDI
Sbjct: 121 HTNEDI 126
Score = 61.2 bits (147), Expect(3) = 3e-51
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAK P
Sbjct: 127 KECNMYKLGFCPNGPDCRYRHAKSP 151
Score = 42.0 bits (97), Expect(3) = 3e-51
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLPHPFRQH 257
MED+EG LSFDFEGGLD+ P++ A+ P H
Sbjct: 1 MEDSEGVLSFDFEGGLDAAPSSAAAAPSGPLIPH 34
>ref|XP_006359103.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum tuberosum]
Length = 692
Score = 134 bits (337), Expect(3) = 4e-51
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = +1
Query: 346 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 525
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHT EDI
Sbjct: 66 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTIEDI 125
Score = 62.8 bits (151), Expect(3) = 4e-51
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAK+P
Sbjct: 126 KECNMYKLGFCPNGPDCRYRHAKMP 150
Score = 51.6 bits (122), Expect(3) = 4e-51
Identities = 21/28 (75%), Positives = 27/28 (96%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLP 239
M++ EGGL+FDFEGGLD+GPT+PTAS+P
Sbjct: 1 MDEGEGGLNFDFEGGLDTGPTHPTASVP 28
>ref|XP_004231555.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Solanum lycopersicum]
Length = 689
Score = 134 bits (337), Expect(3) = 4e-51
Identities = 58/60 (96%), Positives = 59/60 (98%)
Frame = +1
Query: 346 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 525
RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHT EDI
Sbjct: 65 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTIEDI 124
Score = 62.8 bits (151), Expect(3) = 4e-51
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAK+P
Sbjct: 125 KECNMYKLGFCPNGPDCRYRHAKMP 149
Score = 51.6 bits (122), Expect(3) = 4e-51
Identities = 21/28 (75%), Positives = 27/28 (96%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLP 239
M++ EGGL+FDFEGGLD+GPT+PTAS+P
Sbjct: 1 MDEGEGGLNFDFEGGLDTGPTHPTASVP 28
>gb|ESW19498.1| hypothetical protein PHAVU_006G130200g [Phaseolus vulgaris]
Length = 697
Score = 143 bits (361), Expect(3) = 1e-49
Identities = 62/64 (96%), Positives = 63/64 (98%)
Frame = +1
Query: 334 NQPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 513
N PGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHT
Sbjct: 61 NVPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHT 120
Query: 514 NEDI 525
NEDI
Sbjct: 121 NEDI 124
Score = 61.2 bits (147), Expect(3) = 1e-49
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAK P
Sbjct: 125 KECNMYKLGFCPNGPDCRYRHAKSP 149
Score = 39.3 bits (90), Expect(3) = 1e-49
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLPHPFRQH 257
MED+EG LSFDFEGGLD+ P + A+ P QH
Sbjct: 1 MEDSEGVLSFDFEGGLDTAP-SAAAAPSGPLVQH 33
>ref|XP_004486563.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cicer arietinum]
Length = 677
Score = 141 bits (356), Expect(3) = 1e-49
Identities = 61/64 (95%), Positives = 63/64 (98%)
Frame = +1
Query: 334 NQPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 513
N PGRRSFRQTVCRHWLRSLCMKG+ACGFLHQYDK+RMPVCRFFRLYGECREQDCVYKHT
Sbjct: 58 NIPGRRSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHT 117
Query: 514 NEDI 525
NEDI
Sbjct: 118 NEDI 121
Score = 61.2 bits (147), Expect(3) = 1e-49
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAK P
Sbjct: 122 KECNMYKLGFCPNGPDCRYRHAKSP 146
Score = 41.2 bits (95), Expect(3) = 1e-49
Identities = 20/31 (64%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTN-PTASLPHP 245
MED+EG LSFDFEGGLD+ P + T S+P P
Sbjct: 1 MEDSEGVLSFDFEGGLDAAPPSAATVSVPAP 31
>gb|ESQ33824.1| hypothetical protein EUTSA_v10007064mg [Eutrema salsugineum]
Length = 630
Score = 133 bits (334), Expect(3) = 1e-49
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = +1
Query: 349 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 525
RSFRQTVCRHWLR LCMKGDACGFLHQYDK+RMP+CRFFRLYGECREQDCVYKHTNEDI
Sbjct: 59 RSFRQTVCRHWLRGLCMKGDACGFLHQYDKARMPICRFFRLYGECREQDCVYKHTNEDI 117
Score = 63.5 bits (153), Expect(3) = 1e-49
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAKLP
Sbjct: 118 KECNMYKLGFCPNGPDCRYRHAKLP 142
Score = 47.0 bits (110), Expect(3) = 1e-49
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLP 239
MED +G LSFDFEGGLDSGP PTAS+P
Sbjct: 1 MEDADG-LSFDFEGGLDSGPAQPTASVP 27
>gb|ERN07697.1| hypothetical protein AMTR_s00155p00079840 [Amborella trichopoda]
Length = 701
Score = 141 bits (356), Expect(3) = 3e-49
Identities = 62/64 (96%), Positives = 62/64 (96%)
Frame = +1
Query: 334 NQPGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 513
N GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT
Sbjct: 54 NLQGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHT 113
Query: 514 NEDI 525
NEDI
Sbjct: 114 NEDI 117
Score = 63.5 bits (153), Expect(3) = 3e-49
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAKLP
Sbjct: 118 KECNMYKLGFCPNGPDCRYRHAKLP 142
Score = 37.4 bits (85), Expect(3) = 3e-49
Identities = 18/26 (69%), Positives = 21/26 (80%), Gaps = 1/26 (3%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLD-SGPTNPTA 230
ME+ EGGLSFDFEGGL+ + NPTA
Sbjct: 1 MEEPEGGLSFDFEGGLETTNNPNPTA 26
>ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arabidopsis lyrata subsp.
lyrata] gi|297339460|gb|EFH69877.1| hypothetical protein
ARALYDRAFT_890588 [Arabidopsis lyrata subsp. lyrata]
Length = 631
Score = 133 bits (334), Expect(3) = 4e-49
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = +1
Query: 349 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDI 525
RSFRQTVCRHWLR LCMKGDACGFLHQYDK+RMP+CRFFRLYGECREQDCVYKHTNEDI
Sbjct: 59 RSFRQTVCRHWLRGLCMKGDACGFLHQYDKARMPICRFFRLYGECREQDCVYKHTNEDI 117
Score = 63.5 bits (153), Expect(3) = 4e-49
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = +2
Query: 527 KECNMYKLGFCPNGPDCRYRHAKLP 601
KECNMYKLGFCPNGPDCRYRHAKLP
Sbjct: 118 KECNMYKLGFCPNGPDCRYRHAKLP 142
Score = 45.4 bits (106), Expect(3) = 4e-49
Identities = 21/28 (75%), Positives = 24/28 (85%)
Frame = +3
Query: 156 MEDTEGGLSFDFEGGLDSGPTNPTASLP 239
MED +G LSFDFEGGLDSGP P+AS+P
Sbjct: 1 MEDADG-LSFDFEGGLDSGPAQPSASVP 27