BLASTX nr result

ID: Glycyrrhiza35_contig00022582 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza35_contig00022582
         (359 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP59936.1 Putative ribonuclease H protein At1g65750 family [Caj...    44   1e-08
GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterran...    39   2e-06

>KYP59936.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
          Length = 116

 Score = 43.9 bits (102), Expect(3) = 1e-08
 Identities = 20/45 (44%), Positives = 29/45 (64%)
 Frame = -3

Query: 354 SKGFQKIIVETDSLAAKNLILGDSSVLHPCFNLVKEI*TAYGVGG 220
           ++GF K++VE+DSL A  L+    S  HPCF+LV+ I +    GG
Sbjct: 16  NRGFTKLVVESDSLLAVGLLQNGCSSCHPCFSLVQSILSFVAAGG 60



 Score = 32.3 bits (72), Expect(3) = 1e-08
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = -1

Query: 218 DTKLLHTLREANQVAYGFANYG 153
           D +  H LREANQVA G ANYG
Sbjct: 61  DFECRHILREANQVADGLANYG 82



 Score = 29.3 bits (64), Expect(3) = 1e-08
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 133 NCIIFDVIPSFASLVIVADGSGTFFPRGY 47
           N  +F+ +  F SLV++AD S T F RG+
Sbjct: 88  NLHVFENVMPFISLVVLADVSSTIFLRGF 116


>GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterraneum]
          Length = 1250

 Score = 38.5 bits (88), Expect(3) = 2e-06
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -2

Query: 148  MDLDLNCIIFDVIPSFASLVIVADGSGTFFPRGY 47
            + L  NCIIFD +P F  + ++AD  G  FPRG+
Sbjct: 1217 LSLSNNCIIFDHVPGFLVMPLMADSVGIGFPRGF 1250



 Score = 34.3 bits (77), Expect(3) = 2e-06
 Identities = 16/36 (44%), Positives = 25/36 (69%)
 Frame = -3

Query: 357  RSKGFQKIIVETDSLAAKNLILGDSSVLHPCFNLVK 250
            ++KG ++I VE+DS+ A NLI    +  HP F+LV+
Sbjct: 1149 KNKGLKRIRVESDSMIAINLIRNGCNKEHPAFHLVQ 1184



 Score = 25.0 bits (53), Expect(3) = 2e-06
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 239  QLMELEEDTKLLHTLREANQVAYGFANYGMN 147
            +L E  E     HT REANQVA   A + ++
Sbjct: 1188 RLTEGMESVLWQHTWREANQVADALAKFSLS 1218


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