BLASTX nr result

ID: Glycyrrhiza34_contig00014724 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00014724
         (279 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

KDO63899.1 hypothetical protein CISIN_1g038960mg [Citrus sinensis]     52   2e-06
JAU70462.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulesc...    52   6e-06
JAU24964.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulesc...    52   7e-06
JAU80090.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulesc...    52   7e-06

>KDO63899.1 hypothetical protein CISIN_1g038960mg [Citrus sinensis]
          Length = 158

 Score = 52.4 bits (124), Expect = 2e-06
 Identities = 20/46 (43%), Positives = 28/46 (60%)
 Frame = -2

Query: 143 IYSYFIKSCHCGVVADIKVSNTQQNPKRLFYTCKNRACTFFKWCNP 6
           I  ++ K C CG  A IK+S T  NP ++FY C+   C FF+W +P
Sbjct: 41  IIKFYNKRCCCGYKAVIKISQTPDNPHKVFYNCRTSRCGFFRWWSP 86


>JAU70462.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulescens]
          Length = 275

 Score = 52.4 bits (124), Expect = 6e-06
 Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = -2

Query: 119 CHCGV-VADIKVSNTQQNPKRLFYTC-KNRACTFFKWCNPI 3
           CHCG     IKVSNTQ+NP R FY C   + CTFFKWC+ +
Sbjct: 36  CHCGGGFCQIKVSNTQENPGRKFYKCPAAQNCTFFKWCDKV 76


>JAU24964.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulescens]
          Length = 436

 Score = 52.4 bits (124), Expect = 7e-06
 Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = -2

Query: 119 CHCGV-VADIKVSNTQQNPKRLFYTC-KNRACTFFKWCNPI 3
           CHCG     IKVSNTQ+NP R FY C   + CTFFKWC+ +
Sbjct: 36  CHCGGGFCQIKVSNTQENPGRKFYKCPAAQNCTFFKWCDKV 76


>JAU80090.1 DNA topoisomerase 3-alpha, partial [Noccaea caerulescens]
          Length = 440

 Score = 52.4 bits (124), Expect = 7e-06
 Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = -2

Query: 119 CHCGV-VADIKVSNTQQNPKRLFYTC-KNRACTFFKWCNPI 3
           CHCG     IKVSNTQ+NP R FY C   + CTFFKWC+ +
Sbjct: 41  CHCGGGFCQIKVSNTQENPGRKFYKCPAAQNCTFFKWCDKV 81


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