BLASTX nr result

ID: Glycyrrhiza34_contig00022032 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00022032
         (283 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU22159.1 hypothetical protein TSUD_251870 [Trifolium subterran...    82   2e-16
XP_004491250.1 PREDICTED: pentatricopeptide repeat-containing pr...    77   2e-14
XP_003617310.2 PPR containing plant-like protein [Medicago trunc...    75   6e-14
XP_019461058.1 PREDICTED: pentatricopeptide repeat-containing pr...    62   5e-09

>GAU22159.1 hypothetical protein TSUD_251870 [Trifolium subterraneum]
          Length = 350

 Score = 81.6 bits (200), Expect = 2e-16
 Identities = 42/66 (63%), Positives = 49/66 (74%), Gaps = 2/66 (3%)
 Frame = -2

Query: 255 PCSLPHAFLVDKLLFRLKQGDLSSLRNHLLHCPDPS--SLLPQLLHRCRNHPSQLNHLIH 82
           P SLP AFL+DKLLFRLKQ D SSLRNHLL     S  +L+PQLL +C N+P  L +LI 
Sbjct: 49  PSSLPDAFLIDKLLFRLKQNDFSSLRNHLLRSNSSSTLTLIPQLLQKCHNYPLLLPNLIQ 108

Query: 81  SIASTC 64
           +IASTC
Sbjct: 109 TIASTC 114


>XP_004491250.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110
           [Cicer arietinum] XP_004491251.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Cicer arietinum] XP_004491254.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Cicer arietinum] XP_012568620.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Cicer arietinum]
          Length = 707

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 39/63 (61%), Positives = 49/63 (77%)
 Frame = -2

Query: 255 PCSLPHAFLVDKLLFRLKQGDLSSLRNHLLHCPDPSSLLPQLLHRCRNHPSQLNHLIHSI 76
           P SLP AFL+DKLLFRLKQGD SS+RN+LL   + S+L+PQLLH+C   P  L +LI ++
Sbjct: 30  PPSLPDAFLIDKLLFRLKQGDFSSVRNYLLR-SNSSTLIPQLLHKCHQFPLLLPNLIQTV 88

Query: 75  AST 67
           AST
Sbjct: 89  AST 91


>XP_003617310.2 PPR containing plant-like protein [Medicago truncatula] AET00269.2
           PPR containing plant-like protein [Medicago truncatula]
          Length = 730

 Score = 75.5 bits (184), Expect = 6e-14
 Identities = 39/65 (60%), Positives = 48/65 (73%), Gaps = 2/65 (3%)
 Frame = -2

Query: 255 PCSLPHAFLVDKLLFRLKQGDLSSLRNHLLHCPD--PSSLLPQLLHRCRNHPSQLNHLIH 82
           P SLP+A L+DKLLFRLKQ D SSLR HLLH       +L+PQLL +C+N+P  L +LI 
Sbjct: 45  PSSLPNALLIDKLLFRLKQNDFSSLRTHLLHSNSTLTLTLIPQLLQKCQNYPLLLPNLIQ 104

Query: 81  SIAST 67
           +IAST
Sbjct: 105 TIAST 109


>XP_019461058.1 PREDICTED: pentatricopeptide repeat-containing protein At5g01110
           [Lupinus angustifolius] XP_019461060.1 PREDICTED:
           pentatricopeptide repeat-containing protein At5g01110
           [Lupinus angustifolius]
          Length = 733

 Score = 61.6 bits (148), Expect = 5e-09
 Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = -2

Query: 249 SLPHAFLVDKLLFRLKQGDLSSLRNHLLHC-PDPSSLLPQLLHRCRNHPSQLNHLIHSIA 73
           SL   FLV+K++F L Q + +SLRN  L   PDPSSL+ Q+LHRCR  P   +  + S++
Sbjct: 49  SLSQEFLVEKVIFALNQNNPTSLRNLFLRSTPDPSSLVLQILHRCRQDPILTHRFVQSLS 108

Query: 72  STC 64
           STC
Sbjct: 109 STC 111


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