BLASTX nr result

ID: Glycyrrhiza34_contig00024419 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00024419
         (769 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_003540680.1 PREDICTED: SWI/SNF complex subunit SWI3D-like [Gl...    57   2e-09
KFK30075.1 hypothetical protein AALP_AA7G213400 [Arabis alpina]        56   4e-08
XP_018468006.1 PREDICTED: SWI/SNF complex subunit SWI3D [Raphanu...    56   4e-08
XP_007131846.1 hypothetical protein PHAVU_011G046200g [Phaseolus...    58   5e-06
XP_014494034.1 PREDICTED: SWI/SNF complex subunit SWI3D [Vigna r...    57   8e-06
XP_017433246.1 PREDICTED: SWI/SNF complex subunit SWI3D [Vigna a...    57   8e-06

>XP_003540680.1 PREDICTED: SWI/SNF complex subunit SWI3D-like [Glycine max]
           KRH24487.1 hypothetical protein GLYMA_12G044200 [Glycine
           max] KRH24488.1 hypothetical protein GLYMA_12G044200
           [Glycine max]
          Length = 1016

 Score = 57.4 bits (137), Expect(3) = 2e-09
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +3

Query: 510 WEALEASIEAQFEVIRSRGSDAHVVPTHCG 599
           WE LEA+IEA+FE IRSRG++AHVVPTHCG
Sbjct: 118 WETLEAAIEAEFEAIRSRGANAHVVPTHCG 147



 Score = 30.8 bits (68), Expect(3) = 2e-09
 Identities = 17/36 (47%), Positives = 19/36 (52%)
 Frame = +2

Query: 392 SNSLSTPFKRITRDKDLPPPHTPSVHNGPLVKPLPT 499
           S S S P KR  RDK   P   P+ HNGPL +   T
Sbjct: 40  SGSSSAPSKRAARDK-ASPLFPPAPHNGPLTRARQT 74



 Score = 21.6 bits (44), Expect(3) = 2e-09
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +1

Query: 481 RQTPTNLSAS 510
           RQTP NLSAS
Sbjct: 72  RQTPNNLSAS 81


>KFK30075.1 hypothetical protein AALP_AA7G213400 [Arabis alpina]
          Length = 983

 Score = 56.2 bits (134), Expect(2) = 4e-08
 Identities = 26/33 (78%), Positives = 27/33 (81%)
 Frame = +3

Query: 501 LR*WEALEASIEAQFEVIRSRGSDAHVVPTHCG 599
           +R WEALEA IEA FE IRSR SDAHVVP HCG
Sbjct: 118 IREWEALEAKIEADFEGIRSRDSDAHVVPNHCG 150



 Score = 29.6 bits (65), Expect(2) = 4e-08
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = +2

Query: 392 SNSLSTPFKR-ITRDKDLPPPHTPSVHNGPL--VKPLPTS-PLVGGTRS 526
           SNS S  +KR +TR+K +    +  VHNGPL   +  P++ P V G  S
Sbjct: 46  SNSSSMSYKRMLTREKAMLASFSSPVHNGPLTRARQAPSNLPSVAGVES 94


>XP_018468006.1 PREDICTED: SWI/SNF complex subunit SWI3D [Raphanus sativus]
          Length = 937

 Score = 56.2 bits (134), Expect(2) = 4e-08
 Identities = 29/54 (53%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
 Frame = +3

Query: 501 LR*WEALEASIEAQFEVIRSRGSDAHVVPTHCG----ETFASVSS*TLSCFVFG 650
           +R WEALEA IE+ FE +RSRGS+ HVVP HCG    ET   V   +L  F  G
Sbjct: 114 IREWEALEAKIESDFEAVRSRGSNVHVVPNHCGWFSWETIHPVEERSLPSFFNG 167



 Score = 29.6 bits (65), Expect(2) = 4e-08
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +2

Query: 392 SNSLSTPFKR-ITRDKDLPPPHTPSVHNGPLVK 487
           SNS ST  KR +TR+K +    +  VHNGPL +
Sbjct: 42  SNSSSTSSKRMLTREKAMLASFSSPVHNGPLTR 74


>XP_007131846.1 hypothetical protein PHAVU_011G046200g [Phaseolus vulgaris]
           ESW03840.1 hypothetical protein PHAVU_011G046200g
           [Phaseolus vulgaris]
          Length = 1031

 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 39/93 (41%), Positives = 48/93 (51%), Gaps = 5/93 (5%)
 Frame = +3

Query: 336 LHPGAVPPLRSGKPTLS--TPRILCLRLSNAXXXXXXXXXXXXXXXXMAPSSNPYQPLR* 509
           LHP   PPL +G  T +  TP  +    S                   A S+   + LR 
Sbjct: 58  LHP---PPLHNGPLTRARQTPNSVAASSSAGASTPAAVKHSERTHLSAADSAALAEQLRK 114

Query: 510 ---WEALEASIEAQFEVIRSRGSDAHVVPTHCG 599
              WE LEA+IEA+FE IRSRG++AHVVPTHCG
Sbjct: 115 ESEWETLEAAIEAEFEAIRSRGANAHVVPTHCG 147


>XP_014494034.1 PREDICTED: SWI/SNF complex subunit SWI3D [Vigna radiata var.
           radiata] XP_014494035.1 PREDICTED: SWI/SNF complex
           subunit SWI3D [Vigna radiata var. radiata]
          Length = 1037

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +3

Query: 510 WEALEASIEAQFEVIRSRGSDAHVVPTHCG 599
           WE LEA+IEA+FE IRSRG++AHVVPTHCG
Sbjct: 120 WETLEAAIEAEFEAIRSRGANAHVVPTHCG 149


>XP_017433246.1 PREDICTED: SWI/SNF complex subunit SWI3D [Vigna angularis]
           KOM50887.1 hypothetical protein LR48_Vigan08g171400
           [Vigna angularis] BAT90916.1 hypothetical protein
           VIGAN_06221100 [Vigna angularis var. angularis]
          Length = 1037

 Score = 57.4 bits (137), Expect = 8e-06
 Identities = 24/30 (80%), Positives = 28/30 (93%)
 Frame = +3

Query: 510 WEALEASIEAQFEVIRSRGSDAHVVPTHCG 599
           WE LEA+IEA+FE IRSRG++AHVVPTHCG
Sbjct: 120 WETLEAAIEAEFEAIRSRGANAHVVPTHCG 149


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