BLASTX nr result

ID: Jatropha_contig00004900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Jatropha_contig00004900
         (260 letters)

Database: NCBI-nr (updated 2014/02/11) 
           35,149,712 sequences; 12,374,887,350 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF04428.2| hypothetical protein POPTR_0016s04670g [Populus t...    76   5e-12
gb|ERP51536.1| hypothetical protein POPTR_0016s04570g [Populus t...    76   5e-12
ref|XP_002322667.1| predicted protein [Populus trichocarpa]            76   5e-12
gb|AFN53709.1| hypothetical protein [Linum usitatissimum]              74   2e-11

>gb|EEF04428.2| hypothetical protein POPTR_0016s04670g [Populus trichocarpa]
          Length = 196

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = +2

Query: 5   GTQQMSAMPGHGTGQPYGGEVDPTGLTRTRPSGLPGDTTGHNPR 136
           GT QMSAMPGHGTGQPYGG+V+  G+ RT P GLPGDTTGHN R
Sbjct: 124 GTHQMSAMPGHGTGQPYGGQVE-EGVARTHPGGLPGDTTGHNTR 166


>gb|ERP51536.1| hypothetical protein POPTR_0016s04570g [Populus trichocarpa]
          Length = 208

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = +2

Query: 5   GTQQMSAMPGHGTGQPYGGEVDPTGLTRTRPSGLPGDTTGHNPR 136
           GT QMSAMPGHGTGQPYGG+V+  G+ RT P GLPGDTTGHN R
Sbjct: 136 GTHQMSAMPGHGTGQPYGGQVE-EGVARTHPGGLPGDTTGHNTR 178


>ref|XP_002322667.1| predicted protein [Populus trichocarpa]
          Length = 175

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 34/44 (77%), Positives = 37/44 (84%)
 Frame = +2

Query: 5   GTQQMSAMPGHGTGQPYGGEVDPTGLTRTRPSGLPGDTTGHNPR 136
           GT QMSAMPGHGTGQPYGG+V+  G+ RT P GLPGDTTGHN R
Sbjct: 103 GTHQMSAMPGHGTGQPYGGQVE-EGVARTHPGGLPGDTTGHNTR 145


>gb|AFN53709.1| hypothetical protein [Linum usitatissimum]
          Length = 163

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 35/54 (64%), Positives = 37/54 (68%)
 Frame = +2

Query: 5   GTQQMSAMPGHGTGQPYGGEVDPTGLTRTRPSGLPGDTTGHNPRV*GMACALAP 166
           GT QMSAMPGHGTGQPYGG VD  G+ R  PSGLPG+ TGHN R  G      P
Sbjct: 110 GTHQMSAMPGHGTGQPYGGHVD-EGVARVHPSGLPGEQTGHNTRTGGTGTGHLP 162


Top