BLASTX nr result
ID: Glycyrrhiza28_contig00041992
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00041992
(346 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_024579034.1 MULTISPECIES: GGDEF domain-containing protein [Br... 141 1e-36
WP_076865868.1 GGDEF-domain containing protein [Bradyrhizobium s... 138 1e-35
WP_050630095.1 GGDEF domain-containing protein [Bradyrhizobium v... 137 3e-35
WP_074128805.1 GGDEF-domain containing protein [Bradyrhizobium s... 133 6e-34
WP_028341650.1 GGDEF domain-containing protein [Bradyrhizobium e... 128 5e-32
SEC55226.1 PAS domain S-box-containing protein/diguanylate cycla... 127 8e-32
WP_038385512.1 GGDEF domain-containing protein [Bradyrhizobium e... 127 1e-31
WP_076825707.1 GGDEF-domain containing protein [Bradyrhizobium s... 125 3e-31
SDE17470.1 PAS domain S-box-containing protein/diguanylate cycla... 125 3e-31
WP_057016682.1 GGDEF domain-containing protein [Bradyrhizobium p... 125 3e-31
WP_028337710.1 GGDEF domain-containing protein [Bradyrhizobium e... 125 3e-31
OIM91848.1 GGDEF-domain containing protein [Bradyrhizobium elkanii] 125 4e-31
WP_050386414.1 GGDEF domain-containing protein [Bradyrhizobium p... 125 4e-31
WP_041482678.1 GGDEF domain-containing protein [Bradyrhizobium e... 125 4e-31
WP_050403521.1 GGDEF domain-containing protein [Bradyrhizobium e... 124 1e-30
WP_069277811.1 GGDEF domain-containing protein [Bradyrhizobium e... 122 5e-30
WP_038380707.1 GGDEF domain-containing protein [Bradyrhizobium e... 122 5e-30
WP_044537161.1 GGDEF domain-containing protein [Bradyrhizobium s... 120 2e-29
WP_044588461.1 GGDEF domain-containing protein [Bradyrhizobium s... 120 2e-29
WP_056297268.1 GGDEF domain-containing protein [Afipia sp. Root1... 108 5e-25
>WP_024579034.1 MULTISPECIES: GGDEF domain-containing protein [Bradyrhizobium]
KIU47183.1 diguanylate cyclase [Bradyrhizobium elkanii]
OCX31763.1 diguanylate cyclase [Bradyrhizobium sp.
UASWS1016]
Length = 847
Score = 141 bits (355), Expect = 1e-36
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAARRLPQGQAPTRVARRRW+EERSLRCAIRMARMGYWESHSAAATDVWISPEFA FYEF
Sbjct: 1 MAARRLPQGQAPTRVARRRWNEERSLRCAIRMARMGYWESHSAAATDVWISPEFAAFYEF 60
Query: 24 ETVDGFIP 1
ETVDGFIP
Sbjct: 61 ETVDGFIP 68
>WP_076865868.1 GGDEF-domain containing protein [Bradyrhizobium sp. SEMIA 6399]
Length = 847
Score = 138 bits (347), Expect = 1e-35
Identities = 64/68 (94%), Positives = 66/68 (97%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+LPQGQAPTR ARRRW+EERSLRCAIRMARMGYWESHSA ATDVWISPEFATFYEF
Sbjct: 1 MAARKLPQGQAPTREARRRWNEERSLRCAIRMARMGYWESHSATATDVWISPEFATFYEF 60
Query: 24 ETVDGFIP 1
ETVDGFIP
Sbjct: 61 ETVDGFIP 68
>WP_050630095.1 GGDEF domain-containing protein [Bradyrhizobium viridifuturi]
Length = 847
Score = 137 bits (345), Expect = 3e-35
Identities = 63/68 (92%), Positives = 67/68 (98%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+LPQGQAPTRVARRRW+EERSLRCAIRMARMGYWESHSA ATDVWISPEFA+FYEF
Sbjct: 1 MAARKLPQGQAPTRVARRRWNEERSLRCAIRMARMGYWESHSATATDVWISPEFASFYEF 60
Query: 24 ETVDGFIP 1
+TVDGFIP
Sbjct: 61 KTVDGFIP 68
>WP_074128805.1 GGDEF-domain containing protein [Bradyrhizobium sp. NAS96.2]
OKO74863.1 diguanylate cyclase [Bradyrhizobium sp.
NAS96.2]
Length = 847
Score = 133 bits (335), Expect = 6e-34
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+LPQGQA TRVARRRW+EERSLRCAIRMARMGYWESHSA ATDVWISPEFA+FYEF
Sbjct: 1 MAARKLPQGQALTRVARRRWNEERSLRCAIRMARMGYWESHSATATDVWISPEFASFYEF 60
Query: 24 ETVDGFIP 1
+TVDGFIP
Sbjct: 61 KTVDGFIP 68
>WP_028341650.1 GGDEF domain-containing protein [Bradyrhizobium elkanii]
Length = 846
Score = 128 bits (321), Expect = 5e-32
Identities = 59/68 (86%), Positives = 62/68 (91%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQAPTR ARRRWHEERSLRCAIR+ARMGYWES SAAATDVWISPE A FYEF
Sbjct: 1 MAARKLSQGQAPTREARRRWHEERSLRCAIRLARMGYWESQSAAATDVWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
ET DG+IP
Sbjct: 61 ETADGYIP 68
>SEC55226.1 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF)
domain-containing protein [Bradyrhizobium erythrophlei]
Length = 847
Score = 127 bits (319), Expect = 8e-32
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQAPTR ARRRWHEERSLRCAIR+ARMGYWES SAAATD WISPE A FYEF
Sbjct: 1 MAARKLSQGQAPTREARRRWHEERSLRCAIRLARMGYWESQSAAATDFWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
ETVDG++P
Sbjct: 61 ETVDGYVP 68
>WP_038385512.1 GGDEF domain-containing protein [Bradyrhizobium elkanii]
Length = 846
Score = 127 bits (318), Expect = 1e-31
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQAPTR ARRRWHEERSLRCAIR+ARMGYWES SAAATD+WISPE A FYEF
Sbjct: 1 MAARKLSQGQAPTREARRRWHEERSLRCAIRLARMGYWESQSAAATDLWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
ET DG+IP
Sbjct: 61 ETADGYIP 68
>WP_076825707.1 GGDEF-domain containing protein [Bradyrhizobium sp. UFLA 03-321]
OMI13099.1 GGDEF-domain containing protein
[Bradyrhizobium sp. UFLA 03-321]
Length = 846
Score = 125 bits (315), Expect = 3e-31
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQAPTR ARRRWHEERSLRCAIR+ARMGYWES SAAATD+WISPE A FYEF
Sbjct: 1 MAARKLSQGQAPTREARRRWHEERSLRCAIRLARMGYWESQSAAATDLWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
+T DG+IP
Sbjct: 61 DTADGYIP 68
>SDE17470.1 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF)
domain-containing protein [Bradyrhizobium sp. R5]
Length = 846
Score = 125 bits (315), Expect = 3e-31
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQAPTR ARRRWHEERSLRCAIR+ARMGYWES SAAATD+WISPE A FYEF
Sbjct: 1 MAARKLSQGQAPTREARRRWHEERSLRCAIRLARMGYWESQSAAATDLWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
+T DG+IP
Sbjct: 61 DTADGYIP 68
>WP_057016682.1 GGDEF domain-containing protein [Bradyrhizobium pachyrhizi]
KRQ09024.1 diguanylate cyclase [Bradyrhizobium
pachyrhizi]
Length = 846
Score = 125 bits (315), Expect = 3e-31
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQAPTR ARRRWHEERSLRCAIR+ARMGYWES SAAATD+WISPE A FYEF
Sbjct: 1 MAARKLSQGQAPTREARRRWHEERSLRCAIRLARMGYWESQSAAATDLWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
+T DG+IP
Sbjct: 61 DTADGYIP 68
>WP_028337710.1 GGDEF domain-containing protein [Bradyrhizobium elkanii]
Length = 846
Score = 125 bits (315), Expect = 3e-31
Identities = 57/68 (83%), Positives = 62/68 (91%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQAPTR ARRRWHEERSLRCAIR+ARMGYWES SAAATD+WISPE A FYEF
Sbjct: 1 MAARKLSQGQAPTREARRRWHEERSLRCAIRLARMGYWESQSAAATDLWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
+T DG+IP
Sbjct: 61 DTADGYIP 68
>OIM91848.1 GGDEF-domain containing protein [Bradyrhizobium elkanii]
Length = 846
Score = 125 bits (314), Expect = 4e-31
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQ PTR ARRRWHEERSLRCAIR+ARMGYWES SAAATD+WISPE A FYEF
Sbjct: 1 MAARKLSQGQVPTREARRRWHEERSLRCAIRLARMGYWESQSAAATDLWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
ET DG+IP
Sbjct: 61 ETADGYIP 68
>WP_050386414.1 GGDEF domain-containing protein [Bradyrhizobium pachyrhizi]
Length = 846
Score = 125 bits (314), Expect = 4e-31
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQAPTR ARRRWHEERSLRCAIR+ARMGYWES SA ATD+WISPE A FYEF
Sbjct: 1 MAARKLSQGQAPTREARRRWHEERSLRCAIRLARMGYWESQSAGATDLWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
ET DG+IP
Sbjct: 61 ETADGYIP 68
>WP_041482678.1 GGDEF domain-containing protein [Bradyrhizobium elkanii]
Length = 846
Score = 125 bits (314), Expect = 4e-31
Identities = 57/68 (83%), Positives = 61/68 (89%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQ PTR ARRRWHEERSLRCAIR+ARMGYWES SAAATD+WISPE A FYEF
Sbjct: 1 MAARKLSQGQVPTREARRRWHEERSLRCAIRLARMGYWESQSAAATDLWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
ET DG+IP
Sbjct: 61 ETADGYIP 68
>WP_050403521.1 GGDEF domain-containing protein [Bradyrhizobium embrapense]
Length = 847
Score = 124 bits (310), Expect = 1e-30
Identities = 56/68 (82%), Positives = 62/68 (91%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQA TR ARRRWHEERSLRCAIR+ARMGYWES SAAATD+WISPE A FY+F
Sbjct: 1 MAARKLSQGQASTREARRRWHEERSLRCAIRLARMGYWESQSAAATDLWISPELAAFYQF 60
Query: 24 ETVDGFIP 1
ETVDG++P
Sbjct: 61 ETVDGYVP 68
>WP_069277811.1 GGDEF domain-containing protein [Bradyrhizobium elkanii] ODM77903.1
diguanylate cyclase [Bradyrhizobium elkanii] ODM84577.1
diguanylate cyclase [Bradyrhizobium elkanii]
Length = 846
Score = 122 bits (306), Expect = 5e-30
Identities = 56/68 (82%), Positives = 60/68 (88%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQ TR ARRRWHEERSLRCAIR+ARMGYWES SAAATD+WISPE A FYEF
Sbjct: 1 MAARKLSQGQVSTREARRRWHEERSLRCAIRLARMGYWESQSAAATDLWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
ET DG+IP
Sbjct: 61 ETADGYIP 68
>WP_038380707.1 GGDEF domain-containing protein [Bradyrhizobium elkanii]
Length = 846
Score = 122 bits (306), Expect = 5e-30
Identities = 56/68 (82%), Positives = 60/68 (88%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MAAR+L QGQ TR ARRRWHEERSLRCAIR+ARMGYWES SAAATD+WISPE A FYEF
Sbjct: 1 MAARKLSQGQVSTREARRRWHEERSLRCAIRLARMGYWESQSAAATDLWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
ET DG+IP
Sbjct: 61 ETADGYIP 68
>WP_044537161.1 GGDEF domain-containing protein [Bradyrhizobium sp. LTSP885]
KJC50156.1 diguanylate cyclase [Bradyrhizobium sp.
LTSP885]
Length = 720
Score = 120 bits (302), Expect = 2e-29
Identities = 58/68 (85%), Positives = 58/68 (85%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
M ARRL QGQAP VARRRWHEERSLR AIRMARMGYWES SAAATD WISPE A FYEF
Sbjct: 1 MTARRLSQGQAPMGVARRRWHEERSLRSAIRMARMGYWESQSAAATDFWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
ETVDG IP
Sbjct: 61 ETVDGLIP 68
>WP_044588461.1 GGDEF domain-containing protein [Bradyrhizobium sp. LTSPM299]
KJC59617.1 diguanylate cyclase [Bradyrhizobium sp.
LTSPM299]
Length = 724
Score = 120 bits (302), Expect = 2e-29
Identities = 58/68 (85%), Positives = 58/68 (85%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
M ARRL QGQAP VARRRWHEERSLR AIRMARMGYWES SAAATD WISPE A FYEF
Sbjct: 1 MTARRLSQGQAPMGVARRRWHEERSLRSAIRMARMGYWESQSAAATDFWISPELAAFYEF 60
Query: 24 ETVDGFIP 1
ETVDG IP
Sbjct: 61 ETVDGLIP 68
>WP_056297268.1 GGDEF domain-containing protein [Afipia sp. Root123D2] KQW20921.1
diguanylate cyclase [Afipia sp. Root123D2]
Length = 846
Score = 108 bits (269), Expect = 5e-25
Identities = 53/68 (77%), Positives = 53/68 (77%)
Frame = -2
Query: 204 MAARRLPQGQAPTRVARRRWHEERSLRCAIRMARMGYWESHSAAATDVWISPEFATFYEF 25
MA RL Q QAPTRVARRRWHEER LR AIRMARMGYWES SA ATD WISPE A FYE
Sbjct: 1 MATHRLSQRQAPTRVARRRWHEERLLRRAIRMARMGYWESDSADATDFWISPELAAFYEL 60
Query: 24 ETVDGFIP 1
ET G IP
Sbjct: 61 ETAAGLIP 68