BLASTX nr result

ID: Glycyrrhiza34_contig00029073 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00029073
         (275 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BAD66717.1 orf169 (mitochondrion) [Beta vulgaris subsp. vulgaris]      49   4e-10
NP_064093.1 orf211 gene product (mitochondrion) [Beta vulgaris s...    49   1e-09
YP_004222334.1 hypothetical protein BevumaM_p100 (mitochondrion)...    49   1e-09

>BAD66717.1 orf169 (mitochondrion) [Beta vulgaris subsp. vulgaris]
          Length = 169

 Score = 49.3 bits (116), Expect(2) = 4e-10
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = +2

Query: 176 PKSVGPTTTRGNHTWTNEISLSLTFWRQKPVSP 274
           PKSVGPTTTR NHT TNEI LSL F+  KPVSP
Sbjct: 61  PKSVGPTTTRDNHTRTNEIFLSL-FFCAKPVSP 92



 Score = 42.4 bits (98), Expect(2) = 4e-10
 Identities = 29/66 (43%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = +3

Query: 3   RQPTTGTSFALARLTPACLLP-----TIVNFKKDPSFHYSWNLTDLLGQSL*AGVSASFT 167
           RQPTTGT FALA L P CLLP     T+    +  S  YS             G  ASFT
Sbjct: 8   RQPTTGTCFALAPLIPTCLLPTKARVTLAGTSQTFSVCYS------------TGAPASFT 55

Query: 168 FPSQSP 185
            P Q P
Sbjct: 56  PPPQKP 61


>NP_064093.1 orf211 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           BAA99486.1 orf211 (mitochondrion) [Beta vulgaris subsp.
           vulgaris]
          Length = 211

 Score = 49.3 bits (116), Expect(2) = 1e-09
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = +2

Query: 176 PKSVGPTTTRGNHTWTNEISLSLTFWRQKPVSP 274
           PKSVGPTTTR NHT TNEI LSL F+  KPVSP
Sbjct: 61  PKSVGPTTTRDNHTRTNEIFLSL-FFCAKPVSP 92



 Score = 40.8 bits (94), Expect(2) = 1e-09
 Identities = 28/66 (42%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = +3

Query: 3   RQPTTGTSFALARLTPACLLP-----TIVNFKKDPSFHYSWNLTDLLGQSL*AGVSASFT 167
           RQPTTGT FALA L P CLLP     T+    +  S  YS             G  ASFT
Sbjct: 8   RQPTTGTCFALAPLIPTCLLPTKARVTLAGTSQTFSVCYS------------TGAPASFT 55

Query: 168 FPSQSP 185
            P + P
Sbjct: 56  PPPKKP 61


>YP_004222334.1 hypothetical protein BevumaM_p100 (mitochondrion) [Beta vulgaris
           subsp. maritima] YP_004842140.1 hypothetical protein
           BemaM_p096 (mitochondrion) [Beta macrocarpa] CBJ14065.1
           hypothetical protein (mitochondrion) [Beta vulgaris
           subsp. maritima] CBJ17556.1 hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
           CBJ20726.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBX24945.1 hypothetical
           protein (mitochondrion) [Beta macrocarpa] CBL51974.1
           hypothetical protein (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 169

 Score = 49.3 bits (116), Expect(2) = 1e-09
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = +2

Query: 176 PKSVGPTTTRGNHTWTNEISLSLTFWRQKPVSP 274
           PKSVGPTTTR NHT TNEI LSL F+  KPVSP
Sbjct: 61  PKSVGPTTTRDNHTRTNEIFLSL-FFCAKPVSP 92



 Score = 40.8 bits (94), Expect(2) = 1e-09
 Identities = 28/66 (42%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = +3

Query: 3   RQPTTGTSFALARLTPACLLP-----TIVNFKKDPSFHYSWNLTDLLGQSL*AGVSASFT 167
           RQPTTGT FALA L P CLLP     T+    +  S  YS             G  ASFT
Sbjct: 8   RQPTTGTCFALAPLIPTCLLPTKARVTLAGTSQTFSVCYS------------TGAPASFT 55

Query: 168 FPSQSP 185
            P + P
Sbjct: 56  PPPKKP 61


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