BLASTX nr result
ID: Glycyrrhiza34_contig00025476
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00025476
(285 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
XP_004500093.1 PREDICTED: pentatricopeptide repeat-containing pr... 105 2e-24
XP_013459812.1 organelle transcript processing protein, putative... 98 1e-21
XP_019417956.1 PREDICTED: pentatricopeptide repeat-containing pr... 87 4e-18
XP_011651205.1 PREDICTED: pentatricopeptide repeat-containing pr... 78 1e-14
KDO81630.1 hypothetical protein CISIN_1g003746mg [Citrus sinensis] 77 1e-14
XP_008246374.2 PREDICTED: pentatricopeptide repeat-containing pr... 77 2e-14
XP_004304908.1 PREDICTED: pentatricopeptide repeat-containing pr... 77 3e-14
XP_006472234.1 PREDICTED: pentatricopeptide repeat-containing pr... 76 4e-14
ONI04226.1 hypothetical protein PRUPE_6G310100 [Prunus persica] 76 5e-14
OAY42418.1 hypothetical protein MANES_09G178500 [Manihot esculen... 75 9e-14
XP_016902068.1 PREDICTED: pentatricopeptide repeat-containing pr... 75 1e-13
KCW60575.1 hypothetical protein EUGRSUZ_H03306 [Eucalyptus grandis] 74 2e-13
XP_010024144.1 PREDICTED: pentatricopeptide repeat-containing pr... 74 2e-13
XP_006382364.1 hypothetical protein POPTR_0005s01450g, partial [... 74 3e-13
CBI39619.3 unnamed protein product, partial [Vitis vinifera] 73 4e-13
XP_007137380.1 hypothetical protein PHAVU_009G122500g [Phaseolus... 72 1e-12
BAU03644.1 hypothetical protein VIGAN_UM148600 [Vigna angularis ... 68 1e-12
XP_008370366.2 PREDICTED: pentatricopeptide repeat-containing pr... 71 3e-12
XP_015067112.1 PREDICTED: pentatricopeptide repeat-containing pr... 70 4e-12
XP_010313676.1 PREDICTED: pentatricopeptide repeat-containing pr... 70 4e-12
>XP_004500093.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Cicer arietinum]
Length = 785
Score = 105 bits (262), Expect = 2e-24
Identities = 55/71 (77%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Frame = +1
Query: 76 MLVGNVR-LTITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFST 252
MLV +VR LT+ PTINL ILET+L CQWL QF QI+SQMILTGFI DTYAASRLINF+
Sbjct: 1 MLVEHVRRLTLIPTINLSILETKLHHCQWLNQFKQILSQMILTGFITDTYAASRLINFA- 59
Query: 253 THSNLVPFHYS 285
THSN VPFHYS
Sbjct: 60 THSNFVPFHYS 70
>XP_013459812.1 organelle transcript processing protein, putative [Medicago
truncatula] KEH33843.1 organelle transcript processing
protein, putative [Medicago truncatula]
Length = 1150
Score = 97.8 bits (242), Expect = 1e-21
Identities = 52/75 (69%), Positives = 61/75 (81%), Gaps = 2/75 (2%)
Frame = +1
Query: 67 VFVMLVGNVR--LTITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLI 240
VFVML +VR T+ PTINL ILE++L RCQW+ QF QI+SQMILTG+I DTYAASRL+
Sbjct: 25 VFVMLE-HVRSLTTLKPTINLSILESKLHRCQWVNQFKQILSQMILTGYITDTYAASRLV 83
Query: 241 NFSTTHSNLVPFHYS 285
NFS THSN +PF YS
Sbjct: 84 NFS-THSNFIPFQYS 97
>XP_019417956.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Lupinus angustifolius]
Length = 794
Score = 87.4 bits (215), Expect = 4e-18
Identities = 44/67 (65%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Frame = +1
Query: 88 NVRLTITPTINLCILETQL-QRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFSTTHSN 264
N++ T+ TINL IL+T L +CQ + QFNQI+SQM+LTGFI+DT+AASRLINFS THS
Sbjct: 13 NLKSTLRQTINLSILDTHLLPQCQSINQFNQILSQMLLTGFIKDTFAASRLINFS-THST 71
Query: 265 LVPFHYS 285
+PFHYS
Sbjct: 72 FIPFHYS 78
>XP_011651205.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like isoform X1 [Cucumis sativus]
Length = 812
Score = 77.8 bits (190), Expect = 1e-14
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = +1
Query: 100 TITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFST 252
T PTINL ILE L RCQ + QFNQI+SQM+LTGFIR+TYAASRLI FST
Sbjct: 38 TFKPTINLSILEFHLNRCQHINQFNQILSQMLLTGFIRETYAASRLIKFST 88
>KDO81630.1 hypothetical protein CISIN_1g003746mg [Citrus sinensis]
Length = 798
Score = 77.4 bits (189), Expect = 1e-14
Identities = 41/63 (65%), Positives = 47/63 (74%)
Frame = +1
Query: 88 NVRLTITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFSTTHSNL 267
N + PTINL ILET LQ+CQ KQF QI+SQMILTG I DT+AASRLI FST +L
Sbjct: 19 NAKPIFKPTINLSILETHLQKCQSFKQFTQILSQMILTGLIADTFAASRLIKFST---DL 75
Query: 268 VPF 276
+PF
Sbjct: 76 LPF 78
>XP_008246374.2 PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Prunus mume]
Length = 796
Score = 77.0 bits (188), Expect = 2e-14
Identities = 38/51 (74%), Positives = 43/51 (84%)
Frame = +1
Query: 109 PTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFSTTHS 261
PTINL ILET L +CQ LKQFN I+SQMILTGFIRDTYAASR++ FS+ S
Sbjct: 25 PTINLSILETHLPKCQNLKQFNPILSQMILTGFIRDTYAASRILKFSSDSS 75
>XP_004304908.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Fragaria vesca subsp. vesca]
Length = 777
Score = 76.6 bits (187), Expect = 3e-14
Identities = 38/50 (76%), Positives = 44/50 (88%)
Frame = +1
Query: 112 TINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFSTTHS 261
TINL ILETQL +C+ LK+FNQI+SQMILTGFIRDTYAASR++ FST S
Sbjct: 7 TINLSILETQLPKCKNLKRFNQILSQMILTGFIRDTYAASRVLKFSTDSS 56
>XP_006472234.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Citrus sinensis]
Length = 798
Score = 76.3 bits (186), Expect = 4e-14
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = +1
Query: 88 NVRLTITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFSTTHSNL 267
N + PTINL ILET LQ+CQ KQF QI+SQMILTG I DT+A+SRLI FST +L
Sbjct: 19 NAKPIFKPTINLSILETHLQKCQSFKQFTQILSQMILTGLIADTFASSRLIKFST---DL 75
Query: 268 VPF 276
+PF
Sbjct: 76 LPF 78
>ONI04226.1 hypothetical protein PRUPE_6G310100 [Prunus persica]
Length = 796
Score = 75.9 bits (185), Expect = 5e-14
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = +1
Query: 112 TINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFSTTHS 261
TINL ILET L +CQ LKQFN I+SQMILTGFIRDTYAASR++ FST S
Sbjct: 26 TINLSILETHLPKCQNLKQFNPILSQMILTGFIRDTYAASRILKFSTDSS 75
>OAY42418.1 hypothetical protein MANES_09G178500 [Manihot esculenta] OAY42419.1
hypothetical protein MANES_09G178500 [Manihot esculenta]
Length = 784
Score = 75.1 bits (183), Expect = 9e-14
Identities = 38/58 (65%), Positives = 46/58 (79%)
Frame = +1
Query: 79 LVGNVRLTITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFST 252
L R T+ PT+ L ILET L +C+ LKQFNQI+SQMILTGF+RDT+AASRL+ FST
Sbjct: 3 LTKGFRPTLNPTLTLPILETFLLQCRNLKQFNQILSQMILTGFLRDTFAASRLLKFST 60
>XP_016902068.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Cucumis melo]
Length = 812
Score = 74.7 bits (182), Expect = 1e-13
Identities = 36/51 (70%), Positives = 42/51 (82%)
Frame = +1
Query: 100 TITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFST 252
T PTI+L ILE L +CQ + QFNQI+SQM+LTGFIR+TYAASRLI FST
Sbjct: 38 TFKPTIDLSILEFHLNKCQHINQFNQILSQMLLTGFIRETYAASRLIKFST 88
>KCW60575.1 hypothetical protein EUGRSUZ_H03306 [Eucalyptus grandis]
Length = 641
Score = 73.9 bits (180), Expect = 2e-13
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = +1
Query: 94 RLTITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFSTTHS 261
R + PTI L ILET L RC LKQFNQI+SQMILTG+I D YAASRL+ FST S
Sbjct: 20 RPSFAPTITLSILETHLGRCHSLKQFNQILSQMILTGYIGDAYAASRLLKFSTDSS 75
>XP_010024144.1 PREDICTED: pentatricopeptide repeat-containing protein At3g62890
[Eucalyptus grandis] XP_010024145.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g62890
[Eucalyptus grandis] XP_010024147.1 PREDICTED:
pentatricopeptide repeat-containing protein At3g62890
[Eucalyptus grandis]
Length = 797
Score = 73.9 bits (180), Expect = 2e-13
Identities = 38/56 (67%), Positives = 42/56 (75%)
Frame = +1
Query: 94 RLTITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFSTTHS 261
R + PTI L ILET L RC LKQFNQI+SQMILTG+I D YAASRL+ FST S
Sbjct: 20 RPSFAPTITLSILETHLGRCHSLKQFNQILSQMILTGYIGDAYAASRLLKFSTDSS 75
>XP_006382364.1 hypothetical protein POPTR_0005s01450g, partial [Populus
trichocarpa] ERP60161.1 hypothetical protein
POPTR_0005s01450g, partial [Populus trichocarpa]
Length = 788
Score = 73.6 bits (179), Expect = 3e-13
Identities = 34/51 (66%), Positives = 44/51 (86%)
Frame = +1
Query: 100 TITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFST 252
T+ PT+ L ILET LQ+CQ +KQFNQI+SQMIL+GF +D++AASRL+ FST
Sbjct: 14 TLKPTLTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKFST 64
>CBI39619.3 unnamed protein product, partial [Vitis vinifera]
Length = 640
Score = 73.2 bits (178), Expect = 4e-13
Identities = 37/55 (67%), Positives = 42/55 (76%)
Frame = +1
Query: 88 NVRLTITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFST 252
N + T PTI L ILET L C LKQFN+I+SQMILTGFI DT+AASRL+ FST
Sbjct: 18 NHKPTFKPTITLSILETHLHNCHNLKQFNRILSQMILTGFISDTFAASRLLKFST 72
>XP_007137380.1 hypothetical protein PHAVU_009G122500g [Phaseolus vulgaris]
ESW09374.1 hypothetical protein PHAVU_009G122500g
[Phaseolus vulgaris]
Length = 774
Score = 72.0 bits (175), Expect = 1e-12
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = +1
Query: 130 LETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFSTTHSNLVPFHYS 285
L+ LQRCQW + F QI+SQ ILTG I D YAASRLINFS + S LVPFHYS
Sbjct: 6 LDAALQRCQWARHFKQILSQTILTGLISDPYAASRLINFS-SRSALVPFHYS 56
>BAU03644.1 hypothetical protein VIGAN_UM148600 [Vigna angularis var.
angularis]
Length = 130
Score = 68.2 bits (165), Expect = 1e-12
Identities = 35/52 (67%), Positives = 39/52 (75%)
Frame = +1
Query: 130 LETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFSTTHSNLVPFHYS 285
L+ LQRCQW + F +I+SQ ILTG I D YAASRLINFS T S LVPF YS
Sbjct: 6 LDAALQRCQWPRHFREILSQTILTGLISDPYAASRLINFS-TRSALVPFDYS 56
>XP_008370366.2 PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Malus domestica]
Length = 796
Score = 70.9 bits (172), Expect = 3e-12
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = +1
Query: 109 PTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFST 252
P+INL ILET L +C+ LKQFN I+SQMILTGFI DTYAASR++ F T
Sbjct: 25 PSINLSILETHLPKCRNLKQFNPILSQMILTGFINDTYAASRILKFCT 72
>XP_015067112.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Solanum pennellii]
Length = 795
Score = 70.5 bits (171), Expect = 4e-12
Identities = 37/53 (69%), Positives = 40/53 (75%)
Frame = +1
Query: 94 RLTITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFST 252
RLT TINL ILE L RCQ K F QI+SQMI TGFIRDTYAASR++ FST
Sbjct: 19 RLTSKTTINLSILEVLLLRCQNSKHFGQILSQMISTGFIRDTYAASRILKFST 71
>XP_010313676.1 PREDICTED: pentatricopeptide repeat-containing protein
At3g62890-like [Solanum lycopersicum]
Length = 795
Score = 70.5 bits (171), Expect = 4e-12
Identities = 37/53 (69%), Positives = 40/53 (75%)
Frame = +1
Query: 94 RLTITPTINLCILETQLQRCQWLKQFNQIVSQMILTGFIRDTYAASRLINFST 252
RLT TINL ILE L RCQ K F QI+SQMI TGFIRDTYAASR++ FST
Sbjct: 19 RLTSKTTINLSILEVLLLRCQNSKHFGQILSQMISTGFIRDTYAASRILKFST 71