BLASTX nr result

ID: Glycyrrhiza34_contig00025023 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00025023
         (635 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU40274.1 hypothetical protein TSUD_60650, partial [Trifolium s...   120   1e-28
XP_013456666.1 prefoldin protein [Medicago truncatula] KEH30697....   116   1e-27
KYP44536.1 RNA polymerase II subunit 5-mediating protein isogeny...   105   2e-23
XP_019449557.1 PREDICTED: RNA polymerase II subunit 5-mediating ...   102   2e-22
KHN28114.1 RNA polymerase II subunit 5-mediating protein like [G...   100   2e-21
XP_003540925.1 PREDICTED: RNA polymerase II subunit 5-mediating ...   100   2e-21
XP_015953729.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    99   8e-21
XP_016191772.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    97   4e-20
XP_017432563.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    88   7e-17
XP_014493020.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    87   1e-16
KOM50230.1 hypothetical protein LR48_Vigan08g105700 [Vigna angul...    75   2e-16
XP_004505564.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    82   5e-15
XP_007132672.1 hypothetical protein PHAVU_011G114900g [Phaseolus...    78   4e-14
XP_018831921.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    70   1e-10
XP_018831917.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    70   2e-10
XP_018831902.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    66   4e-09
XP_018831907.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    65   6e-09
XP_018831894.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    65   6e-09
XP_018831883.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    65   6e-09
XP_006469883.1 PREDICTED: RNA polymerase II subunit 5-mediating ...    59   7e-07

>GAU40274.1 hypothetical protein TSUD_60650, partial [Trifolium subterraneum]
          Length = 405

 Score =  120 bits (300), Expect = 1e-28
 Identities = 67/114 (58%), Positives = 78/114 (68%)
 Frame = +2

Query: 2   NMNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQ 181
           N+NFA+LAVQSQV+ GK + + +KS+D + KPPILP+EK SQATSASK E       QHQ
Sbjct: 299 NLNFANLAVQSQVKVGKVLAKNLKSIDPSVKPPILPREKTSQATSASKTE------VQHQ 352

Query: 182 TSQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
           TSQPSFD RKAFTGSI+EHAENL                    KPVSRFK+QRK
Sbjct: 353 TSQPSFDGRKAFTGSIVEHAENL-KKASREQNSTSQVSGSQPSKPVSRFKLQRK 405


>XP_013456666.1 prefoldin protein [Medicago truncatula] KEH30697.1 prefoldin
           protein [Medicago truncatula]
          Length = 347

 Score =  116 bits (291), Expect = 1e-27
 Identities = 71/113 (62%), Positives = 78/113 (69%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NF SLAVQSQVR GK + Q VK +D + KPPILP+EK SQATSASKIE      AQHQT
Sbjct: 244 LNFESLAVQSQVR-GK-IAQNVKPIDPSVKPPILPREKTSQATSASKIE------AQHQT 295

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
           SQPSFDSRKAFTGSI+EHAE+L                    KPVSRFKMQRK
Sbjct: 296 SQPSFDSRKAFTGSIVEHAESL-PKTSREQSSNSQVSSSQPSKPVSRFKMQRK 347


>KYP44536.1 RNA polymerase II subunit 5-mediating protein isogeny [Cajanus
           cajan]
          Length = 379

 Score =  105 bits (262), Expect = 2e-23
 Identities = 58/113 (51%), Positives = 73/113 (64%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NF++LAVQS+VREG++  + V+S D  EK P+L KEK  +AT+ASK E       +HQT
Sbjct: 273 LNFSNLAVQSRVREGESFAEFVESTDPTEKIPVLSKEKAVRATTASKTE------VRHQT 326

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
            QPSFDSRKAFTGSIIEH +NL                    KPVSRFK+QR+
Sbjct: 327 PQPSFDSRKAFTGSIIEHTDNLQKASRNQSSASSQGSSSQSSKPVSRFKIQRR 379


>XP_019449557.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           [Lupinus angustifolius] OIW08361.1 hypothetical protein
           TanjilG_03037 [Lupinus angustifolius]
          Length = 375

 Score =  102 bits (255), Expect = 2e-22
 Identities = 60/113 (53%), Positives = 74/113 (65%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NFASLAVQS+V+E + V +KV+ +D  EK  + P+EKI +AT+ASK E       QHQT
Sbjct: 270 LNFASLAVQSKVQEKEKVPKKVRFIDQGEKL-VHPEEKIVKATTASKSE------VQHQT 322

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
           SQ SFDSRKAFTGSI+EHAEN+                    KPVSRF+MQRK
Sbjct: 323 SQTSFDSRKAFTGSIVEHAENIKTTPREQSSTSSQVSDSQPKKPVSRFRMQRK 375


>KHN28114.1 RNA polymerase II subunit 5-mediating protein like [Glycine soja]
          Length = 374

 Score =  100 bits (248), Expect = 2e-21
 Identities = 59/113 (52%), Positives = 72/113 (63%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NFASLAV+S+V+E +N    V+ +D +EK P   KE+  QAT+ASK E       +HQT
Sbjct: 271 LNFASLAVESRVKERENF---VEYIDPSEKIPARSKERSVQATTASKTE------VRHQT 321

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
           SQPSFDSRKAFTGSIIEHAEN+                    KPVSRFKMQR+
Sbjct: 322 SQPSFDSRKAFTGSIIEHAENIKPTTRQQSSASSQDSGSQSSKPVSRFKMQRR 374


>XP_003540925.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           [Glycine max] XP_006592441.1 PREDICTED: RNA polymerase
           II subunit 5-mediating protein homolog [Glycine max]
           KRH25619.1 hypothetical protein GLYMA_12G116000 [Glycine
           max] KRH25620.1 hypothetical protein GLYMA_12G116000
           [Glycine max] KRH25621.1 hypothetical protein
           GLYMA_12G116000 [Glycine max]
          Length = 374

 Score =  100 bits (248), Expect = 2e-21
 Identities = 59/113 (52%), Positives = 72/113 (63%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NFASLAV+S+V+E +N    V+ +D +EK P   KE+  QAT+ASK E       +HQT
Sbjct: 271 LNFASLAVESRVKERENF---VEYIDPSEKIPARSKERSVQATTASKTE------VRHQT 321

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
           SQPSFDSRKAFTGSIIEHAEN+                    KPVSRFKMQR+
Sbjct: 322 SQPSFDSRKAFTGSIIEHAENIKPTTRQQSSASSQDSGSQSSKPVSRFKMQRR 374


>XP_015953729.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           [Arachis duranensis]
          Length = 373

 Score = 98.6 bits (244), Expect = 8e-21
 Identities = 59/113 (52%), Positives = 69/113 (61%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NFASL +QS VREGKN  +KVK VD  EKP +  +EK  +A +ASK E       QHQ 
Sbjct: 268 LNFASLDLQSNVREGKNAAKKVKFVDHIEKPLVHHEEKQVKAATASKSE------VQHQP 321

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
           SQPSFDS KAFTGSI+EH EN+                    KPVSRFKMQR+
Sbjct: 322 SQPSFDSHKAFTGSIVEHTENI-KTSNGQSSTSSQVSGSQPSKPVSRFKMQRR 373


>XP_016191772.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           [Arachis ipaensis]
          Length = 369

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 59/113 (52%), Positives = 68/113 (60%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NFASL +QS VREGKN  +KVK VD  EKP I  +EK  +A +A K E       QHQ 
Sbjct: 264 LNFASLDLQSNVREGKNAAKKVKFVDHIEKPLIHHEEKQVKAATALKSE------VQHQP 317

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
           SQPSFDS KAFTGSI+EH EN+                    KPVSRFKMQR+
Sbjct: 318 SQPSFDSHKAFTGSIVEHTENI-KTSNGQSSTSSQVSGSQPSKPVSRFKMQRR 369


>XP_017432563.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           [Vigna angularis] BAT90113.1 hypothetical protein
           VIGAN_06129100 [Vigna angularis var. angularis]
          Length = 374

 Score = 87.8 bits (216), Expect = 7e-17
 Identities = 54/113 (47%), Positives = 65/113 (57%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NFASL VQS VRE + + + +  +   EK P   KEK +Q+T  SK E+       HQT
Sbjct: 271 LNFASLGVQSTVREREKLVESIYPI---EKIPFGSKEKPAQSTITSKTED------PHQT 321

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
           SQ SFDSRKAF GSIIEHAEN+                    KPVSRFKMQR+
Sbjct: 322 SQRSFDSRKAFPGSIIEHAENIERSSREQSSASSQGSGSQSSKPVSRFKMQRR 374


>XP_014493020.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           [Vigna radiata var. radiata]
          Length = 359

 Score = 87.0 bits (214), Expect = 1e-16
 Identities = 55/113 (48%), Positives = 65/113 (57%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NFASL VQS VRE + +   V+S+   EK P   KEK +Q+T  SK E        HQT
Sbjct: 256 LNFASLGVQSTVREREKL---VESIYPTEKIPFGSKEKPAQSTITSKTE------VPHQT 306

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
           +Q SFDSRKAF GSIIEHAEN+                    KPVSRFKMQR+
Sbjct: 307 AQRSFDSRKAFPGSIIEHAENIERSSREQSSASSQGSSSQSSKPVSRFKMQRR 359


>KOM50230.1 hypothetical protein LR48_Vigan08g105700 [Vigna angularis]
          Length = 382

 Score = 75.1 bits (183), Expect(2) = 2e-16
 Identities = 44/82 (53%), Positives = 54/82 (65%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NFASL VQS VRE + + + +  +   EK P   KEK +Q+T  SK E+       HQT
Sbjct: 263 LNFASLGVQSTVREREKLVESIYPI---EKIPFGSKEKPAQSTITSKTED------PHQT 313

Query: 185 SQPSFDSRKAFTGSIIEHAENL 250
           SQ SFDSRKAF GSIIEHAEN+
Sbjct: 314 SQRSFDSRKAFPGSIIEHAENI 335



 Score = 38.1 bits (87), Expect(2) = 2e-16
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 285 HRFLVLNLQNQSPDSKCREN 344
           HR LVLNLQNQ PDSKC+E+
Sbjct: 362 HRVLVLNLQNQFPDSKCKED 381


>XP_004505564.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           [Cicer arietinum]
          Length = 355

 Score = 82.4 bits (202), Expect = 5e-15
 Identities = 57/113 (50%), Positives = 63/113 (55%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NFASLAVQSQVREGKN++Q VKSVDA+ K P      ISQA SASKIE           
Sbjct: 270 LNFASLAVQSQVREGKNLSQNVKSVDASLKHP------ISQAASASKIE----------- 312

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
                    AFTGSI+EHAENL                    KPVSRFKMQR+
Sbjct: 313 ---------AFTGSIVEHAENL-QTSSREQSSTSQVSGSQSLKPVSRFKMQRR 355


>XP_007132672.1 hypothetical protein PHAVU_011G114900g [Phaseolus vulgaris]
           XP_007132673.1 hypothetical protein PHAVU_011G114900g
           [Phaseolus vulgaris] ESW04666.1 hypothetical protein
           PHAVU_011G114900g [Phaseolus vulgaris] ESW04667.1
           hypothetical protein PHAVU_011G114900g [Phaseolus
           vulgaris]
          Length = 207

 Score = 77.8 bits (190), Expect = 4e-14
 Identities = 49/112 (43%), Positives = 64/112 (57%)
 Frame = +2

Query: 5   MNFASLAVQSQVREGKNVTQKVKSVDANEKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           +NFA L VQS VRE + +   + S+  +EK P+  +++    T  SK E       +H+T
Sbjct: 108 LNFARLGVQSTVRESEKL---LGSIYPSEKIPVGSRDE----TMTSKTE------VEHET 154

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQR 340
           ++PSFDSRKAFTGSIIEHAEN+                    KPVSRFKMQR
Sbjct: 155 AKPSFDSRKAFTGSIIEHAENIERSSREQSSASSQGSGSQSSKPVSRFKMQR 206


>XP_018831921.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X6 [Juglans regia]
          Length = 461

 Score = 70.1 bits (170), Expect = 1e-10
 Identities = 48/117 (41%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
 Frame = +2

Query: 5   MNFASLAVQSQVRE---GKNVTQKVKSVDANEKPPILPKEKIS-QATSASKIEEVFPLQA 172
           +N   L VQS+ +E   GK + Q +    + EK  +LP+ K + QA S+S+ E      A
Sbjct: 351 LNCTGLTVQSRPKEMSHGKGLVQSIMKSTSLEKALVLPEVKENVQAASSSRSE------A 404

Query: 173 QHQTSQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
             Q S+P FDSRKAFTGSIIE A N+                    KPVSRFKMQR+
Sbjct: 405 PLQDSKPGFDSRKAFTGSIIERAHNIHTSSSQQAATSSQSTGSQPSKPVSRFKMQRR 461


>XP_018831917.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X5 [Juglans regia]
          Length = 462

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 48/118 (40%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
 Frame = +2

Query: 5   MNFASLAVQSQVRE----GKNVTQKVKSVDANEKPPILPKEKIS-QATSASKIEEVFPLQ 169
           +N   L VQS+ +E    GK + Q +    + EK  +LP+ K + QA S+S+ E      
Sbjct: 351 LNCTGLTVQSRPKEEMSHGKGLVQSIMKSTSLEKALVLPEVKENVQAASSSRSE------ 404

Query: 170 AQHQTSQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
           A  Q S+P FDSRKAFTGSIIE A N+                    KPVSRFKMQR+
Sbjct: 405 APLQDSKPGFDSRKAFTGSIIERAHNIHTSSSQQAATSSQSTGSQPSKPVSRFKMQRR 462


>XP_018831902.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X3 [Juglans regia]
          Length = 487

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 50/137 (36%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
 Frame = +2

Query: 5   MNFASLAVQSQVRE---GKNVTQKVKSVDANEKPPILPKEKIS-QATSASKIE------- 151
           +N   L VQS+ +E   GK + Q +    + EK  +LP+ K + QA S+S+ E       
Sbjct: 351 LNCTGLTVQSRPKEMSHGKGLVQSIMKSTSLEKALVLPEVKENVQAASSSRSEVSRNSGP 410

Query: 152 ----------EVFPLQAQH---QTSQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXX 292
                     + FP  A     Q S+P FDSRKAFTGSIIE A N+              
Sbjct: 411 TNPGIAQALGKEFPTSAPRAPLQDSKPGFDSRKAFTGSIIERAHNIHTSSSQQAATSSQS 470

Query: 293 XXXXXXKPVSRFKMQRK 343
                 KPVSRFKMQR+
Sbjct: 471 TGSQPSKPVSRFKMQRR 487


>XP_018831907.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X4 [Juglans regia]
          Length = 484

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 50/138 (36%), Positives = 65/138 (47%), Gaps = 25/138 (18%)
 Frame = +2

Query: 5   MNFASLAVQSQVRE----GKNVTQKVKSVDANEKPPILPKEKIS-QATSASKIE------ 151
           +N   L VQS+ +E    GK + Q +    + EK  +LP+ K + QA S+S+ E      
Sbjct: 347 LNCTGLTVQSRPKEEMSHGKGLVQSIMKSTSLEKALVLPEVKENVQAASSSRSEVSRNSG 406

Query: 152 -----------EVFPLQAQH---QTSQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXX 289
                      + FP  A     Q S+P FDSRKAFTGSIIE A N+             
Sbjct: 407 PTNPGIAQALGKEFPTSAPRAPLQDSKPGFDSRKAFTGSIIERAHNIHTSSSQQAATSSQ 466

Query: 290 XXXXXXXKPVSRFKMQRK 343
                  KPVSRFKMQR+
Sbjct: 467 STGSQPSKPVSRFKMQRR 484


>XP_018831894.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X2 [Juglans regia]
          Length = 487

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 50/138 (36%), Positives = 65/138 (47%), Gaps = 25/138 (18%)
 Frame = +2

Query: 5   MNFASLAVQSQVRE----GKNVTQKVKSVDANEKPPILPKEKIS-QATSASKIE------ 151
           +N   L VQS+ +E    GK + Q +    + EK  +LP+ K + QA S+S+ E      
Sbjct: 350 LNCTGLTVQSRPKEEMSHGKGLVQSIMKSTSLEKALVLPEVKENVQAASSSRSEVSRNSG 409

Query: 152 -----------EVFPLQAQH---QTSQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXX 289
                      + FP  A     Q S+P FDSRKAFTGSIIE A N+             
Sbjct: 410 PTNPGIAQALGKEFPTSAPRAPLQDSKPGFDSRKAFTGSIIERAHNIHTSSSQQAATSSQ 469

Query: 290 XXXXXXXKPVSRFKMQRK 343
                  KPVSRFKMQR+
Sbjct: 470 STGSQPSKPVSRFKMQRR 487


>XP_018831883.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X1 [Juglans regia] XP_018831888.1 PREDICTED: RNA
           polymerase II subunit 5-mediating protein homolog
           isoform X1 [Juglans regia]
          Length = 488

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 50/138 (36%), Positives = 65/138 (47%), Gaps = 25/138 (18%)
 Frame = +2

Query: 5   MNFASLAVQSQVRE----GKNVTQKVKSVDANEKPPILPKEKIS-QATSASKIE------ 151
           +N   L VQS+ +E    GK + Q +    + EK  +LP+ K + QA S+S+ E      
Sbjct: 351 LNCTGLTVQSRPKEEMSHGKGLVQSIMKSTSLEKALVLPEVKENVQAASSSRSEVSRNSG 410

Query: 152 -----------EVFPLQAQH---QTSQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXX 289
                      + FP  A     Q S+P FDSRKAFTGSIIE A N+             
Sbjct: 411 PTNPGIAQALGKEFPTSAPRAPLQDSKPGFDSRKAFTGSIIERAHNIHTSSSQQAATSSQ 470

Query: 290 XXXXXXXKPVSRFKMQRK 343
                  KPVSRFKMQR+
Sbjct: 471 STGSQPSKPVSRFKMQRR 488


>XP_006469883.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog
           isoform X2 [Citrus sinensis]
          Length = 401

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 45/113 (39%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
 Frame = +2

Query: 20  LAVQSQVREGKNVTQKVKS---VDAN--EKPPILPKEKISQATSASKIEEVFPLQAQHQT 184
           L VQ+ + + K  T+ + +   V+AN  EK  +LPKE  + AT+   I+E+       Q 
Sbjct: 295 LTVQAALEDAKPRTKSLATNVNVEANSAEKALVLPKED-NVATAPLSIQEI-----SAQA 348

Query: 185 SQPSFDSRKAFTGSIIEHAENLXXXXXXXXXXXXXXXXXXXXKPVSRFKMQRK 343
           S+P FD  KAFT SIIEH  NL                    KPVSRFKMQRK
Sbjct: 349 SKPEFDRYKAFTESIIEHNYNLQTDQQEQIRNTSKPSGSQSSKPVSRFKMQRK 401


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