BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00029002
         (301 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KYP43777.1 DNA-directed RNA polymerase subunit beta, partial [Ca...   201   3e-64
AFS35502.1 RNA polymerase beta subunit, partial (plastid) [Fraga...   199   1e-62
KYP36767.1 DNA-directed RNA polymerase subunit beta [Cajanus cajan]   201   2e-62
KHN23995.1 DNA-directed RNA polymerase subunit beta [Glycine soja]    200   1e-61
BAU03920.1 RNA polymerase beta subunit, partial (chloroplast) [S...   194   2e-61
AKI84857.1 RNA polymerase beta subunit, partial (chloroplast) [P...   196   6e-61
BAU03919.1 RNA polymerase beta subunit, partial (chloroplast) [S...   192   1e-60
KYP36296.1 DNA-directed RNA polymerase subunit beta [Cajanus cajan]   201   1e-60
BAU03923.1 RNA polymerase beta subunit, partial (chloroplast) [S...   194   2e-60
ALG36086.1 RNA polymerase beta subunit, partial (chloroplast) [S...   194   3e-60
BAS22095.1 RNA polymerase beta subunit, partial (chloroplast) [S...   194   3e-60
AKI84859.1 RNA polymerase beta subunit, partial (chloroplast) [M...   194   3e-60
ALG36089.1 RNA polymerase beta subunit, partial (chloroplast) [S...   194   3e-60
BAU03925.1 RNA polymerase beta subunit, partial (chloroplast) [S...   194   3e-60
ALG36088.1 RNA polymerase beta subunit, partial (chloroplast) [S...   194   4e-60
BAU03931.1 RNA polymerase beta subunit, partial (chloroplast) [S...   194   4e-60
ALG36090.1 RNA polymerase beta subunit, partial (chloroplast) [S...   194   4e-60
ALG36087.1 RNA polymerase beta subunit, partial (chloroplast) [S...   194   4e-60
BAU03924.1 RNA polymerase beta subunit, partial (chloroplast) [S...   194   4e-60
YP_009027272.1 RNA polymerase beta subunit (chloroplast) [Glycyr...   207   4e-60

>KYP43777.1 DNA-directed RNA polymerase subunit beta, partial [Cajanus cajan]
          Length = 181

 Score =  201 bits (510), Expect = 3e-64
 Identities = 96/100 (96%), Positives = 98/100 (98%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAG +L+R
Sbjct: 29  AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGMLDR 88

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRI PFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE
Sbjct: 89  HYRITPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 128


>AFS35502.1 RNA polymerase beta subunit, partial (plastid) [Fragaria
           pentaphylla]
          Length = 248

 Score =  199 bits (505), Expect = 1e-62
 Identities = 94/100 (94%), Positives = 98/100 (98%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAG +L+R
Sbjct: 4   AGRHGNKGIVSKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGLLDR 63

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASKQT+NPW+FEPE
Sbjct: 64  HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPE 103


>KYP36767.1 DNA-directed RNA polymerase subunit beta [Cajanus cajan]
          Length = 325

 Score =  201 bits (511), Expect = 2e-62
 Identities = 96/100 (96%), Positives = 99/100 (99%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAG +L+R
Sbjct: 76  AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGMLDR 135

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASKQT+NPWIFEPE
Sbjct: 136 HYRIAPFDERYEQEASRKLVFSELYEASKQTANPWIFEPE 175


>KHN23995.1 DNA-directed RNA polymerase subunit beta [Glycine soja]
          Length = 374

 Score =  200 bits (509), Expect = 1e-61
 Identities = 96/100 (96%), Positives = 97/100 (97%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 125 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGMLER 184

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRI PFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE
Sbjct: 185 HYRITPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 224


>BAU03920.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           natans] BAU03927.1 RNA polymerase beta subunit, partial
           (chloroplast) [Sparganium emersum] BAU03928.1 RNA
           polymerase beta subunit, partial (chloroplast)
           [Sparganium emersum] BAU03930.1 RNA polymerase beta
           subunit, partial (chloroplast) [Sparganium fallax]
           BAU03987.1 RNA polymerase beta subunit, partial
           (chloroplast) [Sparganium subglobosum]
          Length = 204

 Score =  194 bits (493), Expect = 2e-61
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 92  AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 151

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASK+T NPW+FEPE
Sbjct: 152 HYRIAPFDERYEQEASRKLVFSELYEASKKTKNPWVFEPE 191


>AKI84857.1 RNA polymerase beta subunit, partial (chloroplast) [Pelargonium
           cotyledonis]
          Length = 303

 Score =  196 bits (499), Expect = 6e-61
 Identities = 90/100 (90%), Positives = 98/100 (98%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           +GRHGNKG+VSKIL R+DMPYLQDGRP+DMVFNPLGVPSRMNVGQIFECSLGLAGS+L+R
Sbjct: 48  SGRHGNKGVVSKILPREDMPYLQDGRPIDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDR 107

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYR+APFDERYEQEASRKLVFSELYEASKQT NPW+FEPE
Sbjct: 108 HYRVAPFDERYEQEASRKLVFSELYEASKQTGNPWVFEPE 147


>BAU03919.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           hyperboreum]
          Length = 204

 Score =  192 bits (489), Expect = 1e-60
 Identities = 91/100 (91%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 92  AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 151

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELY+ASK+T NPW+FEPE
Sbjct: 152 HYRIAPFDERYEQEASRKLVFSELYKASKKTKNPWVFEPE 191


>KYP36296.1 DNA-directed RNA polymerase subunit beta [Cajanus cajan]
          Length = 489

 Score =  201 bits (510), Expect = 1e-60
 Identities = 96/100 (96%), Positives = 98/100 (98%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAG +L+R
Sbjct: 344 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGGMLDR 403

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRI PFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE
Sbjct: 404 HYRITPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 443


>BAU03923.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           androcladum]
          Length = 268

 Score =  194 bits (493), Expect = 2e-60
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 142 AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 201

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASK+T NPW+FEPE
Sbjct: 202 HYRIAPFDERYEQEASRKLVFSELYEASKKTKNPWVFEPE 241


>ALG36086.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           angustifolium]
          Length = 284

 Score =  194 bits (493), Expect = 3e-60
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 155 AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 214

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASK+T NPW+FEPE
Sbjct: 215 HYRIAPFDERYEQEASRKLVFSELYEASKKTKNPWVFEPE 254


>BAS22095.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           acaule] BAU03922.1 RNA polymerase beta subunit, partial
           (chloroplast) [Sparganium acaule]
          Length = 284

 Score =  194 bits (493), Expect = 3e-60
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 156 AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 215

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASK+T NPW+FEPE
Sbjct: 216 HYRIAPFDERYEQEASRKLVFSELYEASKKTKNPWVFEPE 255


>AKI84859.1 RNA polymerase beta subunit, partial (chloroplast) [Monsonia
           emarginata]
          Length = 299

 Score =  194 bits (494), Expect = 3e-60
 Identities = 92/100 (92%), Positives = 96/100 (96%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKG+VSKIL RQDMPYLQDG+PVDMVFNPLGVPSRMNVGQIFECSLGLAG  L+R
Sbjct: 50  AGRHGNKGVVSKILPRQDMPYLQDGKPVDMVFNPLGVPSRMNVGQIFECSLGLAGVRLDR 109

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYR+APFDERYEQEASRKLVFSELYEASKQT NPWIFEPE
Sbjct: 110 HYRVAPFDERYEQEASRKLVFSELYEASKQTGNPWIFEPE 149


>ALG36089.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           emersum]
          Length = 291

 Score =  194 bits (493), Expect = 3e-60
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 162 AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 221

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASK+T NPW+FEPE
Sbjct: 222 HYRIAPFDERYEQEASRKLVFSELYEASKKTKNPWVFEPE 261


>BAU03925.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           angustifolium] BAU03926.1 RNA polymerase beta subunit,
           partial (chloroplast) [Sparganium angustifolium]
          Length = 291

 Score =  194 bits (493), Expect = 3e-60
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 158 AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 217

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASK+T NPW+FEPE
Sbjct: 218 HYRIAPFDERYEQEASRKLVFSELYEASKKTKNPWVFEPE 257


>ALG36088.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           angustifolium]
          Length = 293

 Score =  194 bits (493), Expect = 4e-60
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 164 AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 223

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASK+T NPW+FEPE
Sbjct: 224 HYRIAPFDERYEQEASRKLVFSELYEASKKTKNPWVFEPE 263


>BAU03931.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           fluctuans]
          Length = 293

 Score =  194 bits (493), Expect = 4e-60
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 160 AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 219

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASK+T NPW+FEPE
Sbjct: 220 HYRIAPFDERYEQEASRKLVFSELYEASKKTKNPWVFEPE 259


>ALG36090.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           japonicum] ALG36091.1 RNA polymerase beta subunit,
           partial (chloroplast) [Sparganium sp. FKSE83722]
          Length = 294

 Score =  194 bits (493), Expect = 4e-60
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 165 AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 224

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASK+T NPW+FEPE
Sbjct: 225 HYRIAPFDERYEQEASRKLVFSELYEASKKTKNPWVFEPE 264


>ALG36087.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           angustifolium]
          Length = 300

 Score =  194 bits (493), Expect = 4e-60
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 171 AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 230

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASK+T NPW+FEPE
Sbjct: 231 HYRIAPFDERYEQEASRKLVFSELYEASKKTKNPWVFEPE 270


>BAU03924.1 RNA polymerase beta subunit, partial (chloroplast) [Sparganium
           angustifolium]
          Length = 300

 Score =  194 bits (493), Expect = 4e-60
 Identities = 92/100 (92%), Positives = 95/100 (95%)
 Frame = -2

Query: 300 AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
           AGRHGNKGIVSKIL RQDMPYLQDG PVDMVFNPLGVPSRMNVGQIFECSLGLAG +L R
Sbjct: 163 AGRHGNKGIVSKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKR 222

Query: 120 HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
           HYRIAPFDERYEQEASRKLVFSELYEASK+T NPW+FEPE
Sbjct: 223 HYRIAPFDERYEQEASRKLVFSELYEASKKTKNPWVFEPE 262


>YP_009027272.1 RNA polymerase beta subunit (chloroplast) [Glycyrrhiza glabra]
            AGU00068.1 RNA polymerase beta subunit (chloroplast)
            [Glycyrrhiza glabra]
          Length = 1070

 Score =  207 bits (526), Expect = 4e-60
 Identities = 100/100 (100%), Positives = 100/100 (100%)
 Frame = -2

Query: 300  AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 121
            AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR
Sbjct: 821  AGRHGNKGIVSKILSRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSVLNR 880

Query: 120  HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 1
            HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE
Sbjct: 881  HYRIAPFDERYEQEASRKLVFSELYEASKQTSNPWIFEPE 920