BLASTX nr result

ID: Glycyrrhiza34_contig00018878 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00018878
         (253 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU24878.1 hypothetical protein TSUD_116020 [Trifolium subterran...    66   8e-11
XP_003610678.1 chromatin remodeling factor, putative [Medicago t...    63   9e-10
XP_004511345.1 PREDICTED: probable ATP-dependent DNA helicase CH...    60   2e-08
XP_003539117.1 PREDICTED: probable ATP-dependent DNA helicase CH...    55   5e-07
KHN35190.1 Transcription regulatory protein SNF2 [Glycine soja]        55   5e-07
XP_009412075.1 PREDICTED: probable ATP-dependent DNA helicase CH...    53   3e-06
XP_016202345.1 PREDICTED: probable ATP-dependent DNA helicase CH...    52   6e-06

>GAU24878.1 hypothetical protein TSUD_116020 [Trifolium subterraneum]
          Length = 1051

 Score = 66.2 bits (160), Expect = 8e-11
 Identities = 31/38 (81%), Positives = 36/38 (94%)
 Frame = -1

Query: 118 LIGALNLVSRNLPLPPELFNTVSSIYHGSDTKPLPVDS 5
           L+GALNLVSRNLPLPPELFNTVSSI +GS+ KPLP++S
Sbjct: 5   LLGALNLVSRNLPLPPELFNTVSSICYGSEPKPLPLNS 42


>XP_003610678.1 chromatin remodeling factor, putative [Medicago truncatula]
           AES93636.1 chromatin remodeling factor, putative
           [Medicago truncatula]
          Length = 1063

 Score = 63.2 bits (152), Expect = 9e-10
 Identities = 30/38 (78%), Positives = 36/38 (94%)
 Frame = -1

Query: 118 LIGALNLVSRNLPLPPELFNTVSSIYHGSDTKPLPVDS 5
           LIGALNLVSR+LPLPPELFNTVSSI +GSD+KPL +++
Sbjct: 5   LIGALNLVSRDLPLPPELFNTVSSICYGSDSKPLSLNA 42


>XP_004511345.1 PREDICTED: probable ATP-dependent DNA helicase CHR12 isoform X1
           [Cicer arietinum]
          Length = 1070

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 29/31 (93%), Positives = 30/31 (96%)
 Frame = -1

Query: 118 LIGALNLVSRNLPLPPELFNTVSSIYHGSDT 26
           LIGALNLVSRNLPLPPELFNTVSSI +GSDT
Sbjct: 5   LIGALNLVSRNLPLPPELFNTVSSICYGSDT 35


>XP_003539117.1 PREDICTED: probable ATP-dependent DNA helicase CHR12 isoform X1
           [Glycine max] KRH27613.1 hypothetical protein
           GLYMA_11G004100 [Glycine max]
          Length = 1063

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -1

Query: 118 LIGALNLVSRNLPLPPELFNTVSSIYHGSD 29
           LIGALNLVSRNLPLPP+LF+TVSSIYH S+
Sbjct: 7   LIGALNLVSRNLPLPPDLFDTVSSIYHRSN 36


>KHN35190.1 Transcription regulatory protein SNF2 [Glycine soja]
          Length = 1079

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 26/30 (86%), Positives = 29/30 (96%)
 Frame = -1

Query: 118 LIGALNLVSRNLPLPPELFNTVSSIYHGSD 29
           LIGALNLVSRNLPLPP+LF+TVSSIYH S+
Sbjct: 7   LIGALNLVSRNLPLPPDLFDTVSSIYHRSN 36


>XP_009412075.1 PREDICTED: probable ATP-dependent DNA helicase CHR12 [Musa
           acuminata subsp. malaccensis]
          Length = 1101

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 23/34 (67%), Positives = 28/34 (82%)
 Frame = -1

Query: 118 LIGALNLVSRNLPLPPELFNTVSSIYHGSDTKPL 17
           L+GALNL+SRNLPLPP++F  VSSIYHG +   L
Sbjct: 23  LVGALNLLSRNLPLPPDVFRAVSSIYHGDEPSEL 56


>XP_016202345.1 PREDICTED: probable ATP-dependent DNA helicase CHR12 isoform X1
           [Arachis ipaensis]
          Length = 1078

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = -1

Query: 118 LIGALNLVSRNLPLPPELFNTVSSIYHGSDTK 23
           L+GALN++SRNLPLPP+LFNTVSSI H S  +
Sbjct: 20  LVGALNILSRNLPLPPDLFNTVSSISHNSSAE 51


Top