BLASTX nr result
ID: Jatropha_contig00002010
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Jatropha_contig00002010
(563 letters)
Database: NCBI-nr (updated 2014/02/11)
35,149,712 sequences; 12,374,887,350 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 144 8e-58
emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera] 136 1e-54
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 134 4e-54
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 130 7e-53
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera] 131 6e-52
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera] 127 5e-51
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 128 2e-49
emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera] 135 3e-49
emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera] 108 1e-46
emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera] 114 2e-44
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 138 4e-44
emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera] 105 4e-41
gb|AAK29467.1| polyprotein-like [Solanum chilense] 100 1e-39
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 100 8e-39
emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera] 105 2e-38
emb|CAN80131.1| hypothetical protein VITISV_012432 [Vitis vinifera] 124 4e-38
emb|CAN61851.1| hypothetical protein VITISV_036278 [Vitis vinifera] 120 9e-36
emb|CAN65149.1| hypothetical protein VITISV_037085 [Vitis vinifera] 72 2e-34
emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera] 90 3e-33
emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera] 107 5e-33
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 144 bits (362), Expect(3) = 8e-58
Identities = 66/81 (81%), Positives = 69/81 (85%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNR 292
+QFL LVER+TGKKLKCIRTDNGGEY G FD +CKEHGIRHQ TPPKTPQLNGLAERMNR
Sbjct: 528 KQFLTLVERETGKKLKCIRTDNGGEYQGQFDAYCKEHGIRHQFTPPKTPQLNGLAERMNR 587
Query: 293 T*TERVRCLFSHVKLSKRFWG 355
T ER RCL SH KL K FWG
Sbjct: 588 TLIERTRCLLSHSKLPKAFWG 608
Score = 71.6 bits (174), Expect(3) = 8e-58
Identities = 28/48 (58%), Positives = 40/48 (83%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
K F GEAL+TA +++N SPCVPLQY P+++W G+++SYD L+V+GCK
Sbjct: 604 KAFWGEALVTAAYVLNHSPCVPLQYKAPEKIWLGRDISYDQLRVFGCK 651
Score = 55.5 bits (132), Expect(3) = 8e-58
Identities = 24/31 (77%), Positives = 27/31 (87%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERSKLDVKTRQCVFIGY 561
R KA+VH+PKDERSKLDVKTR+CVFIGY
Sbjct: 646 RVFGCKAYVHVPKDERSKLDVKTRECVFIGY 676
>emb|CAN74160.1| hypothetical protein VITISV_018405 [Vitis vinifera]
Length = 1302
Score = 136 bits (342), Expect(3) = 1e-54
Identities = 61/81 (75%), Positives = 70/81 (86%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNR 292
+QF LVERQ+G+KLKCIRTDNGGEY+GPFD +C++HGIRHQ TPPKTPQLNGLAERMNR
Sbjct: 395 KQFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHGIRHQKTPPKTPQLNGLAERMNR 454
Query: 293 T*TERVRCLFSHVKLSKRFWG 355
T ERVRCL S +L + FWG
Sbjct: 455 TLVERVRCLLSQSQLPRSFWG 475
Score = 70.1 bits (170), Expect(3) = 1e-54
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
+ F GEAL T VH++N +PCVPL++D P R+WS +SYD+L+V+GCK
Sbjct: 471 RSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSNNEISYDHLRVFGCK 518
Score = 54.3 bits (129), Expect(3) = 1e-54
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERSKLDVKTRQCVFIGY 561
R KAFVHIPKDERSKLD KTR CVFIGY
Sbjct: 513 RVFGCKAFVHIPKDERSKLDAKTRPCVFIGY 543
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 134 bits (338), Expect(3) = 4e-54
Identities = 60/81 (74%), Positives = 69/81 (85%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNR 292
+QF LVERQ+G+KLKCIRTDNGGEY+GPFD +C++HG RHQ TPPKTPQLNGLAERMNR
Sbjct: 508 KQFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHGFRHQKTPPKTPQLNGLAERMNR 567
Query: 293 T*TERVRCLFSHVKLSKRFWG 355
T ERVRCL S +L + FWG
Sbjct: 568 TLVERVRCLLSQSQLPRSFWG 588
Score = 69.7 bits (169), Expect(3) = 4e-54
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
+ F GEAL T VH++N +PCVPL++D P R+WS +SYD+L+V+GCK
Sbjct: 584 RSFWGEALNTIVHVLNLTPCVPLEFDVPDRIWSNNEISYDHLRVFGCK 631
Score = 54.3 bits (129), Expect(3) = 4e-54
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERSKLDVKTRQCVFIGY 561
R KAFVHIPKDERSKLD KTR CVFIGY
Sbjct: 626 RVFGCKAFVHIPKDERSKLDAKTRPCVFIGY 656
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 130 bits (328), Expect(3) = 7e-53
Identities = 59/81 (72%), Positives = 68/81 (83%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNR 292
+QF LVERQ+G+KLKCIRTDNGGEY+ PFD +C++HGIRHQ T PKTPQLNGLAERMNR
Sbjct: 411 KQFHALVERQSGEKLKCIRTDNGGEYSSPFDEYCRQHGIRHQKTSPKTPQLNGLAERMNR 470
Query: 293 T*TERVRCLFSHVKLSKRFWG 355
T ERVRCL S +L + FWG
Sbjct: 471 TLVERVRCLLSQSQLPRSFWG 491
Score = 69.3 bits (168), Expect(3) = 7e-53
Identities = 27/48 (56%), Positives = 38/48 (79%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
+ F GEAL T VH++N +PCVPL++D P R+WS +SYD+L+V+GCK
Sbjct: 487 RSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSKNEISYDHLRVFGCK 534
Score = 54.3 bits (129), Expect(3) = 7e-53
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERSKLDVKTRQCVFIGY 561
R KAFVHIPKDERSKLD KTR CVFIGY
Sbjct: 529 RVFGCKAFVHIPKDERSKLDAKTRPCVFIGY 559
>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
Length = 1317
Score = 131 bits (329), Expect(3) = 6e-52
Identities = 59/80 (73%), Positives = 68/80 (85%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNR 292
+QF LVERQ+G+KLKCIRTDNGGEY+GPFD +C++H IRHQ TPPKTPQLNGLAERMNR
Sbjct: 479 KQFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCRQHDIRHQKTPPKTPQLNGLAERMNR 538
Query: 293 T*TERVRCLFSHVKLSKRFW 352
T ERVRCL S +L + FW
Sbjct: 539 TLVERVRCLLSQSQLPRSFW 558
Score = 64.3 bits (155), Expect(3) = 6e-52
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
+ F EAL T VH++N +PCVPL++D R+WS +SYD+L+V+GCK
Sbjct: 555 RSFWDEALNTVVHVLNLTPCVPLEFDVSDRIWSNNEISYDHLRVFGCK 602
Score = 55.8 bits (133), Expect(3) = 6e-52
Identities = 26/31 (83%), Positives = 26/31 (83%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERSKLDVKTRQCVFIGY 561
R KAFVHIPKDERSKLDVKTR CVFIGY
Sbjct: 597 RVFGCKAFVHIPKDERSKLDVKTRPCVFIGY 627
>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
Length = 1017
Score = 127 bits (320), Expect(3) = 5e-51
Identities = 57/81 (70%), Positives = 67/81 (82%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNR 292
+QF LVERQ+G+KLKCI+ DNGGEY+ PFD +C++HGIRHQ TPPKTPQLNGLAE MNR
Sbjct: 282 KQFHALVERQSGEKLKCIQIDNGGEYSSPFDEYCRQHGIRHQKTPPKTPQLNGLAESMNR 341
Query: 293 T*TERVRCLFSHVKLSKRFWG 355
T ERVRCL S +L + FWG
Sbjct: 342 TLVERVRCLLSQSQLPRSFWG 362
Score = 69.3 bits (168), Expect(3) = 5e-51
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
+ F GEAL T VHL+N +PCVPL++D P R+WS + YD+L+V+GCK
Sbjct: 358 RSFWGEALNTVVHLLNLTPCVPLEFDVPDRIWSNNEICYDHLRVFGCK 405
Score = 51.2 bits (121), Expect(3) = 5e-51
Identities = 24/31 (77%), Positives = 24/31 (77%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERSKLDVKTRQCVFIGY 561
R KAFVHIPKDE SKLD KTR CVFIGY
Sbjct: 400 RVFGCKAFVHIPKDEISKLDAKTRPCVFIGY 430
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 128 bits (321), Expect(3) = 2e-49
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNR 292
++F LVERQTGKKLKCIRTDNGGEY GPFD +C+ +GIRHQ TPPK PQLNGLAERMNR
Sbjct: 526 KEFHALVERQTGKKLKCIRTDNGGEYCGPFDEYCRRYGIRHQKTPPKIPQLNGLAERMNR 585
Query: 293 T*TERVRCLFSHVKLSKRFW 352
T ERVRC+ KL FW
Sbjct: 586 TIMERVRCMLDDAKLPSSFW 605
Score = 60.8 bits (146), Expect(3) = 2e-49
Identities = 26/46 (56%), Positives = 36/46 (78%)
Frame = +3
Query: 348 FGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
F EA+ TAVH+IN SP + L+ + P +VW GK+VSYD+L+V+GCK
Sbjct: 604 FWAEAVSTAVHVINLSPVIALKNEVPDKVWCGKDVSYDHLRVFGCK 649
Score = 53.9 bits (128), Expect(3) = 2e-49
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERSKLDVKTRQCVFIGY 561
R KAFVH+P+DERSKLD KTRQC+FIGY
Sbjct: 644 RVFGCKAFVHVPRDERSKLDSKTRQCIFIGY 674
>emb|CAN59934.1| hypothetical protein VITISV_001876 [Vitis vinifera]
Length = 1392
Score = 135 bits (339), Expect(3) = 3e-49
Identities = 61/81 (75%), Positives = 69/81 (85%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNR 292
+QF LVERQ+G+KLKCIRTDNGGEY+GPFD +CK+HGIRHQ TPPKTPQLNGLAERMN
Sbjct: 354 KQFHALVERQSGEKLKCIRTDNGGEYSGPFDEYCKQHGIRHQKTPPKTPQLNGLAERMNM 413
Query: 293 T*TERVRCLFSHVKLSKRFWG 355
T ERVRCL S +L + FWG
Sbjct: 414 TLVERVRCLLSQSQLPRSFWG 434
Score = 66.2 bits (160), Expect(3) = 3e-49
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
+ F GEAL T VH++N +PCV L++D P R+WS +SYD+L+V+GCK
Sbjct: 430 RSFWGEALNTVVHVLNLTPCVLLEFDVPDRIWSNNEISYDHLRVFGCK 477
Score = 40.8 bits (94), Expect(3) = 3e-49
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERSKLDVKTR 540
R KAFVHIPKDERSKLD KTR
Sbjct: 472 RVFGCKAFVHIPKDERSKLDAKTR 495
>emb|CAN75724.1| hypothetical protein VITISV_040386 [Vitis vinifera]
Length = 885
Score = 108 bits (271), Expect(3) = 1e-46
Identities = 48/73 (65%), Positives = 57/73 (78%)
Frame = +2
Query: 137 RQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNRT*TERVRC 316
R + +KL+CIRT+NGGEY GPF +C++H IRHQ TPPKTPQLNGL ERMN T ERVRC
Sbjct: 326 RXSXEKLQCIRTNNGGEYFGPFXEYCRQHRIRHQKTPPKTPQLNGLTERMNXTLVERVRC 385
Query: 317 LFSHVKLSKRFWG 355
L S +L + FWG
Sbjct: 386 LLSQSQLPRSFWG 398
Score = 72.0 bits (175), Expect(3) = 1e-46
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
+ F GEAL T VH++N +PCVPL++D P R+WS +SYDYL+V+GCK
Sbjct: 394 RSFWGEALNTVVHVLNLTPCVPLEFDVPDRIWSNNEISYDYLRVFGCK 441
Score = 52.8 bits (125), Expect(3) = 1e-46
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERSKLDVKTRQCVFIGY 561
R KAFVHIPKD+RSKLD KTR CVFIGY
Sbjct: 436 RVFGCKAFVHIPKDKRSKLDAKTRPCVFIGY 466
>emb|CAN66809.1| hypothetical protein VITISV_010919 [Vitis vinifera]
Length = 1183
Score = 114 bits (286), Expect(3) = 2e-44
Identities = 50/71 (70%), Positives = 59/71 (83%)
Frame = +2
Query: 140 QTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNRT*TERVRCL 319
Q+G+KLKCI TDNGGEY GPF+ +C++HGI+HQ TPPKTPQLNGL ERMNRT ERVRCL
Sbjct: 519 QSGEKLKCICTDNGGEYFGPFNKYCRQHGIQHQKTPPKTPQLNGLVERMNRTLVERVRCL 578
Query: 320 FSHVKLSKRFW 352
S +L + FW
Sbjct: 579 LSQSQLPRSFW 589
Score = 60.8 bits (146), Expect(3) = 2e-44
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
+ F EAL T VH++N +PCV L++D P ++WS +SYD+L V+GCK
Sbjct: 586 RSFWSEALNTIVHVLNLTPCVHLEFDVPDKMWSDNEISYDHLXVFGCK 633
Score = 50.8 bits (120), Expect(3) = 2e-44
Identities = 23/26 (88%), Positives = 23/26 (88%)
Frame = +1
Query: 484 KAFVHIPKDERSKLDVKTRQCVFIGY 561
KAFVHI KDERSKLD KTR CVFIGY
Sbjct: 633 KAFVHISKDERSKLDAKTRPCVFIGY 658
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 138 bits (347), Expect(2) = 4e-44
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNR 292
++F LVERQ+GKKLKCIRTDNGGEY GPFD +CK+HGIRH+ TPPKTPQLNGLAERMNR
Sbjct: 523 KEFHVLVERQSGKKLKCIRTDNGGEYCGPFDAYCKQHGIRHEKTPPKTPQLNGLAERMNR 582
Query: 293 T*TERVRCLFSHVKLSKRFWG 355
T ERVRC+ S KL K FWG
Sbjct: 583 TLIERVRCMLSKAKLPKHFWG 603
Score = 66.2 bits (160), Expect(2) = 4e-44
Identities = 29/48 (60%), Positives = 36/48 (75%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
K F GEAL TAVH+IN SP + L + P +VW GKNV YD+L+V+GCK
Sbjct: 599 KHFWGEALYTAVHVINLSPAIALNAEVPDKVWFGKNVKYDHLRVFGCK 646
>emb|CAN61554.1| hypothetical protein VITISV_028479 [Vitis vinifera]
Length = 1144
Score = 105 bits (262), Expect(3) = 4e-41
Identities = 46/61 (75%), Positives = 54/61 (88%)
Frame = +2
Query: 134 ERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNRT*TERVR 313
+RQ+ +KLKCI+TDNGGEY G FD +C+++GIRHQ TPPKTPQLNGLAERMNRT ERVR
Sbjct: 472 QRQSSEKLKCIQTDNGGEYFGSFDEYCRQYGIRHQKTPPKTPQLNGLAERMNRTLVERVR 531
Query: 314 C 316
C
Sbjct: 532 C 532
Score = 61.2 bits (147), Expect(3) = 4e-41
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 357 EALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
EAL VH++N +PCVPL++D+P R+ SG +SYD+L V+GCK
Sbjct: 533 EALNIVVHVLNLTPCVPLEFDDPDRILSGNEISYDHLYVFGCK 575
Score = 48.1 bits (113), Expect(3) = 4e-41
Identities = 22/26 (84%), Positives = 23/26 (88%)
Frame = +1
Query: 484 KAFVHIPKDERSKLDVKTRQCVFIGY 561
KAFVHI KDERSKL+ KTR CVFIGY
Sbjct: 575 KAFVHILKDERSKLNAKTRPCVFIGY 600
>gb|AAK29467.1| polyprotein-like [Solanum chilense]
Length = 1328
Score = 99.8 bits (247), Expect(3) = 1e-39
Identities = 48/82 (58%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTG-PFDTFCKEHGIRHQTTPPKTPQLNGLAERMN 289
++F LVER+TG+K K +RTDNGGEYT F+ +C HGIRH+ T P TPQ NG+AERMN
Sbjct: 531 QKFHALVERETGRKRKRLRTDNGGEYTSREFEEYCSNHGIRHEKTVPGTPQHNGVAERMN 590
Query: 290 RT*TERVRCLFSHVKLSKRFWG 355
RT E+VR + KL K FWG
Sbjct: 591 RTIVEKVRSMLRMAKLPKTFWG 612
Score = 68.2 bits (165), Expect(3) = 1e-39
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
K F GEA+ TA +LINRSP VPL++D P+RVW+ K +SY +L+V+GCK
Sbjct: 608 KTFWGEAVRTACYLINRSPSVPLEFDIPERVWTNKEMSYSHLKVFGCK 655
Score = 42.0 bits (97), Expect(3) = 1e-39
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +1
Query: 484 KAFVHIPKDERSKLDVKTRQCVFIGY 561
KAF H+PK++R+KLD K+ C+FIGY
Sbjct: 655 KAFAHVPKEQRTKLDDKSVPCIFIGY 680
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
TNT 1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
protein product [Nicotiana tabacum]
Length = 1328
Score = 100 bits (249), Expect(3) = 8e-39
Identities = 48/82 (58%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTG-PFDTFCKEHGIRHQTTPPKTPQLNGLAERMN 289
++F LVER+TG+KLK +R+DNGGEYT F+ +C HGIRH+ T P TPQ NG+AERMN
Sbjct: 530 QKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMN 589
Query: 290 RT*TERVRCLFSHVKLSKRFWG 355
RT E+VR + KL K FWG
Sbjct: 590 RTIVEKVRSMLRMAKLPKSFWG 611
Score = 65.9 bits (159), Expect(3) = 8e-39
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
K F GEA+ TA +LINRSP VPL ++ P+RVW+ K VSY +L+V+GC+
Sbjct: 607 KSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCR 654
Score = 40.8 bits (94), Expect(3) = 8e-39
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +1
Query: 484 KAFVHIPKDERSKLDVKTRQCVFIGY 561
+AF H+PK++R+KLD K+ C+FIGY
Sbjct: 654 RAFAHVPKEQRTKLDDKSIPCIFIGY 679
>emb|CAN65281.1| hypothetical protein VITISV_035564 [Vitis vinifera]
Length = 809
Score = 105 bits (261), Expect(3) = 2e-38
Identities = 50/83 (60%), Positives = 63/83 (75%)
Frame = +2
Query: 83 AKLSIIPAANRQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQ 262
AK +++ + + FL +RQ+G+KLKCIRT+NGGEY GPFD +C++HGIRHQ TPPKTPQ
Sbjct: 118 AKKNLLSSMKKGFL---KRQSGEKLKCIRTNNGGEYYGPFDEYCRQHGIRHQKTPPKTPQ 174
Query: 263 LNGLAERMNRT*TERVRCLFSHV 331
LN LAERMN+T ER HV
Sbjct: 175 LNELAERMNKTLVERALNTVVHV 197
Score = 53.1 bits (126), Expect(3) = 2e-38
Identities = 21/42 (50%), Positives = 31/42 (73%)
Frame = +3
Query: 360 ALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
AL T VH++N +PCVPL++D R+WS + YD+L+V+G K
Sbjct: 190 ALNTVVHVLNLTPCVPLEFDVLDRIWSNNEIFYDHLRVFGYK 231
Score = 47.4 bits (111), Expect(3) = 2e-38
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +1
Query: 484 KAFVHIPKDERSKLDVKTRQCVFIGY 561
KAFVHI KDER KLD KTR CVFIGY
Sbjct: 231 KAFVHILKDERFKLDAKTRLCVFIGY 256
>emb|CAN80131.1| hypothetical protein VITISV_012432 [Vitis vinifera]
Length = 881
Score = 124 bits (311), Expect(3) = 4e-38
Identities = 57/81 (70%), Positives = 66/81 (81%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNR 292
+ F L ERQ G+KLKCIRTDNGGEY+GPFD +C++HGIR+Q TPPKTPQLNGLAERMNR
Sbjct: 393 KXFHALAERQXGEKLKCIRTDNGGEYSGPFDEYCRQHGIRNQKTPPKTPQLNGLAERMNR 452
Query: 293 T*TERVRCLFSHVKLSKRFWG 355
T ERVRCL S +L + F G
Sbjct: 453 TLVERVRCLLSQSQLPRXFXG 473
Score = 52.8 bits (125), Expect(3) = 4e-38
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
+ F GE L VH++N +PCV L++D R+W + YD+L+V+GCK
Sbjct: 469 RXFXGEVLNXVVHVLNLAPCVFLKFDVLDRIWLDNEIFYDHLRVFGCK 516
Score = 27.7 bits (60), Expect(3) = 4e-38
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDER 516
R KAFVHIPKDER
Sbjct: 511 RVFGCKAFVHIPKDER 526
>emb|CAN61851.1| hypothetical protein VITISV_036278 [Vitis vinifera]
Length = 973
Score = 120 bits (302), Expect(3) = 9e-36
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +2
Query: 128 LVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNRT*TER 307
++ERQ+G+KLKCIRT NGGEY+GPFD +C++HGIRHQ T PKTPQLN LAERMNRT ER
Sbjct: 394 VLERQSGEKLKCIRTYNGGEYSGPFDEYCRQHGIRHQKTHPKTPQLNVLAERMNRTLVER 453
Query: 308 VRCLFSHVKLSKRFWG 355
VRCL S +L + FWG
Sbjct: 454 VRCLLSQSRLPRSFWG 469
Score = 47.8 bits (112), Expect(3) = 9e-36
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +1
Query: 484 KAFVHIPKDERSKLDVKTRQCVFIG 558
KAFVHIPK ERSKLD KTR CVFIG
Sbjct: 498 KAFVHIPKYERSKLDAKTRPCVFIG 522
Score = 28.1 bits (61), Expect(3) = 9e-36
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDN 422
+ F GEAL T VH++N +P + YD+
Sbjct: 465 RSFWGEALNTVVHVLNLTPYNEIFYDH 491
>emb|CAN65149.1| hypothetical protein VITISV_037085 [Vitis vinifera]
Length = 685
Score = 72.4 bits (176), Expect(3) = 2e-34
Identities = 29/48 (60%), Positives = 39/48 (81%)
Frame = +2
Query: 113 RQFLNLVERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKT 256
+QF VE+Q G+KLKCIRT+NG EY+GPFD +C+++ IRHQ TPP +
Sbjct: 368 KQFHGFVEKQFGEKLKCIRTNNGNEYSGPFDEYCRQYDIRHQKTPPNS 415
Score = 67.4 bits (163), Expect(3) = 2e-34
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
+ F GEAL VH++N +PCVPL++D P R+WS +SYD+L+V+GCK
Sbjct: 424 RSFWGEALNIVVHVLNLTPCVPLEFDVPSRIWSBNEISYDHLRVFGCK 471
Score = 52.4 bits (124), Expect(3) = 2e-34
Identities = 24/31 (77%), Positives = 24/31 (77%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERSKLDVKTRQCVFIGY 561
R K FVHIPKDERSKLD KTR CVFIGY
Sbjct: 466 RVFGCKXFVHIPKDERSKLDAKTRPCVFIGY 496
>emb|CAN77981.1| hypothetical protein VITISV_043416 [Vitis vinifera]
Length = 776
Score = 90.1 bits (222), Expect(3) = 3e-33
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +2
Query: 131 VERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNRT*TERV 310
+ERQTGK+LK +R NG EY GPF+ +C+ HGI+ + KTPQ N +A++MNRT +R+
Sbjct: 599 IERQTGKQLKYVRVYNGHEYRGPFEQYCRSHGIKLEKIVHKTPQQNDVAKKMNRTICDRI 658
Query: 311 RCLFSHVKLSKRFWG 355
RC+ SH KL K F G
Sbjct: 659 RCMLSHAKLLKSFRG 673
Score = 54.3 bits (129), Expect(3) = 3e-33
Identities = 25/49 (51%), Positives = 36/49 (73%)
Frame = +3
Query: 339 LKDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
LK F GEA+ T + LIN SP PL+ D P+RV + K VS+++L+V+GC+
Sbjct: 668 LKSFRGEAMRTTIDLINLSPSYPLEGDLPKRVLTRKFVSFEHLRVFGCR 716
Score = 43.9 bits (102), Expect(3) = 3e-33
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERSKLDVKTRQCVFIGY 561
R + FVH+P+DE KLD KT+QC+F+GY
Sbjct: 711 RVFGCRTFVHVPRDEWYKLDSKTKQCIFLGY 741
>emb|CAN74178.1| hypothetical protein VITISV_029257 [Vitis vinifera]
Length = 623
Score = 107 bits (266), Expect(3) = 5e-33
Identities = 47/75 (62%), Positives = 57/75 (76%)
Frame = +2
Query: 131 VERQTGKKLKCIRTDNGGEYTGPFDTFCKEHGIRHQTTPPKTPQLNGLAERMNRT*TERV 310
VERQTGK+LK +R +NGGEY G F+ +CK HGI + T PKTPQ NG+ ERMNRT +R+
Sbjct: 167 VERQTGKQLKSVRANNGGEYRGLFEXYCKSHGIXLEKTVPKTPQQNGVVERMNRTICDRI 226
Query: 311 RCLFSHVKLSKRFWG 355
RC+ SH KL K FWG
Sbjct: 227 RCMLSHAKLPKSFWG 241
Score = 57.4 bits (137), Expect(3) = 5e-33
Identities = 25/48 (52%), Positives = 36/48 (75%)
Frame = +3
Query: 342 KDFGGEALLTAVHLINRSPCVPLQYDNPQRVWSGKNVSYDYLQVYGCK 485
K F GEA+ T V LIN SP PL+ D +R+W+GK VS+++L+V+GC+
Sbjct: 237 KSFWGEAMRTVVDLINLSPSYPLEGDILERIWTGKFVSFEHLRVFGCR 284
Score = 23.1 bits (48), Expect(3) = 5e-33
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 469 RCMVAKAFVHIPKDERS 519
R +AFVH+P+D R+
Sbjct: 279 RVFGCRAFVHVPRDXRN 295