BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00029642
         (275 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP40438.1 Putative ribonuclease H protein At1g65750 family, par...    41   6e-07
KHN24231.1 Putative ribonuclease H protein [Glycine soja]              44   2e-06
KYP39536.1 Putative ribonuclease H protein At1g65750 family, par...    39   4e-06

>KYP40438.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
            cajan]
          Length = 1356

 Score = 41.2 bits (95), Expect(2) = 6e-07
 Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -3

Query: 195  QVWNKLMGDRLVGLFFQFTPQQWLQSNLQLDEERSGLPWCLLFGNIVD-LWQRRNDLIFN 19
            ++W  +  + L+  FF      WLQ NL   + R    WCL F  I+D LW+ RN ++F 
Sbjct: 1093 EIWRAMGTEGLLNEFFNLPLLTWLQENLTHVDPR----WCLSFVIIMDSLWRARNTIVFQ 1148

Query: 18   Q 16
            Q
Sbjct: 1149 Q 1149



 Score = 39.3 bits (90), Expect(2) = 6e-07
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -2

Query: 271  QDANCPRCNNSCESLLHVLRDCSFVTSLEQADG 173
            Q  NCP CNN  E+++H+LRDC     + +A G
Sbjct: 1067 QSGNCPVCNNESETIIHILRDCIEAKEIWRAMG 1099


>KHN24231.1 Putative ribonuclease H protein [Glycine soja]
          Length = 317

 Score = 43.9 bits (102), Expect(2) = 2e-06
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
 Frame = -3

Query: 195 QVWNKLMGDRLVGLFFQFTPQQWLQSNLQLDEERSGLPWCLLFG-NIVDLWQRRNDLIFN 19
           QVWN L G+ L  LF      QWL SNL+  +      W L F   I  +W+ RN++IF+
Sbjct: 196 QVWNTLSGNSLNHLFCAHDCPQWLVSNLRSPQNCEENNWALFFVITISFIWKARNEMIFS 255

Query: 18  QK 13
            +
Sbjct: 256 NR 257



 Score = 35.0 bits (79), Expect(2) = 2e-06
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 274 AQDANCPRCNNSCESLLHVLRDCSF 200
           A+ + CPRC+   ES+LH LRDC +
Sbjct: 169 AESSECPRCHLQPESILHCLRDCFY 193


>KYP39536.1 Putative ribonuclease H protein At1g65750 family, partial [Cajanus
           cajan]
          Length = 111

 Score = 39.3 bits (90), Expect(2) = 4e-06
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
 Frame = -3

Query: 195 QVWNKLMGDRLVGLFFQFTPQQWLQSNLQLDEERSGLPWCLLFGNIVD-LWQRRNDLIFN 19
           ++W  +  +  +  FF      WLQ NL   + R    WCL F  ++D LW+ RN ++F 
Sbjct: 49  EIWRAIGTEGFLNEFFNVLLVTWLQENLTHVDPR----WCLSFVIVMDSLWRARNSIVFQ 104

Query: 18  Q 16
           Q
Sbjct: 105 Q 105



 Score = 38.5 bits (88), Expect(2) = 4e-06
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 268 DANCPRCNNSCESLLHVLRDCSFVTSLEQADG 173
           + NCP CNN  E+++H+LRDC+    + +A G
Sbjct: 24  NGNCPVCNNHSETIMHILRDCNEAKEIWRAIG 55