BLASTX nr result
ID: Glycyrrhiza34_contig00003343
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza34_contig00003343
(211 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP68466.1 DNA-directed RNA polymerases I, II, and III subunit R... 133 1e-37
XP_004511328.1 PREDICTED: DNA-directed RNA polymerases II and IV... 132 1e-37
XP_003610652.2 DNA-directed RNA polymerase II [Medicago truncatu... 132 3e-37
AFK41303.1 unknown [Medicago truncatula] 132 3e-37
NP_001237497.1 uncharacterized protein LOC100306098 [Glycine max... 130 1e-36
NP_001238044.1 uncharacterized protein LOC100499667 [Glycine max... 130 1e-36
XP_016184160.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA ... 129 2e-36
XP_017438860.1 PREDICTED: DNA-directed RNA polymerases II and IV... 129 2e-36
XP_013688168.1 PREDICTED: DNA-directed RNA polymerases II and IV... 127 2e-36
XP_007152860.1 hypothetical protein PHAVU_004G166200g [Phaseolus... 129 3e-36
XP_004511874.1 PREDICTED: DNA-directed RNA polymerases II and IV... 128 6e-36
XP_015949518.1 PREDICTED: DNA-directed RNA polymerases II and IV... 128 9e-36
AFK38034.1 unknown [Lotus japonicus] 128 9e-36
XP_006298572.1 hypothetical protein CARUB_v10014656mg [Capsella ... 127 2e-35
XP_016165962.1 PREDICTED: DNA-directed RNA polymerases II and IV... 127 2e-35
XP_010690512.1 PREDICTED: DNA-directed RNA polymerases II and IV... 127 2e-35
NP_188871.1 Eukaryotic rpb5 RNA polymerase subunit family protei... 127 2e-35
XP_010511250.1 PREDICTED: DNA-directed RNA polymerases II and IV... 127 2e-35
XP_002885498.1 ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata] EF... 127 2e-35
XP_019578874.1 PREDICTED: DNA-directed RNA polymerases II and IV... 127 3e-35
>KYP68466.1 DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Cajanus
cajan]
Length = 206
Score = 133 bits (334), Expect = 1e-37
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = +1
Query: 1 LQTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTV 180
LQTNLTPFARTCI+E+SS+FHLEVFQEAELLVNIKEHVLVPEHQVL D EKKTLLERYTV
Sbjct: 102 LQTNLTPFARTCISEISSRFHLEVFQEAELLVNIKEHVLVPEHQVLTDAEKKTLLERYTV 161
Query: 181 KETQLPRIQV 210
KETQLPRIQV
Sbjct: 162 KETQLPRIQV 171
>XP_004511328.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Cicer arietinum]
Length = 206
Score = 132 bits (333), Expect = 1e-37
Identities = 66/69 (95%), Positives = 68/69 (98%)
Frame = +1
Query: 4 QTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTVK 183
QT+LTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVL +TEKKTLLERYTVK
Sbjct: 103 QTSLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLTETEKKTLLERYTVK 162
Query: 184 ETQLPRIQV 210
ETQLPRIQV
Sbjct: 163 ETQLPRIQV 171
>XP_003610652.2 DNA-directed RNA polymerase II [Medicago truncatula] AES93610.2
DNA-directed RNA polymerase II [Medicago truncatula]
Length = 206
Score = 132 bits (331), Expect = 3e-37
Identities = 62/69 (89%), Positives = 69/69 (100%)
Frame = +1
Query: 4 QTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTVK 183
QT+LTPFA+TC++E++SKFHLEVFQEAELLVNIKEHVLVPEHQ+LNDTEKKTLLERYTVK
Sbjct: 103 QTSLTPFAKTCVSEIASKFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVK 162
Query: 184 ETQLPRIQV 210
ETQLPRIQV
Sbjct: 163 ETQLPRIQV 171
>AFK41303.1 unknown [Medicago truncatula]
Length = 206
Score = 132 bits (331), Expect = 3e-37
Identities = 62/69 (89%), Positives = 69/69 (100%)
Frame = +1
Query: 4 QTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTVK 183
QT+LTPFA+TC++E++SKFHLEVFQEAELLVNIKEHVLVPEHQ+LNDTEKKTLLERYTVK
Sbjct: 103 QTSLTPFAKTCVSEIASKFHLEVFQEAELLVNIKEHVLVPEHQILNDTEKKTLLERYTVK 162
Query: 184 ETQLPRIQV 210
ETQLPRIQV
Sbjct: 163 ETQLPRIQV 171
>NP_001237497.1 uncharacterized protein LOC100306098 [Glycine max] ACU14117.1
unknown [Glycine max] KHN45623.1 DNA-directed RNA
polymerases I, II, and III subunit RPABC1 [Glycine soja]
KRH39324.1 hypothetical protein GLYMA_09G192900 [Glycine
max]
Length = 206
Score = 130 bits (327), Expect = 1e-36
Identities = 64/69 (92%), Positives = 66/69 (95%)
Frame = +1
Query: 4 QTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTVK 183
QTNLTPFARTCI+E+SSKFHLEVFQEAELLVNIKEH LVPEHQVL D EKKTLLERYTVK
Sbjct: 103 QTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVK 162
Query: 184 ETQLPRIQV 210
ETQLPRIQV
Sbjct: 163 ETQLPRIQV 171
>NP_001238044.1 uncharacterized protein LOC100499667 [Glycine max] ACU13177.1
unknown [Glycine max] KHN20662.1 DNA-directed RNA
polymerases I, II, and III subunit RPABC1 [Glycine soja]
KRH48354.1 hypothetical protein GLYMA_07G084000 [Glycine
max]
Length = 206
Score = 130 bits (327), Expect = 1e-36
Identities = 64/69 (92%), Positives = 66/69 (95%)
Frame = +1
Query: 4 QTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTVK 183
QTNLTPFARTCI+E+SSKFHLEVFQEAELLVNIKEH LVPEHQVL D EKKTLLERYTVK
Sbjct: 103 QTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLLERYTVK 162
Query: 184 ETQLPRIQV 210
ETQLPRIQV
Sbjct: 163 ETQLPRIQV 171
>XP_016184160.1 PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases II and
IV subunit 5A-like [Arachis ipaensis]
Length = 206
Score = 129 bits (325), Expect = 2e-36
Identities = 62/70 (88%), Positives = 67/70 (95%)
Frame = +1
Query: 1 LQTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTV 180
LQ NLTPFARTCI+EVS+KFHLEVFQEAELL+NIKEHVLVPEHQ+L D EKKTL+ERYTV
Sbjct: 102 LQQNLTPFARTCISEVSAKFHLEVFQEAELLINIKEHVLVPEHQILTDAEKKTLIERYTV 161
Query: 181 KETQLPRIQV 210
KETQLPRIQV
Sbjct: 162 KETQLPRIQV 171
>XP_017438860.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
isoform X1 [Vigna angularis] XP_017438861.1 PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A-like
isoform X2 [Vigna angularis] BAU02887.1 hypothetical
protein VIGAN_11248300 [Vigna angularis var. angularis]
Length = 206
Score = 129 bits (325), Expect = 2e-36
Identities = 63/69 (91%), Positives = 66/69 (95%)
Frame = +1
Query: 4 QTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTVK 183
QTNLTPFARTCI+E+SSKFHLEVFQEAELLVNIKEH LVPEHQVL D EKKTL+ERYTVK
Sbjct: 103 QTNLTPFARTCISEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVK 162
Query: 184 ETQLPRIQV 210
ETQLPRIQV
Sbjct: 163 ETQLPRIQV 171
>XP_013688168.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Brassica napus]
Length = 124
Score = 127 bits (318), Expect = 2e-36
Identities = 62/70 (88%), Positives = 66/70 (94%)
Frame = +1
Query: 1 LQTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTV 180
+Q NLTPFARTCI+E+SSKFHLEVFQEAE+LVNIKEHVLVPEHQVL EKKTLLERYTV
Sbjct: 20 VQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTV 79
Query: 181 KETQLPRIQV 210
KETQLPRIQV
Sbjct: 80 KETQLPRIQV 89
>XP_007152860.1 hypothetical protein PHAVU_004G166200g [Phaseolus vulgaris]
ESW24854.1 hypothetical protein PHAVU_004G166200g
[Phaseolus vulgaris]
Length = 207
Score = 129 bits (324), Expect = 3e-36
Identities = 62/69 (89%), Positives = 66/69 (95%)
Frame = +1
Query: 4 QTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTVK 183
QTNLTPFARTC++E+SSKFHLEVFQEAELLVNIKEH LVPEHQVL D EKKTL+ERYTVK
Sbjct: 104 QTNLTPFARTCVSEISSKFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVK 163
Query: 184 ETQLPRIQV 210
ETQLPRIQV
Sbjct: 164 ETQLPRIQV 172
>XP_004511874.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Cicer arietinum]
Length = 206
Score = 128 bits (322), Expect = 6e-36
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = +1
Query: 4 QTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTVK 183
QT+LTPFART +AE+SSKFHLEVFQEAELLVNIK+HVLVPEHQVL DTEKKTLLERYTVK
Sbjct: 103 QTSLTPFARTSVAEISSKFHLEVFQEAELLVNIKDHVLVPEHQVLTDTEKKTLLERYTVK 162
Query: 184 ETQLPRIQV 210
ETQLPRIQV
Sbjct: 163 ETQLPRIQV 171
>XP_015949518.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Arachis duranensis] XP_015931541.1 PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A-like
[Arachis duranensis] XP_015931542.1 PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A-like
[Arachis duranensis] XP_015931543.1 PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A-like
[Arachis duranensis] XP_015931544.1 PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A-like
[Arachis duranensis]
Length = 206
Score = 128 bits (321), Expect = 9e-36
Identities = 62/69 (89%), Positives = 65/69 (94%)
Frame = +1
Query: 4 QTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTVK 183
Q NLTPFARTCI+EVS KFHLEVFQEAELL+NIKEHVLVPEHQVL D EKKTL+ERYTVK
Sbjct: 103 QQNLTPFARTCISEVSQKFHLEVFQEAELLINIKEHVLVPEHQVLTDAEKKTLIERYTVK 162
Query: 184 ETQLPRIQV 210
ETQLPRIQV
Sbjct: 163 ETQLPRIQV 171
>AFK38034.1 unknown [Lotus japonicus]
Length = 206
Score = 128 bits (321), Expect = 9e-36
Identities = 61/69 (88%), Positives = 68/69 (98%)
Frame = +1
Query: 4 QTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTVK 183
Q+NLTPFA+TCI+E+SSKF LEVFQEAELLVNIKEHVLVPEHQ+LN+TEKKTLLERYTVK
Sbjct: 103 QSNLTPFAKTCISEMSSKFQLEVFQEAELLVNIKEHVLVPEHQILNETEKKTLLERYTVK 162
Query: 184 ETQLPRIQV 210
ETQLPRIQ+
Sbjct: 163 ETQLPRIQI 171
>XP_006298572.1 hypothetical protein CARUB_v10014656mg [Capsella rubella]
EOA31470.1 hypothetical protein CARUB_v10014656mg
[Capsella rubella]
Length = 205
Score = 127 bits (319), Expect = 2e-35
Identities = 62/70 (88%), Positives = 66/70 (94%)
Frame = +1
Query: 1 LQTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTV 180
+Q NLTPFARTCI+E+SSKFHLEVFQEAE+LVNIKEHVLVPEHQVL EKKTLLERYTV
Sbjct: 101 VQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTSEEKKTLLERYTV 160
Query: 181 KETQLPRIQV 210
KETQLPRIQV
Sbjct: 161 KETQLPRIQV 170
>XP_016165962.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A-like
[Arachis ipaensis] XP_016165963.1 PREDICTED:
DNA-directed RNA polymerases II and IV subunit 5A-like
[Arachis ipaensis]
Length = 206
Score = 127 bits (319), Expect = 2e-35
Identities = 61/69 (88%), Positives = 66/69 (95%)
Frame = +1
Query: 4 QTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTVK 183
Q NLTPFARTCI+EV++KFHLEVFQEAELL+NIKEHVLVPEHQVL D EKKTL+ERYTVK
Sbjct: 103 QQNLTPFARTCISEVAAKFHLEVFQEAELLINIKEHVLVPEHQVLTDAEKKTLIERYTVK 162
Query: 184 ETQLPRIQV 210
ETQLPRIQV
Sbjct: 163 ETQLPRIQV 171
>XP_010690512.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A [Beta
vulgaris subsp. vulgaris] KMT01516.1 hypothetical
protein BVRB_9g215190 [Beta vulgaris subsp. vulgaris]
Length = 206
Score = 127 bits (319), Expect = 2e-35
Identities = 60/70 (85%), Positives = 68/70 (97%)
Frame = +1
Query: 1 LQTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTV 180
+Q NLTPFA+TCI+E+SSKFHLEVFQEAE+LVNIKEHVLVPEHQ+LND EKKTLL+RYTV
Sbjct: 102 VQQNLTPFAKTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQLLNDEEKKTLLQRYTV 161
Query: 181 KETQLPRIQV 210
KETQLPRIQ+
Sbjct: 162 KETQLPRIQM 171
>NP_188871.1 Eukaryotic rpb5 RNA polymerase subunit family protein [Arabidopsis
thaliana] O81098.1 RecName: Full=DNA-directed RNA
polymerases II and IV subunit 5A; Short=RPB5a; AltName:
Full=DNA-directed RNA polymerase II subunit E; AltName:
Full=RNA polymerase I, II and III 24.3 kDa subunit;
Short=AtRPB24.3 AAK48978.1 RNA polymerase I, II and III
24.3 kDa subunit [Arabidopsis thaliana] AAL06554.1
AT3g22320/MCB17_5 [Arabidopsis thaliana] AAC28253.1 RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] BAB01769.1 RNA polymerase I, II and III 24.3
kDa subunit [Arabidopsis thaliana] AAM63355.1 RNA
polymerase I, II and III 24.3 kDa subunit [Arabidopsis
thaliana] AAN72141.1 RNA polymerase I, II and III 24.3
kDa subunit [Arabidopsis thaliana] AEE76621.1 Eukaryotic
rpb5 RNA polymerase subunit family protein [Arabidopsis
thaliana] OAP06120.1 RPB5A [Arabidopsis thaliana]
Length = 205
Score = 127 bits (318), Expect = 2e-35
Identities = 62/70 (88%), Positives = 66/70 (94%)
Frame = +1
Query: 1 LQTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTV 180
+Q NLTPFARTCI+E+SSKFHLEVFQEAE+LVNIKEHVLVPEHQVL EKKTLLERYTV
Sbjct: 101 VQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTV 160
Query: 181 KETQLPRIQV 210
KETQLPRIQV
Sbjct: 161 KETQLPRIQV 170
>XP_010511250.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Camelina sativa] XP_010466511.1 PREDICTED: DNA-directed
RNA polymerases II and IV subunit 5A [Camelina sativa]
XP_010488256.1 PREDICTED: DNA-directed RNA polymerases
II and IV subunit 5A [Camelina sativa]
Length = 205
Score = 127 bits (318), Expect = 2e-35
Identities = 62/70 (88%), Positives = 66/70 (94%)
Frame = +1
Query: 1 LQTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTV 180
+Q NLTPFARTCI+E+SSKFHLEVFQEAE+LVNIKEHVLVPEHQVL EKKTLLERYTV
Sbjct: 101 VQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTV 160
Query: 181 KETQLPRIQV 210
KETQLPRIQV
Sbjct: 161 KETQLPRIQV 170
>XP_002885498.1 ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata] EFH61757.1
ATRPABC24.3 [Arabidopsis lyrata subsp. lyrata]
Length = 205
Score = 127 bits (318), Expect = 2e-35
Identities = 62/70 (88%), Positives = 66/70 (94%)
Frame = +1
Query: 1 LQTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTV 180
+Q NLTPFARTCI+E+SSKFHLEVFQEAE+LVNIKEHVLVPEHQVL EKKTLLERYTV
Sbjct: 101 VQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTV 160
Query: 181 KETQLPRIQV 210
KETQLPRIQV
Sbjct: 161 KETQLPRIQV 170
>XP_019578874.1 PREDICTED: DNA-directed RNA polymerases II and IV subunit 5A
[Rhinolophus sinicus]
Length = 206
Score = 127 bits (318), Expect = 3e-35
Identities = 62/70 (88%), Positives = 66/70 (94%)
Frame = +1
Query: 1 LQTNLTPFARTCIAEVSSKFHLEVFQEAELLVNIKEHVLVPEHQVLNDTEKKTLLERYTV 180
+Q NLTPFARTCI+E+SSKFHLEVFQEAE+LVNIKEHVLVPEHQVL EKKTLLERYTV
Sbjct: 102 VQQNLTPFARTCISEISSKFHLEVFQEAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTV 161
Query: 181 KETQLPRIQV 210
KETQLPRIQV
Sbjct: 162 KETQLPRIQV 171