BLASTX nr result

ID: Glycyrrhiza36_contig00018540 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00018540
         (468 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU44488.1 hypothetical protein TSUD_12990 [Trifolium subterraneum]    60   1e-07
XP_013466829.1 PPR superfamily protein [Medicago truncatula] KEH...    55   5e-07
XP_013466853.1 pentatricopeptide (PPR) repeat protein [Medicago ...    57   6e-07
XP_004517198.1 PREDICTED: pentatricopeptide repeat-containing pr...    56   3e-06

>GAU44488.1 hypothetical protein TSUD_12990 [Trifolium subterraneum]
          Length = 443

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = +3

Query: 6   PNVDIYEALITSHVQKGNGVRALQLRDEMASLEL*H 113
           PNV IYE LIT+H+QKGNG RALQLR+EMASLEL H
Sbjct: 407 PNVTIYETLITAHMQKGNGDRALQLRNEMASLELQH 442


>XP_013466829.1 PPR superfamily protein [Medicago truncatula] KEH40870.1 PPR
           superfamily protein [Medicago truncatula]
          Length = 95

 Score = 54.7 bits (130), Expect = 5e-07
 Identities = 28/37 (75%), Positives = 28/37 (75%)
 Frame = +3

Query: 6   PNVDIYEALITSHVQKGNGVRALQLRDEMASLEL*HS 116
           PNV IYE LIT H QKGN   ALQLR EMASLEL HS
Sbjct: 59  PNVSIYETLITGHAQKGNNDSALQLRIEMASLELQHS 95


>XP_013466853.1 pentatricopeptide (PPR) repeat protein [Medicago truncatula]
           KEH40894.1 pentatricopeptide (PPR) repeat protein
           [Medicago truncatula]
          Length = 263

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 28/34 (82%), Positives = 29/34 (85%)
 Frame = +3

Query: 6   PNVDIYEALITSHVQKGNGVRALQLRDEMASLEL 107
           PNV IYE LIT HVQKGN VRA QLR+EMASLEL
Sbjct: 227 PNVGIYETLITCHVQKGNSVRAFQLRNEMASLEL 260


>XP_004517198.1 PREDICTED: pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cicer arietinum] XP_012570083.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g66345, mitochondrial-like [Cicer arietinum]
           XP_012570085.1 PREDICTED: pentatricopeptide
           repeat-containing protein At1g66345, mitochondrial-like
           [Cicer arietinum] XP_012570087.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cicer arietinum] XP_012570090.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g66345, mitochondrial-like [Cicer arietinum]
           XP_012570092.1 PREDICTED: pentatricopeptide
           repeat-containing protein At1g66345, mitochondrial-like
           [Cicer arietinum] XP_012570094.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cicer arietinum] XP_012570096.1
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g66345, mitochondrial-like [Cicer arietinum]
           XP_012570098.1 PREDICTED: pentatricopeptide
           repeat-containing protein At1g66345, mitochondrial-like
           [Cicer arietinum] XP_012567888.1 PREDICTED:
           pentatricopeptide repeat-containing protein At1g66345,
           mitochondrial-like [Cicer arietinum]
          Length = 551

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = +3

Query: 6   PNVDIYEALITSHVQKGNGVRALQLRDEMASLEL*HS 116
           PNV+IYE LI  HVQKGN  RALQLR+EMASLE  HS
Sbjct: 515 PNVNIYETLIACHVQKGNNDRALQLRNEMASLESQHS 551


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