BLASTX nr result

ID: Glycyrrhiza34_contig00017967 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00017967
         (260 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU11140.1 hypothetical protein TSUD_197640 [Trifolium subterran...    82   2e-16
GAU11144.1 hypothetical protein TSUD_197680 [Trifolium subterran...    79   3e-15
XP_013458277.1 mTERF protein [Medicago truncatula] KEH32308.1 mT...    74   2e-13
XP_013458276.1 mTERF protein [Medicago truncatula] KEH32307.1 mT...    74   2e-13
GAU11145.1 hypothetical protein TSUD_197690 [Trifolium subterran...    72   5e-13
AFK44987.1 unknown [Lotus japonicus]                                   66   1e-10
XP_003609653.2 mTERF protein [Medicago truncatula] AES91850.2 mT...    63   1e-09
XP_016197077.1 PREDICTED: uncharacterized protein LOC107638346 i...    61   6e-09
XP_014503896.1 PREDICTED: uncharacterized protein LOC106764175 [...    59   3e-08
XP_019417966.1 PREDICTED: uncharacterized protein LOC109328822 [...    59   3e-08
XP_007138896.1 hypothetical protein PHAVU_009G246700g [Phaseolus...    59   3e-08
XP_016197068.1 PREDICTED: uncharacterized protein LOC107638346 i...    58   7e-08
XP_016171853.1 PREDICTED: uncharacterized protein LOC107614138 [...    57   1e-07
XP_016197261.1 PREDICTED: uncharacterized protein LOC107638473 [...    57   1e-07
XP_014503837.1 PREDICTED: uncharacterized protein LOC106764123 [...    56   3e-07
XP_015938690.1 PREDICTED: uncharacterized protein LOC107464272 [...    56   3e-07
XP_007035536.2 PREDICTED: transcription termination factor MTERF...    56   3e-07
EOY06461.1 Mitochondrial transcription termination factor family...    56   3e-07
EEF35640.1 conserved hypothetical protein [Ricinus communis]           55   4e-07
XP_015933793.1 PREDICTED: uncharacterized protein LOC107459989 [...    55   5e-07

>GAU11140.1 hypothetical protein TSUD_197640 [Trifolium subterraneum]
          Length = 377

 Score = 81.6 bits (200), Expect = 2e-16
 Identities = 49/86 (56%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
 Frame = +3

Query: 3   LRALLHINAVSVSQVSPTPKCH-LLLQPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLTN 179
           LRALLH+N      +S T KCH LLLQP  H  +P S           +QQ FT+SYLTN
Sbjct: 9   LRALLHLN-----DLSQTSKCHFLLLQP--HFLNPFSTTT----TSDSNQQSFTISYLTN 57

Query: 180 TCGLSPHDALKASKRVRFRTTEKPDS 257
           TCGLSP DALK SKR+RF+T +KPDS
Sbjct: 58  TCGLSPQDALKVSKRLRFKTPKKPDS 83


>GAU11144.1 hypothetical protein TSUD_197680 [Trifolium subterraneum]
          Length = 386

 Score = 78.6 bits (192), Expect = 3e-15
 Identities = 40/82 (48%), Positives = 51/82 (62%)
 Frame = +3

Query: 12  LLHINAVSVSQVSPTPKCHLLLQPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLTNTCGL 191
           + H + +       +PKC+LL     HP   +  F+ +      DQQ FTVSYLTNTCGL
Sbjct: 1   MFHYHRIRTLFYPQSPKCYLL-----HPTHFLKPFSTITITSDSDQQSFTVSYLTNTCGL 55

Query: 192 SPHDALKASKRVRFRTTEKPDS 257
           SPH+ALKAS R+RF T +KPDS
Sbjct: 56  SPHNALKASTRLRFNTPKKPDS 77


>XP_013458277.1 mTERF protein [Medicago truncatula] KEH32308.1 mTERF protein
           [Medicago truncatula]
          Length = 373

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 45/87 (51%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = +3

Query: 3   LRALLHINAVSVSQVSPTPKCH--LLLQPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLT 176
           LR LL++N      +S TPKC   LLLQP H           L      DQ  F VSYLT
Sbjct: 8   LRTLLYLN-----NLSKTPKCCYLLLLQPHHS----------LNTTSDSDQHSFPVSYLT 52

Query: 177 NTCGLSPHDALKASKRVRFRTTEKPDS 257
           N C LSP DALKASKR+RF T +KPDS
Sbjct: 53  NNCALSPQDALKASKRLRFNTPDKPDS 79


>XP_013458276.1 mTERF protein [Medicago truncatula] KEH32307.1 mTERF protein
           [Medicago truncatula]
          Length = 420

 Score = 73.6 bits (179), Expect = 2e-13
 Identities = 45/87 (51%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = +3

Query: 3   LRALLHINAVSVSQVSPTPKCH--LLLQPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLT 176
           LR LL++N      +S TPKC   LLLQP H           L      DQ  F VSYLT
Sbjct: 8   LRTLLYLN-----NLSKTPKCCYLLLLQPHHS----------LNTTSDSDQHSFPVSYLT 52

Query: 177 NTCGLSPHDALKASKRVRFRTTEKPDS 257
           N C LSP DALKASKR+RF T +KPDS
Sbjct: 53  NNCALSPQDALKASKRLRFNTPDKPDS 79


>GAU11145.1 hypothetical protein TSUD_197690 [Trifolium subterraneum]
          Length = 386

 Score = 72.4 bits (176), Expect = 5e-13
 Identities = 37/67 (55%), Positives = 43/67 (64%)
 Frame = +3

Query: 57  PKCHLLLQPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLTNTCGLSPHDALKASKRVRFR 236
           PKC+LL     HP   +  F+ +      DQQ FTVSYLTNTCGLSP  ALKASK++ F 
Sbjct: 16  PKCYLL-----HPIHSLKPFSTITITSDSDQQSFTVSYLTNTCGLSPQKALKASKQISFN 70

Query: 237 TTEKPDS 257
           T  KPDS
Sbjct: 71  TPNKPDS 77


>AFK44987.1 unknown [Lotus japonicus]
          Length = 387

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 37/73 (50%), Positives = 42/73 (57%)
 Frame = +3

Query: 39  SQVSPTPKCHLLLQPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLTNTCGLSPHDALKAS 218
           SQ  PT KCHLLL  +  P  P+S+ +        D+Q FTVSY TN CG S   ALKAS
Sbjct: 24  SQTPPTLKCHLLLL-QLKPHHPLSIVSHNLFSTTSDKQSFTVSYFTNNCGFSHQAALKAS 82

Query: 219 KRVRFRTTEKPDS 257
            RV F    KPDS
Sbjct: 83  NRVLFDDANKPDS 95


>XP_003609653.2 mTERF protein [Medicago truncatula] AES91850.2 mTERF protein
           [Medicago truncatula]
          Length = 377

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 36/82 (43%), Positives = 46/82 (56%)
 Frame = +3

Query: 12  LLHINAVSVSQVSPTPKCHLLLQPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLTNTCGL 191
           ++H + +     SP   C+LL     HP   ++   F       DQ  FTVSYLTN  GL
Sbjct: 1   MIHCHRLRALLNSPKCCCYLL---HLHPRRSLNNLFFSTAISDSDQPSFTVSYLTNNFGL 57

Query: 192 SPHDALKASKRVRFRTTEKPDS 257
           S  DALKASKR+RF T +KPD+
Sbjct: 58  SSQDALKASKRLRFNTPDKPDT 79


>XP_016197077.1 PREDICTED: uncharacterized protein LOC107638346 isoform X2 [Arachis
           ipaensis]
          Length = 389

 Score = 60.8 bits (146), Expect = 6e-09
 Identities = 32/57 (56%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
 Frame = +3

Query: 96  PSPISLF---NFLXXXXXXDQQPFTVSYLTNTCGLSPHDALKASKRVRFRTTEKPDS 257
           PSP SLF   N+       ++Q FTV+YL N CGL P  ALKASK V F+T EKPDS
Sbjct: 28  PSPSSLFRAPNYTTVTETLEKQSFTVNYLVNNCGLLPDSALKASKYVLFKTPEKPDS 84


>XP_014503896.1 PREDICTED: uncharacterized protein LOC106764175 [Vigna radiata var.
           radiata]
          Length = 366

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 27/47 (57%), Positives = 32/47 (68%)
 Frame = +3

Query: 117 NFLXXXXXXDQQPFTVSYLTNTCGLSPHDALKASKRVRFRTTEKPDS 257
           +FL      D   FT+SYLTNTCG +P  ALK SKR+RF T +KPDS
Sbjct: 24  SFLFSTTTSDSVSFTISYLTNTCGFTPEAALKLSKRLRFNTAQKPDS 70


>XP_019417966.1 PREDICTED: uncharacterized protein LOC109328822 [Lupinus
           angustifolius] OIV95218.1 hypothetical protein
           TanjilG_21608 [Lupinus angustifolius]
          Length = 384

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 39/84 (46%), Positives = 47/84 (55%)
 Frame = +3

Query: 6   RALLHINAVSVSQVSPTPKCHLLLQPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLTNTC 185
           +ALL +N  S+   SPTPKC+  L   HH      L  +       D + FTVSYL N  
Sbjct: 8   KALLSLNLNSLP--SPTPKCNPFL---HHYSFTFPLKFYTTTS---DPKSFTVSYLINNF 59

Query: 186 GLSPHDALKASKRVRFRTTEKPDS 257
           G SP  ALKAS  VRF+T +KPDS
Sbjct: 60  GFSPESALKASNCVRFKTQKKPDS 83


>XP_007138896.1 hypothetical protein PHAVU_009G246700g [Phaseolus vulgaris]
           ESW10890.1 hypothetical protein PHAVU_009G246700g
           [Phaseolus vulgaris]
          Length = 388

 Score = 58.9 bits (141), Expect = 3e-08
 Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
 Frame = +3

Query: 12  LLHINAVSVSQVSPTPKCHLLLQPRHHPPSPISLFNFLXXXXXXDQQP-FTVSYLTNTCG 188
           LL++N+++++ +  TPK      P +  PS +    FL       QQP FTVSYL N CG
Sbjct: 11  LLYLNSLTITPLQ-TPK------PNNLFPSIL----FLKHTSNASQQPSFTVSYLVNGCG 59

Query: 189 LSPHDALKASKRVRFRTTEKPDS 257
            SP  ALKASK ++F T EKPDS
Sbjct: 60  FSPETALKASKFIQFETPEKPDS 82


>XP_016197068.1 PREDICTED: uncharacterized protein LOC107638346 isoform X1 [Arachis
           ipaensis]
          Length = 390

 Score = 57.8 bits (138), Expect = 7e-08
 Identities = 31/57 (54%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
 Frame = +3

Query: 96  PSPISLF---NFLXXXXXXDQQPFTVSYLTNTCGLSPHDALKASKRVRFRTTEKPDS 257
           PSP SLF   N+       + Q FTV+YL N CG  P  ALKASK V F+T EKPDS
Sbjct: 28  PSPSSLFRAPNYATVTETPEIQSFTVNYLVNNCGFLPDSALKASKYVLFKTPEKPDS 84


>XP_016171853.1 PREDICTED: uncharacterized protein LOC107614138 [Arachis ipaensis]
          Length = 381

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
 Frame = +3

Query: 6   RALLHINAVSVSQVSPTPKCHLLL---QPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLT 176
           RALL   + +    SP+ K +LLL   + R H  +  S           D   FT+SYLT
Sbjct: 11  RALLFFLSHNPPLPSPSTKSYLLLLRPEARRHSTTSTS----------DDHHSFTISYLT 60

Query: 177 NTCGLSPHDALKASKRVRFRTTEKPDS 257
             CG S  DAL+A+KRVRF T  KPDS
Sbjct: 61  TKCGFSHEDALRANKRVRFDTPVKPDS 87


>XP_016197261.1 PREDICTED: uncharacterized protein LOC107638473 [Arachis ipaensis]
          Length = 381

 Score = 57.0 bits (136), Expect = 1e-07
 Identities = 37/87 (42%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
 Frame = +3

Query: 6   RALLHINAVSVSQVSPTPKCHLLL---QPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLT 176
           RALL   + +    SP+ K +LLL   + R H  +  S           D   FT+SYLT
Sbjct: 11  RALLFFLSHNPPLPSPSTKSYLLLLRPEARRHSTTSTS----------DDHHSFTISYLT 60

Query: 177 NTCGLSPHDALKASKRVRFRTTEKPDS 257
             CG S  DAL+A+KRVRF T  KPDS
Sbjct: 61  TKCGFSHEDALRANKRVRFDTPVKPDS 87


>XP_014503837.1 PREDICTED: uncharacterized protein LOC106764123 [Vigna radiata var.
           radiata]
          Length = 367

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 35/79 (44%), Positives = 42/79 (53%)
 Frame = +3

Query: 21  INAVSVSQVSPTPKCHLLLQPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLTNTCGLSPH 200
           +N V   ++  +PK  LLL     P  P S           D   FT+SYLTNTCG +P 
Sbjct: 1   MNTVICHRLRLSPK--LLLYSFPKPSFPFSTTT-------SDSVSFTISYLTNTCGFTPE 51

Query: 201 DALKASKRVRFRTTEKPDS 257
            ALK SKR RF T +KPDS
Sbjct: 52  AALKLSKRHRFNTAQKPDS 70


>XP_015938690.1 PREDICTED: uncharacterized protein LOC107464272 [Arachis
           duranensis]
          Length = 381

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 38/87 (43%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
 Frame = +3

Query: 6   RALLHINAVSVSQVSPTPKCHLLL---QPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLT 176
           RALL     +    SP+ K +LLL   Q R H  +              D   FTVSYLT
Sbjct: 11  RALLFFLGHTPPLPSPSTKSYLLLLRPQARRHSTTSTP----------DDHHSFTVSYLT 60

Query: 177 NTCGLSPHDALKASKRVRFRTTEKPDS 257
             CG S  DAL+A+KRVRF T  KPDS
Sbjct: 61  TKCGFSHEDALRANKRVRFDTPVKPDS 87


>XP_007035536.2 PREDICTED: transcription termination factor MTERF6,
           chloroplastic/mitochondrial [Theobroma cacao]
           XP_007035535.2 PREDICTED: transcription termination
           factor MTERF6, chloroplastic/mitochondrial [Theobroma
           cacao]
          Length = 395

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 27/37 (72%), Positives = 28/37 (75%)
 Frame = +3

Query: 147 QQPFTVSYLTNTCGLSPHDALKASKRVRFRTTEKPDS 257
           QQ FTVSYL NTCGLSP  AL ASK V F T +KPDS
Sbjct: 47  QQSFTVSYLINTCGLSPESALHASKFVNFETPDKPDS 83


>EOY06461.1 Mitochondrial transcription termination factor family protein,
           putative isoform 1 [Theobroma cacao] EOY06462.1
           Mitochondrial transcription termination factor family
           protein, putative isoform 1 [Theobroma cacao]
          Length = 395

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 27/37 (72%), Positives = 28/37 (75%)
 Frame = +3

Query: 147 QQPFTVSYLTNTCGLSPHDALKASKRVRFRTTEKPDS 257
           QQ FTVSYL NTCGLSP  AL ASK V F T +KPDS
Sbjct: 47  QQSFTVSYLINTCGLSPESALHASKFVNFETPDKPDS 83


>EEF35640.1 conserved hypothetical protein [Ricinus communis]
          Length = 272

 Score = 55.5 bits (132), Expect = 4e-07
 Identities = 31/73 (42%), Positives = 40/73 (54%)
 Frame = +3

Query: 39  SQVSPTPKCHLLLQPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLTNTCGLSPHDALKAS 218
           ++ SPT   H +   R  P   +S    +      D+Q F V+YL N CGLSP  AL AS
Sbjct: 18  TRASPT---HAICCSRKCPSLLLSSVRCISSKASVDKQSFIVTYLINNCGLSPKSALSAS 74

Query: 219 KRVRFRTTEKPDS 257
           K +RF+T  KPDS
Sbjct: 75  KYLRFKTPHKPDS 87


>XP_015933793.1 PREDICTED: uncharacterized protein LOC107459989 [Arachis
           duranensis]
          Length = 374

 Score = 55.5 bits (132), Expect = 5e-07
 Identities = 32/69 (46%), Positives = 39/69 (56%)
 Frame = +3

Query: 51  PTPKCHLLLQPRHHPPSPISLFNFLXXXXXXDQQPFTVSYLTNTCGLSPHDALKASKRVR 230
           P+ K +LLL P+    S +    F       D   FTVSYLT  CG S  DAL+A++RVR
Sbjct: 16  PSIKSYLLLLPQTRRHSSL----FSTTSTSGDHHSFTVSYLTTKCGFSHEDALRANRRVR 71

Query: 231 FRTTEKPDS 257
           F T  KPDS
Sbjct: 72  FDTPVKPDS 80


Top