BLASTX nr result

ID: Glycyrrhiza36_contig00019176 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00019176
         (234 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU47186.1 hypothetical protein TSUD_350510 [Trifolium subterran...    54   4e-14
KYP54665.1 Arginine/serine-rich-splicing factor RSP31 [Cajanus c...    69   5e-12

>GAU47186.1 hypothetical protein TSUD_350510 [Trifolium subterraneum]
          Length = 291

 Score = 54.3 bits (129), Expect(2) = 4e-14
 Identities = 24/26 (92%), Positives = 24/26 (92%)
 Frame = -2

Query: 161 LLCNFFLEGNLPACLLSFYPQICIFS 84
           L  NFFLEGNLPACLLSFYPQICIFS
Sbjct: 53  LSANFFLEGNLPACLLSFYPQICIFS 78



 Score = 50.8 bits (120), Expect(2) = 4e-14
 Identities = 26/30 (86%), Positives = 27/30 (90%)
 Frame = -3

Query: 232 RVDMKSGTSTKGKYAELLSWFANLFSAIFF 143
           RVDMKSGT+TKGKYAELLSW ANL SA FF
Sbjct: 30  RVDMKSGTTTKGKYAELLSWLANL-SANFF 58


>KYP54665.1 Arginine/serine-rich-splicing factor RSP31 [Cajanus cajan]
          Length = 354

 Score = 68.9 bits (167), Expect = 5e-12
 Identities = 41/72 (56%), Positives = 47/72 (65%)
 Frame = -3

Query: 232 RVDMKSGTSTKGKYAELLSWFANLFSAIFFWKETFLLVCSPSIHRSAFSHLMLIRHSLPS 53
           RVDMKSG +  G     +     L   IFFWKETFLLVC PS +RSAFSHL +IRHSL S
Sbjct: 30  RVDMKSGKTLGGNMLSKVLACQPL--PIFFWKETFLLVCPPSTYRSAFSHL-IIRHSLTS 86

Query: 52  SPNIDIFIPSEC 17
           S + +I I  EC
Sbjct: 87  SSSPNIDISPEC 98


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