BLASTX nr result
ID: Glycyrrhiza28_contig00038923
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00038923
(394 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_063769453.1 GGDEF domain-containing protein [Rhizobium tropic... 81 3e-15
KEQ52197.1 putative signal transduction protein [Sphingobium chl... 79 2e-14
WP_069064200.1 GGDEF domain-containing protein [Sphingobium sp. ... 78 3e-14
AOF94734.1 diguanylate cyclase domain protein (plasmid) [Sphingo... 78 3e-14
WP_052134231.1 bifunctional diguanylate cyclase/phosphodiesteras... 76 2e-13
ODT43330.1 diguanylate cyclase [Methylobacterium sp. SCN 67-24] 75 2e-13
WP_068074335.1 GGDEF domain-containing protein [Novosphingobium ... 75 2e-13
EQB04642.1 diguanylate cyclase [Sphingobium sp. HDIP04] 75 3e-13
WP_021316401.1 MULTISPECIES: GGDEF domain-containing protein [Sp... 75 3e-13
WP_013039030.1 GGDEF domain-containing protein [Sphingobium japo... 75 3e-13
WP_056484263.1 GGDEF domain-containing protein [Sphingomonas sp.... 74 1e-12
WP_076070750.1 diguanylate cyclase [Sphingomonas sp. W16RD] 73 2e-12
SEJ97598.1 diguanylate cyclase/phosphodiesterase [Sphingobium sp... 73 2e-12
WP_056025630.1 GGDEF domain-containing protein [Sphingomonas sp.... 73 2e-12
WP_056405979.1 GGDEF domain-containing protein [Sphingomonas sp.... 72 4e-12
SEH30962.1 diguanylate cyclase (GGDEF) domain-containing protein... 71 7e-12
WP_056528320.1 GGDEF domain-containing protein [Sphingomonas sp.... 71 1e-11
WP_076745472.1 diguanylate cyclase [Sphingomonas sp. G39] 70 1e-11
ONF95160.1 Phytochrome-like protein cph2 [Sphingomonas sp. G39] 70 1e-11
SES06056.1 diguanylate cyclase/phosphodiesterase [Sphingobium sp... 70 1e-11
>WP_063769453.1 GGDEF domain-containing protein [Rhizobium tropici] OJY74065.1
diguanylate cyclase [Rhizobium sp. 60-20]
Length = 627
Score = 80.9 bits (198), Expect = 3e-15
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = -2
Query: 393 DIARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGM 223
DIAR+LDIRV+AEGIETE QA QL MGC LGQGF FS AVDR +MTE+L + A+GM
Sbjct: 539 DIARQLDIRVVAEGIETEVQASQLWMMGCVLGQGFEFSRAVDRTAMTELLRRYAEGM 595
>KEQ52197.1 putative signal transduction protein [Sphingobium chlorophenolicum]
Length = 633
Score = 78.6 bits (192), Expect = 2e-14
Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 2/99 (2%)
Frame = -2
Query: 393 DIARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMAEF 214
DIAR+LDIRV+AEGIETE QA QL SMGC LGQGF F+ DR + +L + AQGM
Sbjct: 541 DIARRLDIRVVAEGIETEVQASQLWSMGCHLGQGFAFARPGDRVTTERLLRRHAQGMGGT 600
Query: 213 IPMF--Y*QPPGSEQIFDAVTETELARSA*LVCRRSDVG 103
+P++ Q P S +V E +LA RR+ VG
Sbjct: 601 VPLYPVSLQAPASSN--GSVPEQKLASPH----RRASVG 633
>WP_069064200.1 GGDEF domain-containing protein [Sphingobium sp. RAC03]
Length = 612
Score = 78.2 bits (191), Expect = 3e-14
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQ 229
IARKL IRV+AEGIETE+QA QL GC LGQG+LFS AVDR +MT+ML+Q AQ
Sbjct: 532 IARKLGIRVVAEGIETESQASQLSDFGCALGQGYLFSRAVDRATMTDMLMQCAQ 585
>AOF94734.1 diguanylate cyclase domain protein (plasmid) [Sphingobium sp.
RAC03]
Length = 622
Score = 78.2 bits (191), Expect = 3e-14
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQ 229
IARKL IRV+AEGIETE+QA QL GC LGQG+LFS AVDR +MT+ML+Q AQ
Sbjct: 542 IARKLGIRVVAEGIETESQASQLSDFGCALGQGYLFSRAVDRATMTDMLMQCAQ 595
>WP_052134231.1 bifunctional diguanylate cyclase/phosphodiesterase [Sphingomonas
sp. 37zxx]
Length = 613
Score = 75.9 bits (185), Expect = 2e-13
Identities = 38/62 (61%), Positives = 46/62 (74%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMAEFI 211
IA KL IRV+AEG+ETE QA QL ++GC LGQG+LFS AVDRD+ T +LL AQ M
Sbjct: 541 IAGKLGIRVVAEGVETERQAYQLAAIGCELGQGYLFSRAVDRDASTRLLLDHAQPMPTDP 600
Query: 210 PM 205
P+
Sbjct: 601 PL 602
>ODT43330.1 diguanylate cyclase [Methylobacterium sp. SCN 67-24]
Length = 629
Score = 75.5 bits (184), Expect = 2e-13
Identities = 36/64 (56%), Positives = 48/64 (75%)
Frame = -2
Query: 393 DIARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMAEF 214
DIAR+L+IRV+AEGIE E QA QL SMGC+LGQGF F+ D ++ +L + AQG+A
Sbjct: 543 DIARRLNIRVVAEGIEAEVQASQLWSMGCKLGQGFAFAHPADSETTEALLRRHAQGVAGA 602
Query: 213 IPMF 202
IP++
Sbjct: 603 IPLY 606
>WP_068074335.1 GGDEF domain-containing protein [Novosphingobium lentum]
Length = 634
Score = 75.5 bits (184), Expect = 2e-13
Identities = 37/64 (57%), Positives = 47/64 (73%)
Frame = -2
Query: 393 DIARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMAEF 214
+IAR+LDIRV+AEGIETE QA QL +MGC+LGQGF FS AV + +L + AQG+
Sbjct: 548 EIARRLDIRVVAEGIETEVQASQLWAMGCQLGQGFAFSRAVGSKDIETLLRRHAQGIPGV 607
Query: 213 IPMF 202
P+F
Sbjct: 608 TPLF 611
>EQB04642.1 diguanylate cyclase [Sphingobium sp. HDIP04]
Length = 619
Score = 75.1 bits (183), Expect = 3e-13
Identities = 37/63 (58%), Positives = 46/63 (73%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMAEFI 211
IAR+L+I VIAEGIETE QA QL SMGC LGQGF F+ A DRD+ +L + A G+A
Sbjct: 534 IARRLEIMVIAEGIETEVQASQLWSMGCMLGQGFAFARATDRDATAALLRRHAAGIAGVT 593
Query: 210 PMF 202
P++
Sbjct: 594 PLY 596
>WP_021316401.1 MULTISPECIES: GGDEF domain-containing protein [Sphingobium]
EQB33765.1 diguanylate cyclase [Sphingobium ummariense
RL-3]
Length = 627
Score = 75.1 bits (183), Expect = 3e-13
Identities = 37/63 (58%), Positives = 46/63 (73%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMAEFI 211
IAR+L+I VIAEGIETE QA QL SMGC LGQGF F+ A DRD+ +L + A G+A
Sbjct: 542 IARRLEIMVIAEGIETEVQASQLWSMGCMLGQGFAFARATDRDATAALLRRHAAGIAGVT 601
Query: 210 PMF 202
P++
Sbjct: 602 PLY 604
>WP_013039030.1 GGDEF domain-containing protein [Sphingobium japonicum] BAI95250.1
putative signal transduction protein [Sphingobium
japonicum UT26S]
Length = 629
Score = 75.1 bits (183), Expect = 3e-13
Identities = 37/63 (58%), Positives = 46/63 (73%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMAEFI 211
IAR+L+I VIAEGIETE QA QL SMGC LGQGF F+ A DRD+ +L + A G+A
Sbjct: 544 IARRLEIMVIAEGIETEVQASQLWSMGCMLGQGFAFARATDRDATAALLRRHAAGIAGVT 603
Query: 210 PMF 202
P++
Sbjct: 604 PLY 606
>WP_056484263.1 GGDEF domain-containing protein [Sphingomonas sp. Leaf208]
KQM53941.1 diguanylate cyclase [Sphingomonas sp.
Leaf208]
Length = 621
Score = 73.6 bits (179), Expect = 1e-12
Identities = 33/56 (58%), Positives = 46/56 (82%)
Frame = -2
Query: 387 ARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMA 220
A+K+ IR++AEGIETE Q EQL ++GC LGQG++FS A +RD+ T +LL+ AQG+A
Sbjct: 560 AKKMGIRIVAEGIETEEQVEQLRAIGCTLGQGYIFSPAANRDTTTALLLEHAQGIA 615
>WP_076070750.1 diguanylate cyclase [Sphingomonas sp. W16RD]
Length = 614
Score = 73.2 bits (178), Expect = 2e-12
Identities = 39/61 (63%), Positives = 44/61 (72%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMAEFI 211
IA KLDIRVIAEGIETE QA L GC LGQG+LFS AVDR + T +LL RAQ + +
Sbjct: 541 IAGKLDIRVIAEGIETEDQARLLQHAGCVLGQGYLFSRAVDRHATTALLLDRAQHSTKSV 600
Query: 210 P 208
P
Sbjct: 601 P 601
>SEJ97598.1 diguanylate cyclase/phosphodiesterase [Sphingobium sp. AP50]
Length = 625
Score = 73.2 bits (178), Expect = 2e-12
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQG 226
IA+KLDIR++AEGIETE+QA L+++GCR+GQGFL+S AV R M+++L AQG
Sbjct: 543 IAQKLDIRLLAEGIETESQARHLLTLGCRIGQGFLYSPAVSRSEMSKLLRLYAQG 597
>WP_056025630.1 GGDEF domain-containing protein [Sphingomonas sp. Leaf20]
KQM68234.1 diguanylate cyclase [Sphingomonas sp. Leaf20]
Length = 626
Score = 73.2 bits (178), Expect = 2e-12
Identities = 34/56 (60%), Positives = 46/56 (82%)
Frame = -2
Query: 387 ARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMA 220
ARK+ IR++AEGIETE Q EQL ++GC LGQG++FS AV+R++ T +LL AQG+A
Sbjct: 560 ARKMGIRIVAEGIETEEQVEQLRAIGCALGQGYIFSPAVNRETTTALLLGHAQGIA 615
>WP_056405979.1 GGDEF domain-containing protein [Sphingomonas sp. Leaf226]
KQM96360.1 diguanylate cyclase [Sphingomonas sp.
Leaf226]
Length = 626
Score = 72.0 bits (175), Expect = 4e-12
Identities = 33/55 (60%), Positives = 45/55 (81%)
Frame = -2
Query: 387 ARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGM 223
A+K+ IR++AEGIETE Q EQL ++GC LGQG++FS AV+RD+ T +LL AQG+
Sbjct: 560 AKKMGIRIVAEGIETEEQVEQLRAIGCTLGQGYIFSPAVNRDTTTALLLGHAQGI 614
>SEH30962.1 diguanylate cyclase (GGDEF) domain-containing protein [Rhizobium
sp. NFR12]
Length = 602
Score = 71.2 bits (173), Expect = 7e-12
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQ 229
IA L +RV+AEGIETE Q EQLVS GC+LGQG+LFS AVDRD+ T ++ Q
Sbjct: 538 IANNLGLRVVAEGIETETQLEQLVSFGCKLGQGYLFSKAVDRDAATVLMASYGQ 591
>WP_056528320.1 GGDEF domain-containing protein [Sphingomonas sp. Leaf339]
KQU55841.1 diguanylate cyclase [Sphingomonas sp.
Leaf339]
Length = 630
Score = 70.9 bits (172), Expect = 1e-11
Identities = 31/57 (54%), Positives = 48/57 (84%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMA 220
IARK+DIR++AEGIE+E Q EQL+++GC LGQGF+F+ AV +++ T++L+ + Q +A
Sbjct: 560 IARKMDIRIVAEGIESEEQVEQLLAIGCVLGQGFVFAPAVPQEAATKLLMSKGQPVA 616
>WP_076745472.1 diguanylate cyclase [Sphingomonas sp. G39]
Length = 601
Score = 70.5 bits (171), Expect = 1e-11
Identities = 34/58 (58%), Positives = 46/58 (79%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMAE 217
IA KLDIRV+ EGIETE QA+ L ++GC+LGQG+LFS +DR + T +L++RAQ + E
Sbjct: 530 IADKLDIRVVTEGIETEQQADCLRALGCQLGQGYLFSRPLDRHATTALLMKRAQYVGE 587
>ONF95160.1 Phytochrome-like protein cph2 [Sphingomonas sp. G39]
Length = 617
Score = 70.5 bits (171), Expect = 1e-11
Identities = 34/58 (58%), Positives = 46/58 (79%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQGMAE 217
IA KLDIRV+ EGIETE QA+ L ++GC+LGQG+LFS +DR + T +L++RAQ + E
Sbjct: 546 IADKLDIRVVTEGIETEQQADCLRALGCQLGQGYLFSRPLDRHATTALLMKRAQYVGE 603
>SES06056.1 diguanylate cyclase/phosphodiesterase [Sphingobium sp. YR768]
Length = 624
Score = 70.5 bits (171), Expect = 1e-11
Identities = 33/54 (61%), Positives = 44/54 (81%)
Frame = -2
Query: 390 IARKLDIRVIAEGIETEAQAEQLVSMGCRLGQGFLFSAAVDRDSMTEMLLQRAQ 229
I +KLDIR++AEGIETE+QA L+++GCR+GQGFL+S AV R MT++L AQ
Sbjct: 543 IGQKLDIRLLAEGIETESQARHLLALGCRIGQGFLYSPAVSRSEMTKLLHLYAQ 596