BLASTX nr result

ID: Glycyrrhiza34_contig00020946 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00020946
         (279 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU36816.1 hypothetical protein TSUD_219190 [Trifolium subterran...    58   1e-07
GAU18772.1 hypothetical protein TSUD_80610 [Trifolium subterraneum]    57   1e-07
CDP11040.1 unnamed protein product [Coffea canephora]                  55   1e-06
XP_019255191.1 PREDICTED: uncharacterized protein LOC109233783 [...    53   6e-06

>GAU36816.1 hypothetical protein TSUD_219190 [Trifolium subterraneum]
          Length = 521

 Score = 57.8 bits (138), Expect = 1e-07
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = +2

Query: 29  VKEFVVDGSWNWHSLHRVLPPFVCTKIASTRAPDGDLDDYPIWNFSADGAFSI*SAYDTL 208
           V  +  DG W W  +  ++P  +C KIA  + P     D+P W  S DG FS+ +AY+  
Sbjct: 274 VNHYASDGLWKWDKIRSIVPNDICDKIAVIKPPSQGAPDFPCWKLSVDGYFSLKTAYE-F 332

Query: 209 LQNSTQGSSGFN--FDVVWN 262
           ++N  Q     N  F+ VW+
Sbjct: 333 MENQHQEDLYINPIFEKVWH 352


>GAU18772.1 hypothetical protein TSUD_80610 [Trifolium subterraneum]
          Length = 482

 Score = 57.4 bits (137), Expect = 1e-07
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = +2

Query: 29  VKEFVVDGSWNWHSLHRVLPPFVCTKIASTRAPDGDLDDYPIWNFSADGAFSI*SAYDTL 208
           V  +  DG W W  +  ++P  +C KIA  + P     D+P W  S DG FS+ +AY+  
Sbjct: 105 VNHYASDGLWKWDKIRSIVPNDICDKIAVIKPPSQGAPDFPCWKLSIDGYFSLKTAYE-F 163

Query: 209 LQNSTQGSSGFN--FDVVWN 262
           ++N  Q     N  F+ VW+
Sbjct: 164 MENQHQEDLYINPIFEKVWH 183


>CDP11040.1 unnamed protein product [Coffea canephora]
          Length = 522

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 28/81 (34%), Positives = 44/81 (54%)
 Frame = +2

Query: 29  VKEFVVDGSWNWHSLHRVLPPFVCTKIASTRAPDGDLDDYPIWNFSADGAFSI*SAYDTL 208
           V++FV++G WN   L   +P  + ++I +  AP G  DD  +W  +  G FSI S Y+ L
Sbjct: 196 VRDFVLNGRWNQQLLRLWVPDDIVSEIVTKVAPVGSADDRAVWALTESGDFSISSTYELL 255

Query: 209 LQNSTQGSSGFNFDVVWNSAV 271
               +Q  S F F+ VW+  +
Sbjct: 256 ---GSQTPSSFMFERVWHPVI 273


>XP_019255191.1 PREDICTED: uncharacterized protein LOC109233783 [Nicotiana
           attenuata]
          Length = 656

 Score = 52.8 bits (125), Expect = 6e-06
 Identities = 25/62 (40%), Positives = 36/62 (58%)
 Frame = +2

Query: 14  NEQVSVKEFVVDGSWNWHSLHRVLPPFVCTKIASTRAPDGDLDDYPIWNFSADGAFSI*S 193
           + +  VK+F+++G WN   L+ VLP  +   IA     D + DD+PIW  S DG FS  S
Sbjct: 595 SSKAQVKDFIINGEWNIVKLNDVLPVHIMDSIAQLDIGDPNEDDFPIWTTSNDGRFSSNS 654

Query: 194 AY 199
           A+
Sbjct: 655 AW 656


Top