BLASTX nr result

ID: Glycyrrhiza36_contig00015837 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza36_contig00015837
         (412 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDO63899.1 hypothetical protein CISIN_1g038960mg [Citrus sinensis]     53   5e-06
JAU70462.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulesc...    54   7e-06
XP_006401381.1 hypothetical protein EUTSA_v10013799mg [Eutrema s...    54   9e-06
JAU24964.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulesc...    54   9e-06
JAU80090.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulesc...    54   9e-06

>KDO63899.1 hypothetical protein CISIN_1g038960mg [Citrus sinensis]
          Length = 158

 Score = 53.1 bits (126), Expect = 5e-06
 Identities = 21/50 (42%), Positives = 29/50 (58%)
 Frame = -2

Query: 216 IYSYFIKSCHCGVVADIKVSNTQQNPKRLFYTCKNRACTFFKWCNPISME 67
           I  ++ K C CG  A IK+S T  NP ++FY C+   C FF+W +P   E
Sbjct: 41  IIKFYNKRCCCGYKAVIKISQTPDNPHKVFYNCRTSRCGFFRWWSPTDNE 90


>JAU70462.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulescens]
          Length = 275

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -2

Query: 192 CHCGV-VADIKVSNTQQNPKRLFYTC-KNRACTFFKWCNPISMEQM 61
           CHCG     IKVSNTQ+NP R FY C   + CTFFKWC+ ++ E +
Sbjct: 36  CHCGGGFCQIKVSNTQENPGRKFYKCPAAQNCTFFKWCDKVTDEDI 81


>XP_006401381.1 hypothetical protein EUTSA_v10013799mg [Eutrema salsugineum]
           ESQ42834.1 hypothetical protein EUTSA_v10013799mg
           [Eutrema salsugineum]
          Length = 384

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
 Frame = -2

Query: 198 KSCHCGV-VADIKVSNTQQNPKRLFYTCKNR----ACTFFKWCNPISMEQMHHQSNDSEV 34
           K+C CGV V  I  SNTQ+NP R FY C NR     C FF+WC+ +        ++ S  
Sbjct: 101 KNCPCGVGVCLILTSNTQKNPGRKFYKCPNREENGGCGFFQWCDAVQSSGTQPGTHHSYG 160

Query: 33  NTEDTKW 13
           NT ++K+
Sbjct: 161 NTNESKF 167


>JAU24964.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulescens]
          Length = 436

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -2

Query: 192 CHCGV-VADIKVSNTQQNPKRLFYTC-KNRACTFFKWCNPISMEQM 61
           CHCG     IKVSNTQ+NP R FY C   + CTFFKWC+ ++ E +
Sbjct: 36  CHCGGGFCQIKVSNTQENPGRKFYKCPAAQNCTFFKWCDKVTDEDI 81


>JAU80090.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulescens]
          Length = 440

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
 Frame = -2

Query: 192 CHCGV-VADIKVSNTQQNPKRLFYTC-KNRACTFFKWCNPISMEQM 61
           CHCG     IKVSNTQ+NP R FY C   + CTFFKWC+ ++ E +
Sbjct: 41  CHCGGGFCQIKVSNTQENPGRKFYKCPAAQNCTFFKWCDKVTDEDI 86


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