BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00027251
         (300 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OAY64866.1 DNA-directed RNA polymerases II and IV subunit 5A, pa...    72   1e-14
XP_004353942.1 RNA polymerase Rpb5, Cterminal domain containing ...    75   1e-14
XP_013234561.1 DNA-directed RNA polymerases I, II, and III subun...    73   2e-14
XP_013333134.1 DNA-directed RNA polymerases I, II, and III subun...    73   2e-14
CDJ53553.1 DNA-directed RNA polymerases I, II, and III subunit R...    73   4e-14
XP_019457847.1 PREDICTED: DNA-directed RNA polymerases II and IV...    74   4e-14
XP_019422262.1 PREDICTED: DNA-directed RNA polymerases II and IV...    74   4e-14
XP_007013105.2 PREDICTED: DNA-directed RNA polymerases II and IV...    72   5e-14
AFK41303.1 unknown [Medicago truncatula]                               74   5e-14
ACF80672.1 unknown [Zea mays]                                          72   6e-14
XP_006451217.1 hypothetical protein CICLE_v10009504mg [Citrus cl...    72   6e-14
XP_017240287.1 PREDICTED: DNA-directed RNA polymerases II and IV...    73   8e-14
EOY30724.1 Eukaryotic rpb5 RNA polymerase subunit family protein...    72   1e-13
KQK10218.1 hypothetical protein BRADI_2g52777 [Brachypodium dist...    72   1e-13
XP_017437926.1 PREDICTED: DNA-directed RNA polymerases II and IV...    72   1e-13
XP_016550376.1 PREDICTED: DNA-directed RNA polymerases II and IV...    72   1e-13
XP_016165962.1 PREDICTED: DNA-directed RNA polymerases II and IV...    73   1e-13
XP_016184160.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ...    73   1e-13
KYP68466.1 DNA-directed RNA polymerases I, II, and III subunit R...    73   1e-13
KYP66958.1 DNA-directed RNA polymerases I, II, and III subunit R...    73   1e-13

>OAY64866.1 DNA-directed RNA polymerases II and IV subunit 5A, partial [Ananas
           comosus]
          Length = 79

 Score = 72.0 bits (175), Expect = 1e-14
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D ++RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 38  QLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 79


>XP_004353942.1 RNA polymerase Rpb5, Cterminal domain containing protein
           [Acanthamoeba castellanii str. Neff] ELR24265.1 RNA
           polymerase Rpb5, Cterminal domain containing protein
           [Acanthamoeba castellanii str. Neff]
          Length = 204

 Score = 75.1 bits (183), Expect = 1e-14
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D V+RYYGLQ GQVVKIIRPSETAGRYVTYR+V+
Sbjct: 163 QLPRIQVNDPVARYYGLQKGQVVKIIRPSETAGRYVTYRLVV 204


>XP_013234561.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1,
           putative [Eimeria tenella] CDJ43812.1 DNA-directed RNA
           polymerases I, II, and III subunit RPABC1, putative
           [Eimeria tenella]
          Length = 117

 Score = 72.8 bits (177), Expect = 2e-14
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D VSRY+GL  GQVVKIIRPSETAGRYVTYR+V+
Sbjct: 76  QLPRIQVADPVSRYFGLSRGQVVKIIRPSETAGRYVTYRLVV 117


>XP_013333134.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1,
           putative [Eimeria maxima] CDJ56483.1 DNA-directed RNA
           polymerases I, II, and III subunit RPABC1, putative
           [Eimeria maxima]
          Length = 126

 Score = 72.8 bits (177), Expect = 2e-14
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D VSRY+GL  GQVVKIIRPSETAGRYVTYR+V+
Sbjct: 85  QLPRIQVADPVSRYFGLSRGQVVKIIRPSETAGRYVTYRLVV 126


>CDJ53553.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1,
           putative [Eimeria brunetti]
          Length = 154

 Score = 72.8 bits (177), Expect = 4e-14
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D VSRY+GL  GQVVKIIRPSETAGRYVTYR+V+
Sbjct: 113 QLPRIQVADPVSRYFGLSRGQVVKIIRPSETAGRYVTYRLVV 154


>XP_019457847.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Lupinus angustifolius] OIW03693.1 hypothetical protein
           TanjilG_30757 [Lupinus angustifolius]
          Length = 206

 Score = 73.9 bits (180), Expect = 4e-14
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D VSRYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 165 QLPRIQVTDPVSRYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206


>XP_019422262.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Lupinus angustifolius] OIV94154.1 hypothetical protein
           TanjilG_31579 [Lupinus angustifolius]
          Length = 206

 Score = 73.9 bits (180), Expect = 4e-14
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D VSRYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 165 QLPRIQVTDPVSRYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206


>XP_007013105.2 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
           isoform X2 [Theobroma cacao]
          Length = 146

 Score = 72.4 bits (176), Expect = 5e-14
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D ++RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 105 QLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 146


>AFK41303.1 unknown [Medicago truncatula]
          Length = 206

 Score = 73.6 bits (179), Expect = 5e-14
 Identities = 34/42 (80%), Positives = 39/42 (92%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D V+RYYGL+ GQVVKIIRPSETAGRYVTYR+V+
Sbjct: 165 QLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRLVV 206


>ACF80672.1 unknown [Zea mays]
          Length = 127

 Score = 71.6 bits (174), Expect = 6e-14
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQ+ D ++RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 86  QLPRIQITDPIARYYGLRRGQVVKIIRPSETAGRYVTYRYVV 127


>XP_006451217.1 hypothetical protein CICLE_v10009504mg [Citrus clementina]
           ESR64457.1 hypothetical protein CICLE_v10009504mg
           [Citrus clementina]
          Length = 146

 Score = 72.0 bits (175), Expect = 6e-14
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D ++RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 105 QLPRIQVTDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 146


>XP_017240287.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Daucus carota subsp. sativus] XP_017240288.1 PREDICTED:
           DNA-directed RNA polymerases II and IV subunit 5A-like
           [Daucus carota subsp. sativus] XP_017240289.1 PREDICTED:
           DNA-directed RNA polymerases II and IV subunit 5A-like
           [Daucus carota subsp. sativus] KZN03304.1 hypothetical
           protein DCAR_012060 [Daucus carota subsp. sativus]
          Length = 206

 Score = 73.2 bits (178), Expect = 8e-14
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQ+ D V+RYYGLQ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 165 QLPRIQLSDPVARYYGLQRGQVVKIIRPSETAGRYVTYRYVV 206


>EOY30724.1 Eukaryotic rpb5 RNA polymerase subunit family protein isoform 2,
           partial [Theobroma cacao]
          Length = 181

 Score = 72.4 bits (176), Expect = 1e-13
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D ++RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 140 QLPRIQVSDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 181


>KQK10218.1 hypothetical protein BRADI_2g52777 [Brachypodium distachyon]
          Length = 149

 Score = 71.6 bits (174), Expect = 1e-13
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQ+ D ++RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 108 QLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 149


>XP_017437926.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Vigna angularis]
          Length = 184

 Score = 72.4 bits (176), Expect = 1e-13
 Identities = 33/42 (78%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPR+QV D V+RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 143 QLPRVQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 184


>XP_016550376.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           isoform X2 [Capsicum annuum]
          Length = 168

 Score = 72.0 bits (175), Expect = 1e-13
 Identities = 32/43 (74%), Positives = 39/43 (90%)
 Frame = +2

Query: 17  WELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           ++LPRIQ+ D ++RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 126 FQLPRIQITDPIARYYGLKRGQVVKIIRPSETAGRYVTYRYVV 168


>XP_016165962.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
           [Arachis ipaensis] XP_016165963.1 PREDICTED:
           DNA-directed RNA polymerases II and IV subunit 5A-like
           [Arachis ipaensis]
          Length = 206

 Score = 72.8 bits (177), Expect = 1e-13
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D V+RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 165 QLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206


>XP_016184160.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II and
           IV subunit 5A-like [Arachis ipaensis]
          Length = 206

 Score = 72.8 bits (177), Expect = 1e-13
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D V+RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 165 QLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206


>KYP68466.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Cajanus
           cajan]
          Length = 206

 Score = 72.8 bits (177), Expect = 1e-13
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D V+RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 165 QLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206


>KYP66958.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Cajanus
           cajan]
          Length = 206

 Score = 72.8 bits (177), Expect = 1e-13
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +2

Query: 20  ELPRIQVKDHVSRYYGLQHGQVVKIIRPSETAGRYVTYRIVI 145
           +LPRIQV D V+RYYGL+ GQVVKIIRPSETAGRYVTYR V+
Sbjct: 165 QLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 206