BLASTX nr result

ID: Glycyrrhiza34_contig00022254 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00022254
         (656 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KHN38371.1 Chromodomain-helicase-DNA-binding protein 2 [Glycine ...    47   2e-07

>KHN38371.1 Chromodomain-helicase-DNA-binding protein 2 [Glycine soja]
          Length = 1890

 Score = 46.6 bits (109), Expect(3) = 2e-07
 Identities = 20/22 (90%), Positives = 20/22 (90%)
 Frame = -1

Query: 608  FIPEKPYRTQPGGFPSRQGFSS 543
            F  EKPYRTQPGGFPSRQGFSS
Sbjct: 1824 FASEKPYRTQPGGFPSRQGFSS 1845



 Score = 32.0 bits (71), Expect(3) = 2e-07
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = -3

Query: 399  DPSLVS*SGSEKYPYTGIYILEQG 328
            DP  V   G E+YPYTGI ILE G
Sbjct: 1867 DPFWVCFGGYEEYPYTGIRILEDG 1890



 Score = 23.9 bits (50), Expect(3) = 2e-07
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 463  TASATVYAL*YFFSTHRNK 407
            +ASA V+++ +F STH NK
Sbjct: 1845 SASAIVHSVEFFSSTHANK 1863


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