BLASTX nr result

ID: Glycyrrhiza34_contig00029873 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00029873
         (314 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ERM97418.1 hypothetical protein AMTR_s00251p00013890 [Amborella ...    80   3e-17
ERN18203.1 hypothetical protein AMTR_s00054p00223760, partial [A...    58   4e-09
NP_064043.1 orf112a gene product (mitochondrion) [Beta vulgaris ...    55   1e-07

>ERM97418.1 hypothetical protein AMTR_s00251p00013890 [Amborella trichopoda]
          Length = 111

 Score = 79.7 bits (195), Expect = 3e-17
 Identities = 39/57 (68%), Positives = 45/57 (78%)
 Frame = +2

Query: 140 GIDHYSK*SQAENCCSLERRSAEVVPIIEVRVWD*AFRMIKKKKCLVSLEKPTQISY 310
           GIDHYS+ S+AENCCSLER S E +P  EVRVWD AF+MIK +K  VSL +P QISY
Sbjct: 55  GIDHYSQFSKAENCCSLERLSVEGIPTTEVRVWDWAFQMIKTQKFFVSLIEPMQISY 111


>ERN18203.1 hypothetical protein AMTR_s00054p00223760, partial [Amborella
           trichopoda]
          Length = 67

 Score = 57.8 bits (138), Expect = 4e-09
 Identities = 26/33 (78%), Positives = 30/33 (90%)
 Frame = +2

Query: 143 IDHYSK*SQAENCCSLERRSAEVVPIIEVRVWD 241
           IDHYS+ S+AENCCSLE RSA+VVP I+VRVWD
Sbjct: 35  IDHYSQFSKAENCCSLECRSAKVVPTIDVRVWD 67


>NP_064043.1 orf112a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] BAA99353.1 orf112a (mitochondrion) [Beta
           vulgaris subsp. vulgaris]
          Length = 112

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 25/27 (92%), Positives = 25/27 (92%)
 Frame = +3

Query: 3   GTYLPPVSISCQVCSPDIDYVQGSTLG 83
           GT LPPVSISCQVC PDIDYVQGSTLG
Sbjct: 79  GTSLPPVSISCQVCFPDIDYVQGSTLG 105


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