BLASTX nr result

ID: Glycyrrhiza34_contig00029208 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00029208
         (287 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003624775.2 F-box protein SKIP24 [Medicago truncatula] AES809...    52   9e-07
XP_006604274.1 PREDICTED: F-box protein SKIP24 isoform X2 [Glyci...    54   2e-06
XP_003554063.1 PREDICTED: F-box protein SKIP24 isoform X1 [Glyci...    54   3e-06
AFK35078.1 unknown [Lotus japonicus]                                   53   3e-06
AFK35084.1 unknown [Lotus japonicus]                                   53   5e-06
XP_003624758.2 F-box SKIP24-like protein [Medicago truncatula] A...    52   8e-06

>XP_003624775.2 F-box protein SKIP24 [Medicago truncatula] AES80993.2 F-box protein
           SKIP24 [Medicago truncatula]
          Length = 103

 Score = 52.4 bits (124), Expect = 9e-07
 Identities = 22/32 (68%), Positives = 25/32 (78%)
 Frame = +2

Query: 2   KYHPLREHMPVSGGENEHKIKRKKLKICNGQE 97
           K HPL+ H PV GGENEHK+K+KKLK CN  E
Sbjct: 65  KSHPLQNHKPVGGGENEHKVKQKKLKSCNDCE 96


>XP_006604274.1 PREDICTED: F-box protein SKIP24 isoform X2 [Glycine max] KRG94938.1
           hypothetical protein GLYMA_19G119400 [Glycine max]
          Length = 238

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +2

Query: 2   KYHPLREHMPVSGGENEHKIKRKKLKICN 88
           KYHP++EH P SGGENEH +KRKKLKICN
Sbjct: 210 KYHPVQEHKPTSGGENEH-VKRKKLKICN 237


>XP_003554063.1 PREDICTED: F-box protein SKIP24 isoform X1 [Glycine max] KHN34623.1
           F-box protein SKIP24 [Glycine soja] KRG94937.1
           hypothetical protein GLYMA_19G119400 [Glycine max]
          Length = 267

 Score = 53.5 bits (127), Expect = 3e-06
 Identities = 23/29 (79%), Positives = 26/29 (89%)
 Frame = +2

Query: 2   KYHPLREHMPVSGGENEHKIKRKKLKICN 88
           KYHP++EH P SGGENEH +KRKKLKICN
Sbjct: 210 KYHPVQEHKPTSGGENEH-VKRKKLKICN 237


>AFK35078.1 unknown [Lotus japonicus]
          Length = 257

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 25/37 (67%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
 Frame = +2

Query: 2   KYHPLREHMPVSGGENEHKIKRKKLKICNG-QEKALK 109
           KYHPL+EH PVSG ENEH + RKK K CN  QEK  K
Sbjct: 219 KYHPLQEHKPVSGRENEHNVTRKKSKSCNSLQEKKYK 255


>AFK35084.1 unknown [Lotus japonicus]
          Length = 257

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 25/37 (67%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
 Frame = +2

Query: 2   KYHPLREHMPVSGGENEHKIKRKKLKICN-GQEKALK 109
           KYHPL+EH PVSG ENEH + RKK K CN  QEK  K
Sbjct: 219 KYHPLQEHEPVSGRENEHNVTRKKSKSCNSSQEKKYK 255


>XP_003624758.2 F-box SKIP24-like protein [Medicago truncatula] AES80976.2 F-box
           SKIP24-like protein [Medicago truncatula]
          Length = 241

 Score = 52.0 bits (123), Expect = 8e-06
 Identities = 22/32 (68%), Positives = 24/32 (75%)
 Frame = +2

Query: 2   KYHPLREHMPVSGGENEHKIKRKKLKICNGQE 97
           K HPL+ H PV GGENEHK+KRK LK CN  E
Sbjct: 204 KSHPLQNHKPVGGGENEHKVKRKMLKSCNNCE 235


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