BLASTX nr result

ID: Glycyrrhiza34_contig00001109 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza34_contig00001109
         (559 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_064004.1 orf107b gene product (mitochondrion) [Beta vulgaris ...   166   4e-50
OIT04243.1 hypothetical protein A4A49_22702 [Nicotiana attenuata]      96   9e-23
EPS74694.1 hypothetical protein M569_00069 [Genlisea aurea]            42   5e-08
XP_002446122.1 hypothetical protein SORBIDRAFT_06g002025, partia...    56   8e-07
OIT36015.1 hypothetical protein A4A49_60289, partial [Nicotiana ...    53   1e-06
XP_002868452.1 predicted protein [Arabidopsis lyrata subsp. lyra...    53   5e-06

>NP_064004.1 orf107b gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] YP_004222369.1 hypothetical protein
           BevumaM_p136 (mitochondrion) [Beta vulgaris subsp.
           maritima] YP_004842174.1 hypothetical protein BemaM_p130
           (mitochondrion) [Beta macrocarpa] BAA99316.1 orf107b
           (mitochondrion) [Beta vulgaris subsp. vulgaris]
           CBJ14008.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBJ17584.1 hypothetical
           protein (mitochondrion) [Beta vulgaris subsp. maritima]
           CBJ20702.1 hypothetical protein (mitochondrion) [Beta
           vulgaris subsp. maritima] CBX24979.1 hypothetical
           protein (mitochondrion) [Beta macrocarpa] CBL54138.1
           hypothetical protein (mitochondrion) [Beta vulgaris
           subsp. maritima]
          Length = 107

 Score =  166 bits (420), Expect = 4e-50
 Identities = 83/91 (91%), Positives = 85/91 (93%)
 Frame = +1

Query: 4   PNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTSPLQSSIKLAFPRRYEMGVFP 183
           PNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSST PLQSSIKLAF RR EMGVFP
Sbjct: 18  PNHHTTRIDANPPRYRTCDSHRIRLAQRLLNPSRAFSSTFPLQSSIKLAFSRRSEMGVFP 77

Query: 184 SPIVCIGLASSRTKEAFWRARACRKADHYIS 276
           SPIVCIGLASSR+K  + RARACRKADHYIS
Sbjct: 78  SPIVCIGLASSRSK-LYLRARACRKADHYIS 107


>OIT04243.1 hypothetical protein A4A49_22702 [Nicotiana attenuata]
          Length = 81

 Score = 95.9 bits (237), Expect = 9e-23
 Identities = 47/67 (70%), Positives = 53/67 (79%)
 Frame = -2

Query: 303 FRCSRRSLLAYVVVGLPTRTRPPESLLGSGRSQADTYDRRRKDPHFIAPGERKFDRGLER 124
           ++    SLLAYVVV LP   RPPE LLGSGR QADTY+R R+DP+FIAP ERKFD GLE+
Sbjct: 15  YKSCSNSLLAYVVVELPALIRPPECLLGSGRRQADTYNRGREDPYFIAPEERKFDGGLEK 74

Query: 123 RGGRKGS 103
           R GRKGS
Sbjct: 75  RDGRKGS 81


>EPS74694.1 hypothetical protein M569_00069 [Genlisea aurea]
          Length = 190

 Score = 42.4 bits (98), Expect(2) = 5e-08
 Identities = 18/19 (94%), Positives = 18/19 (94%)
 Frame = -2

Query: 180 KDPHFIAPGERKFDRGLER 124
           K PHFIAPGERKFDRGLER
Sbjct: 102 KTPHFIAPGERKFDRGLER 120



 Score = 42.0 bits (97), Expect(2) = 5e-08
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = -3

Query: 245 RARQKASLVLDEAKPIHTIGEGKTP 171
           R RQ ASLV DEAKP +TIGEGKTP
Sbjct: 80  RRRQNASLVRDEAKPKYTIGEGKTP 104


>XP_002446122.1 hypothetical protein SORBIDRAFT_06g002025, partial [Sorghum
           bicolor]
          Length = 132

 Score = 55.8 bits (133), Expect = 8e-07
 Identities = 24/28 (85%), Positives = 24/28 (85%)
 Frame = +1

Query: 4   PNHHTTRIDANPPRYRTCDSHRIRLAQR 87
           PNHHTT IDANPP YRTCDSHRIRL  R
Sbjct: 21  PNHHTTCIDANPPPYRTCDSHRIRLTVR 48


>OIT36015.1 hypothetical protein A4A49_60289, partial [Nicotiana attenuata]
          Length = 89

 Score = 52.8 bits (125), Expect(2) = 1e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 155 GNASLIEDWRGEVEEKARDGFRSLCASR 72
           GNASLI+DWR +VEE+AR+GFRSLCASR
Sbjct: 10  GNASLIKDWREDVEERAREGFRSLCASR 37



 Score = 26.9 bits (58), Expect(2) = 1e-06
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -2

Query: 183 RKDPHFIAPG 154
           RKDPHFIAPG
Sbjct: 1   RKDPHFIAPG 10


>XP_002868452.1 predicted protein [Arabidopsis lyrata subsp. lyrata] EFH44711.1
           predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 96

 Score = 52.8 bits (125), Expect = 5e-06
 Identities = 29/48 (60%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
 Frame = -2

Query: 300 RCSRRSLLAYVVVGLPTRTRPPESLLGSGRSQA----DTYDRRRKDPH 169
           R     LLAYV+VGLPTRTRPPE LL     +A      YDRRRKDPH
Sbjct: 8   RVPAAGLLAYVMVGLPTRTRPPECLLFVVLDEAKPIHTIYDRRRKDPH 55


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