BLASTX nr result

ID: Jatropha_contig00007710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00007710
         (520 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525221.1| arginine/serine-rich splicing factor, putati...   106   3e-21
gb|EEF04598.2| hypothetical protein POPTR_0016s08250g [Populus t...    86   4e-15
gb|EEE92013.2| hypothetical protein POPTR_0006s23170g [Populus t...    84   2e-14
ref|XP_002308491.1| predicted protein [Populus trichocarpa]            84   2e-14
gb|ABK95577.1| unknown [Populus trichocarpa] gi|550336917|gb|EEE...    84   2e-14
ref|XP_002327808.1| predicted protein [Populus trichocarpa]            81   1e-13
gb|ERP61007.1| hypothetical protein POPTR_0005s12535g [Populus t...    64   3e-08

>ref|XP_002525221.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223535518|gb|EEF37187.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 305

 Score =  106 bits (264), Expect = 3e-21
 Identities = 65/125 (52%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
 Frame = -3

Query: 518 RDRSVDIEDRSPSHEPKNGLPSKSRKRSPTPDNGSPRPSPKVRKVDDQQDXXXXXXXXXX 339
           R+RS + EDRS S EPKNG+PSK RKRSPTPD GSPRPSPK RK+DDQQD          
Sbjct: 181 RERSFENEDRSLSREPKNGVPSKGRKRSPTPDEGSPRPSPKSRKLDDQQDRSDYSGSPRR 240

Query: 338 XXXXXXXXPADGRYESPAQTNG--XXXXXXXXXXXXXXXXDYEDNR----------RSPR 195
                   P DGRY SPAQTNG                  DYEDNR          RS R
Sbjct: 241 SRSPDRKSPGDGRYGSPAQTNGRSRSPSPSPRDGRSPVDDDYEDNRRSRSRTRSRSRSAR 300

Query: 194 GSESP 180
           GSESP
Sbjct: 301 GSESP 305


>gb|EEF04598.2| hypothetical protein POPTR_0016s08250g [Populus trichocarpa]
          Length = 290

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 52/111 (46%), Positives = 60/111 (54%)
 Frame = -3

Query: 518 RDRSVDIEDRSPSHEPKNGLPSKSRKRSPTPDNGSPRPSPKVRKVDDQQDXXXXXXXXXX 339
           R+RS + E+RS S EPKN   +K+RKRSPTPD GSPRPSPK RK+DD+QD          
Sbjct: 185 RERSAENENRSLSPEPKN---TKARKRSPTPDEGSPRPSPKSRKMDDEQDREYSGSPRGR 241

Query: 338 XXXXXXXXPADGRYESPAQTNGXXXXXXXXXXXXXXXXDYEDNRRSPRGSE 186
                       RY SP QTNG                DYEDN RSPR S+
Sbjct: 242 SRSPRGE-----RYRSPPQTNGRSRSPSPRDDRSPVDDDYEDNNRSPRDSD 287


>gb|EEE92013.2| hypothetical protein POPTR_0006s23170g [Populus trichocarpa]
          Length = 293

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 54/111 (48%), Positives = 63/111 (56%)
 Frame = -3

Query: 518 RDRSVDIEDRSPSHEPKNGLPSKSRKRSPTPDNGSPRPSPKVRKVDDQQDXXXXXXXXXX 339
           R+RSV+ E+RS S EPK+   +K+RKRSPTPD GSPRPSPK RK+DD+QD          
Sbjct: 185 RERSVENENRSLSPEPKS---TKARKRSPTPDEGSPRPSPKSRKLDDEQD-REYSGSPTG 240

Query: 338 XXXXXXXXPADGRYESPAQTNGXXXXXXXXXXXXXXXXDYEDNRRSPRGSE 186
                   P D RY SP QTNG                DYEDN RSPR S+
Sbjct: 241 RSRSRSRSPRDERYRSP-QTNGRSRIPSPRDDRSPVDDDYEDNNRSPRDSD 290


>ref|XP_002308491.1| predicted protein [Populus trichocarpa]
          Length = 117

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 54/111 (48%), Positives = 63/111 (56%)
 Frame = -3

Query: 518 RDRSVDIEDRSPSHEPKNGLPSKSRKRSPTPDNGSPRPSPKVRKVDDQQDXXXXXXXXXX 339
           R+RSV+ E+RS S EPK+   +K+RKRSPTPD GSPRPSPK RK+DD+QD          
Sbjct: 9   RERSVENENRSLSPEPKS---TKARKRSPTPDEGSPRPSPKSRKLDDEQD-REYSGSPTG 64

Query: 338 XXXXXXXXPADGRYESPAQTNGXXXXXXXXXXXXXXXXDYEDNRRSPRGSE 186
                   P D RY SP QTNG                DYEDN RSPR S+
Sbjct: 65  RSRSRSRSPRDERYRSP-QTNGRSRIPSPRDDRSPVDDDYEDNNRSPRDSD 114


>gb|ABK95577.1| unknown [Populus trichocarpa] gi|550336917|gb|EEE92014.2|
           hypothetical protein POPTR_0006s23170g [Populus
           trichocarpa]
          Length = 252

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 54/111 (48%), Positives = 63/111 (56%)
 Frame = -3

Query: 518 RDRSVDIEDRSPSHEPKNGLPSKSRKRSPTPDNGSPRPSPKVRKVDDQQDXXXXXXXXXX 339
           R+RSV+ E+RS S EPK+   +K+RKRSPTPD GSPRPSPK RK+DD+QD          
Sbjct: 144 RERSVENENRSLSPEPKS---TKARKRSPTPDEGSPRPSPKSRKLDDEQD-REYSGSPTG 199

Query: 338 XXXXXXXXPADGRYESPAQTNGXXXXXXXXXXXXXXXXDYEDNRRSPRGSE 186
                   P D RY SP QTNG                DYEDN RSPR S+
Sbjct: 200 RSRSRSRSPRDERYRSP-QTNGRSRIPSPRDDRSPVDDDYEDNNRSPRDSD 249


>ref|XP_002327808.1| predicted protein [Populus trichocarpa]
          Length = 127

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 53/114 (46%), Positives = 66/114 (57%)
 Frame = -1

Query: 499 LKTGPQAMSQRMVSPPRAGSAAQRLIMVAHALLPKFGKWMISKIDHIVVAQGGGAEALKD 320
           ++TG  A  QR+   PR GS AQ L+  AH LL   GKWM+++I+  V A G  AEAL+ 
Sbjct: 1   MRTGHSAPGQRI---PRQGSVAQHLMKAAHVLLLNLGKWMMNRIESTVAAPGDEAEALEV 57

Query: 319 RALQMGGMKVQLKLMAAAAAPVPGMIGALLMMITRTTAAPLEAVSHRRSAASNG 158
           R     G++V L+LMAAAAA V  MI  L+MMI R T A  E V        NG
Sbjct: 58  R-----GIEVLLRLMAAAAALVQEMIEVLVMMIMRITTAHQEIVMCHVEMQCNG 106


>gb|ERP61007.1| hypothetical protein POPTR_0005s12535g [Populus trichocarpa]
          Length = 105

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 41/86 (47%), Positives = 50/86 (58%)
 Frame = -1

Query: 415 AHALLPKFGKWMISKIDHIVVAQGGGAEALKDRALQMGGMKVQLKLMAAAAAPVPGMIGA 236
           AH LL   GKWM+++I+  V A G  AEAL+ R     G++V L+LMAAAAA V  MI  
Sbjct: 4   AHVLLLNLGKWMMNRIESTVAAPGDEAEALEVR-----GIEVLLRLMAAAAALVQEMIEV 58

Query: 235 LLMMITRTTAAPLEAVSHRRSAASNG 158
           L+MMI R T A  E V        NG
Sbjct: 59  LVMMIMRITTAHQEIVMCHVEMQCNG 84


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