BLASTX nr result

ID: Glycyrrhiza29_contig00007058 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza29_contig00007058
         (202 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU50975.1 hypothetical protein TSUD_411460 [Trifolium subterran...    80   3e-16
XP_013456581.1 signal recognition particle 43 kDa protein [Medic...    64   2e-10
XP_004505675.1 PREDICTED: signal recognition particle 43 kDa pro...    60   4e-09
KYP68081.1 hypothetical protein KK1_021698 [Cajanus cajan]             59   1e-08
XP_017432208.1 PREDICTED: signal recognition particle 43 kDa pro...    52   4e-06
XP_003537753.1 PREDICTED: signal recognition particle 43 kDa pro...    51   1e-05

>GAU50975.1 hypothetical protein TSUD_411460 [Trifolium subterraneum]
          Length = 386

 Score = 80.5 bits (197), Expect = 3e-16
 Identities = 44/71 (61%), Positives = 52/71 (73%), Gaps = 5/71 (7%)
 Frame = -3

Query: 200 AVFVTKPVSHLKTK---LTPIPKHHPFNSHHSLPLRHKPTHFPAVVTASLQDQQQ--APK 36
           AVF+TKP+SH K K   LT  PKHH  + H SLP+RHKPT+FP V TA LQ+QQQ   PK
Sbjct: 3   AVFLTKPISHFKPKHHSLTLTPKHHHHHHHQSLPIRHKPTNFPTVTTA-LQNQQQQTTPK 61

Query: 35  DVVVDDESYGE 3
           D  ++DESYGE
Sbjct: 62  D--IEDESYGE 70


>XP_013456581.1 signal recognition particle 43 kDa protein [Medicago truncatula]
           KEH30612.1 signal recognition particle 43 kDa protein
           [Medicago truncatula]
          Length = 391

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 11/77 (14%)
 Frame = -3

Query: 200 AVFVTKPVSHLKTKLTPIPKHHPFNSHH------SLPLRHKPTHFPAVVTAS-----LQD 54
           A+F+TKP+SH K K +  PKH PF  HH      SL LRHKPT  P V TA+      Q+
Sbjct: 3   ALFLTKPISHFKPKHSLSPKH-PFEFHHHHHHHQSLTLRHKPTKLPTVTTATQNHQQQQE 61

Query: 53  QQQAPKDVVVDDESYGE 3
           Q+Q     + D+E YGE
Sbjct: 62  QEQTTPKTIEDEEPYGE 78


>XP_004505675.1 PREDICTED: signal recognition particle 43 kDa protein,
           chloroplastic [Cicer arietinum]
          Length = 378

 Score = 60.5 bits (145), Expect = 4e-09
 Identities = 35/68 (51%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
 Frame = -3

Query: 200 AVFVTKPVSHLKTKLTPIPKHHPFNSHH--SLPLRHKPTHFPAVVTASLQDQQQAPKDVV 27
           A+F+TKPVS  KTKL+P P ++PF SHH  S   RHK T FP  +    Q+ Q  PK+  
Sbjct: 3   ALFLTKPVSQFKTKLSPNP-NYPFLSHHHQSFSFRHKTTKFPTAL--QNQEHQTTPKE-- 57

Query: 26  VDDESYGE 3
            +DESYGE
Sbjct: 58  TEDESYGE 65


>KYP68081.1 hypothetical protein KK1_021698 [Cajanus cajan]
          Length = 375

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = -3

Query: 200 AVFVTKPVSHLKTKLTPIPKHHPFNSHHS-LPLRHKPTHFPAVVTASLQDQQQAPKDVVV 24
           A+F+TKP SHLKTK +P PKH   + H S LPLR   T       A++Q+QQQ       
Sbjct: 3   AIFLTKPASHLKTKHSPNPKHLFPSKHKSILPLRRTRTRTRTNFPAAIQNQQQQEAPKPT 62

Query: 23  DDESYGE 3
           +DESYGE
Sbjct: 63  EDESYGE 69


>XP_017432208.1 PREDICTED: signal recognition particle 43 kDa protein,
           chloroplastic-like [Vigna angularis] KOM51099.1
           hypothetical protein LR48_Vigan08g192600 [Vigna
           angularis] BAT91140.1 hypothetical protein
           VIGAN_06245100 [Vigna angularis var. angularis]
          Length = 376

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 35/70 (50%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
 Frame = -3

Query: 197 VFVTKPVSH--LKTKLTPIPKHHPFNSHHSLPLRHKPTHFPAVVTASLQDQQQ---APKD 33
           +FV KP SH   KTK +  PKH        LP+R  PT F  +VTA+LQ+QQQ   A KD
Sbjct: 4   IFVPKPASHSHFKTKFSSNPKHF-LKQQPFLPIRQNPTRF-RLVTAALQNQQQQQAASKD 61

Query: 32  VVVDDESYGE 3
              +DESYGE
Sbjct: 62  --TEDESYGE 69


>XP_003537753.1 PREDICTED: signal recognition particle 43 kDa protein,
           chloroplastic-like [Glycine max] KRH29099.1 hypothetical
           protein GLYMA_11G097200 [Glycine max]
          Length = 382

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 9/75 (12%)
 Frame = -3

Query: 200 AVFVTKPVSH--LKTKLTPIPKH----HPFNSHHSLPLRHKPTHFPAVVTASLQDQQQ-- 45
           A+F TKP SH  L TKL+P PKH    H  + H+   +RHKPT F   VTA  Q+Q Q  
Sbjct: 3   AIFATKPASHSLLLTKLSPNPKHLFPPHQQSFHN---IRHKPTRF-RPVTAVFQNQHQQD 58

Query: 44  -APKDVVVDDESYGE 3
            A      +DESYGE
Sbjct: 59  AAAASNHTEDESYGE 73


Top