BLASTX nr result
ID: Glycyrrhiza28_contig00041134
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00041134
(347 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_024584858.1 MULTISPECIES: DNA-binding response regulator [Bra... 139 5e-39
WP_050628460.1 DNA-binding response regulator [Bradyrhizobium vi... 132 3e-36
WP_074127559.1 DNA-binding response regulator [Bradyrhizobium sp... 128 6e-35
ERF82428.1 two-component system, OmpR family, response regulator... 128 7e-35
WP_066502770.1 DNA-binding response regulator [Bradyrhizobium sp... 126 5e-34
WP_050401215.1 DNA-binding response regulator [Bradyrhizobium em... 125 1e-33
SEE00443.1 two component transcriptional regulator, winged helix... 124 2e-33
WP_028138857.1 DNA-binding response regulator [Bradyrhizobium ja... 119 2e-31
WP_035982158.1 DNA-binding response regulator [Bradyrhizobium sp... 113 4e-29
OJY41880.1 DNA-binding response regulator [Rhizobiales bacterium... 105 4e-26
WP_011509544.1 DNA-binding response regulator [Nitrobacter hambu... 104 2e-25
WP_024582825.1 DNA-binding response regulator [Bradyrhizobium sp... 103 3e-25
WP_074271981.1 DNA-binding response regulator [Bradyrhizobium er... 102 1e-24
SHK15686.1 two component transcriptional regulator, winged helix... 102 1e-24
WP_006985537.1 DNA-binding response regulator [Cardiobacterium v... 102 1e-24
WP_027557250.1 MULTISPECIES: DNA-binding response regulator [Bra... 101 2e-24
SDO13341.1 two-component system, OmpR family, response regulator... 101 2e-24
SHH19226.1 two component transcriptional regulator, winged helix... 100 5e-24
WP_074820703.1 DNA-binding response regulator [Bradyrhizobium la... 100 5e-24
WP_024919786.1 MULTISPECIES: DNA-binding response regulator [Afi... 100 5e-24
>WP_024584858.1 MULTISPECIES: DNA-binding response regulator [Bradyrhizobium]
KIU51296.1 XRE family transcriptional regulator
[Bradyrhizobium elkanii] OCX28530.1 DNA-binding response
regulator [Bradyrhizobium sp. UASWS1016]
Length = 220
Score = 139 bits (349), Expect = 5e-39
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDG+LAVEASRSETYDIALLDLGLPVTDGL
Sbjct: 1 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGDLAVEASRSETYDIALLDLGLPVTDGL 60
Query: 37 DVLKTIRTDSTR 2
DVLKTIRTDSTR
Sbjct: 61 DVLKTIRTDSTR 72
>WP_050628460.1 DNA-binding response regulator [Bradyrhizobium viridifuturi]
Length = 220
Score = 132 bits (331), Expect = 3e-36
Identities = 67/72 (93%), Positives = 69/72 (95%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELA+EASRSETYDIALLDLGLP+TDGL
Sbjct: 1 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAIEASRSETYDIALLDLGLPLTDGL 60
Query: 37 DVLKTIRTDSTR 2
DVLK IR STR
Sbjct: 61 DVLKAIRAGSTR 72
>WP_074127559.1 DNA-binding response regulator [Bradyrhizobium sp. NAS96.2]
OKO77904.1 XRE family transcriptional regulator
[Bradyrhizobium sp. NAS96.2]
Length = 220
Score = 128 bits (322), Expect = 6e-35
Identities = 65/72 (90%), Positives = 68/72 (94%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDG+LA+EASRSETYDIALLDLGLP+TDGL
Sbjct: 1 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGDLAIEASRSETYDIALLDLGLPLTDGL 60
Query: 37 DVLKTIRTDSTR 2
DVLK IR S R
Sbjct: 61 DVLKAIRAGSMR 72
>ERF82428.1 two-component system, OmpR family, response regulator
[Bradyrhizobium sp. DFCI-1]
Length = 225
Score = 128 bits (322), Expect = 7e-35
Identities = 66/77 (85%), Positives = 69/77 (89%)
Frame = -2
Query: 232 MGDETMRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLP 53
M MRVLLVEDDRMIGAAVVEA+RDAAYAVDWVRDG+LAVEASRSETYDIALLDLGLP
Sbjct: 1 MDGRAMRVLLVEDDRMIGAAVVEAVRDAAYAVDWVRDGDLAVEASRSETYDIALLDLGLP 60
Query: 52 VTDGLDVLKTIRTDSTR 2
+TDGLDVLK IR S R
Sbjct: 61 LTDGLDVLKAIRAASMR 77
>WP_066502770.1 DNA-binding response regulator [Bradyrhizobium sp. BR 10303]
KWV59048.1 XRE family transcriptional regulator
[Bradyrhizobium sp. BR 10303]
Length = 221
Score = 126 bits (316), Expect = 5e-34
Identities = 62/72 (86%), Positives = 69/72 (95%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVLLVEDDRMIGAAVVEAL+DAAYAVDWVR+G+LA+EA SETYDIALLDLGLP+TDGL
Sbjct: 1 MRVLLVEDDRMIGAAVVEALKDAAYAVDWVRNGDLAIEAVSSETYDIALLDLGLPITDGL 60
Query: 37 DVLKTIRTDSTR 2
DVLKT+R+DS R
Sbjct: 61 DVLKTVRSDSRR 72
>WP_050401215.1 DNA-binding response regulator [Bradyrhizobium embrapense]
Length = 220
Score = 125 bits (313), Expect = 1e-33
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVL+VEDDRMIGAAVVEALRDAAYAVDWVRDG+LA+EASRSETYDIALLDLGLP TDGL
Sbjct: 1 MRVLVVEDDRMIGAAVVEALRDAAYAVDWVRDGDLAIEASRSETYDIALLDLGLPSTDGL 60
Query: 37 DVLKTIRTDSTR 2
DVLK IR ++R
Sbjct: 61 DVLKAIRERASR 72
>SEE00443.1 two component transcriptional regulator, winged helix family
[Bradyrhizobium erythrophlei]
Length = 225
Score = 124 bits (312), Expect = 2e-33
Identities = 63/77 (81%), Positives = 70/77 (90%)
Frame = -2
Query: 232 MGDETMRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLP 53
M + MRVL+VEDDRMIGAAVVEALRDAAYAVDWVR+G+LA+EASRSETYDIALLDLGLP
Sbjct: 1 MDCQAMRVLVVEDDRMIGAAVVEALRDAAYAVDWVRNGDLAIEASRSETYDIALLDLGLP 60
Query: 52 VTDGLDVLKTIRTDSTR 2
+TDGLDVLK IR + R
Sbjct: 61 LTDGLDVLKAIRERALR 77
>WP_028138857.1 DNA-binding response regulator [Bradyrhizobium japonicum]
Length = 219
Score = 119 bits (298), Expect = 2e-31
Identities = 59/70 (84%), Positives = 66/70 (94%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVLLVEDDRMIGAAVVE+L+DAAYAVDWV+DGELA+EA RSETY+IALLDLGLP+ DGL
Sbjct: 1 MRVLLVEDDRMIGAAVVESLKDAAYAVDWVQDGELALEAIRSETYEIALLDLGLPLVDGL 60
Query: 37 DVLKTIRTDS 8
DVLKT+R S
Sbjct: 61 DVLKTLRASS 70
>WP_035982158.1 DNA-binding response regulator [Bradyrhizobium sp. STM 3843]
Length = 219
Score = 113 bits (283), Expect = 4e-29
Identities = 55/72 (76%), Positives = 64/72 (88%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVLL EDD+MIGAAVVEAL+DAAYAVDWVRDG LA+EA+R+E+Y + LLDLGLP DGL
Sbjct: 1 MRVLLAEDDKMIGAAVVEALKDAAYAVDWVRDGGLAIEATRNESYHLVLLDLGLPAVDGL 60
Query: 37 DVLKTIRTDSTR 2
DVLKTIR +T+
Sbjct: 61 DVLKTIRAANTK 72
>OJY41880.1 DNA-binding response regulator [Rhizobiales bacterium 64-17]
Length = 220
Score = 105 bits (263), Expect = 4e-26
Identities = 49/67 (73%), Positives = 59/67 (88%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MR+LLVEDDRMIGAAV +AL+DAAYAVDWVRDG+ A+EA+RSE YD+ LLDLGLP DG
Sbjct: 1 MRILLVEDDRMIGAAVAQALKDAAYAVDWVRDGQTAIEAARSEAYDLTLLDLGLPTPDGT 60
Query: 37 DVLKTIR 17
+VL+ +R
Sbjct: 61 EVLRELR 67
>WP_011509544.1 DNA-binding response regulator [Nitrobacter hamburgensis]
ABE61848.1 two component transcriptional regulator,
winged helix family [Nitrobacter hamburgensis X14]
Length = 220
Score = 104 bits (259), Expect = 2e-25
Identities = 47/68 (69%), Positives = 60/68 (88%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MR+LLVEDD+M+GAAV +AL+DAAYAVDWV+DG+ A+EA+R+ETYD+ LLDLGLP DG
Sbjct: 1 MRILLVEDDQMVGAAVTQALKDAAYAVDWVKDGQTAIEAARAETYDLTLLDLGLPSRDGT 60
Query: 37 DVLKTIRT 14
+VL+ RT
Sbjct: 61 EVLRAFRT 68
>WP_024582825.1 DNA-binding response regulator [Bradyrhizobium sp. OHSU_III]
Length = 220
Score = 103 bits (257), Expect = 3e-25
Identities = 48/67 (71%), Positives = 59/67 (88%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MR+LL+EDDRMIGAAV +AL+DA+YAVDWV DGE A+EA+R+ETYD+ALLDLGLP DG
Sbjct: 1 MRILLIEDDRMIGAAVTQALKDASYAVDWVTDGETAIEAARAETYDLALLDLGLPPPDGS 60
Query: 37 DVLKTIR 17
+VL+ R
Sbjct: 61 EVLRQFR 67
>WP_074271981.1 DNA-binding response regulator [Bradyrhizobium erythrophlei]
SIO04092.1 two component transcriptional regulator,
winged helix family [Bradyrhizobium erythrophlei]
Length = 220
Score = 102 bits (253), Expect = 1e-24
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVLL+EDD+M+GAAV +ALRDAAYAVDWV DGE A+ A+ +E Y++ALLDLGLPV DG
Sbjct: 1 MRVLLIEDDKMVGAAVAQALRDAAYAVDWVTDGETAIHAAENEAYEVALLDLGLPVADGR 60
Query: 37 DVLKTIR 17
+VL+ IR
Sbjct: 61 EVLRRIR 67
>SHK15686.1 two component transcriptional regulator, winged helix family
[Bradyrhizobium lablabi]
Length = 220
Score = 102 bits (253), Expect = 1e-24
Identities = 48/67 (71%), Positives = 58/67 (86%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVLLVEDDRM+GAAV +AL+DAAYAVDWV DG+ A+EA+ E+YD+ LLDLGLP TDG
Sbjct: 1 MRVLLVEDDRMVGAAVAQALKDAAYAVDWVTDGQTAIEAAEVESYDVMLLDLGLPGTDGQ 60
Query: 37 DVLKTIR 17
DVL+ +R
Sbjct: 61 DVLRRLR 67
>WP_006985537.1 DNA-binding response regulator [Cardiobacterium valvarum]
EHM53873.1 putative transcriptional regulatory protein
QseB [Cardiobacterium valvarum F0432]
Length = 222
Score = 102 bits (253), Expect = 1e-24
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MR+LL EDDRMIG AVV L+DAAYAVDWVRDG +A A+ SETYD LLDLGLP DGL
Sbjct: 1 MRILLAEDDRMIGEAVVAGLKDAAYAVDWVRDGAMATRAAASETYDCILLDLGLPKRDGL 60
Query: 37 DVLKTIRTDS 8
DVL IR DS
Sbjct: 61 DVLADIRRDS 70
>WP_027557250.1 MULTISPECIES: DNA-binding response regulator [Bradyrhizobium]
Length = 219
Score = 101 bits (252), Expect = 2e-24
Identities = 46/72 (63%), Positives = 62/72 (86%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVLL+EDDRM+GAAV +AL+DAAYAVDWVRDGE A+ A+++E+Y++ LLDLGLP DG
Sbjct: 1 MRVLLIEDDRMVGAAVEQALKDAAYAVDWVRDGETALLAAKNESYEVLLLDLGLPNVDGR 60
Query: 37 DVLKTIRTDSTR 2
D+L+ +R+D +
Sbjct: 61 DILRRLRSDGRK 72
>SDO13341.1 two-component system, OmpR family, response regulator [Afipia sp.
GAS231]
Length = 220
Score = 101 bits (252), Expect = 2e-24
Identities = 48/72 (66%), Positives = 61/72 (84%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVL+VEDDRM+GAAVV+AL+DAAYAVDWV DG A+EA+ E+YD+ALLDLGLP+ DG
Sbjct: 1 MRVLVVEDDRMVGAAVVQALKDAAYAVDWVTDGATAIEAAAIESYDVALLDLGLPLADGR 60
Query: 37 DVLKTIRTDSTR 2
+VL+ +R+ R
Sbjct: 61 EVLRHLRSKRER 72
>SHH19226.1 two component transcriptional regulator, winged helix family
[Bradyrhizobium erythrophlei]
Length = 220
Score = 100 bits (249), Expect = 5e-24
Identities = 48/72 (66%), Positives = 58/72 (80%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVLL+EDD+MIGAAV +ALRDAAYAVDWV DGE A++A +E YD+ALLDLGLP DG
Sbjct: 1 MRVLLIEDDKMIGAAVQQALRDAAYAVDWVMDGETAIQAVENEDYDVALLDLGLPAADGR 60
Query: 37 DVLKTIRTDSTR 2
+VL+ R+ R
Sbjct: 61 EVLRRFRSRGRR 72
>WP_074820703.1 DNA-binding response regulator [Bradyrhizobium lablabi] SDI83483.1
two component transcriptional regulator, winged helix
family [Bradyrhizobium ottawaense] SED16229.1 two
component transcriptional regulator, winged helix family
[Bradyrhizobium lablabi] SHL20936.1 two component
transcriptional regulator, winged helix family
[Bradyrhizobium lablabi]
Length = 220
Score = 100 bits (249), Expect = 5e-24
Identities = 49/72 (68%), Positives = 59/72 (81%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MRVL+VEDDRMIGAAVV+AL+DAAYAVDWV DG A+EA+ E+YD+ALLDLGLP+ DG
Sbjct: 1 MRVLVVEDDRMIGAAVVQALKDAAYAVDWVTDGVTAIEAAGIESYDVALLDLGLPLADGR 60
Query: 37 DVLKTIRTDSTR 2
+VL+ R R
Sbjct: 61 EVLRQFRAKRER 72
>WP_024919786.1 MULTISPECIES: DNA-binding response regulator [Afipia]
Length = 220
Score = 100 bits (249), Expect = 5e-24
Identities = 46/67 (68%), Positives = 58/67 (86%)
Frame = -2
Query: 217 MRVLLVEDDRMIGAAVVEALRDAAYAVDWVRDGELAVEASRSETYDIALLDLGLPVTDGL 38
MR+LL+EDD+MIGAAV +AL+DA+YAVDWV DGE A+EA+R+E YD+ALLDLGLP DG
Sbjct: 1 MRILLIEDDQMIGAAVTQALKDASYAVDWVTDGETAIEAARAEAYDLALLDLGLPPPDGT 60
Query: 37 DVLKTIR 17
+VL+ R
Sbjct: 61 EVLRQFR 67