BLASTX nr result
ID: Glycyrrhiza28_contig00037881
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00037881
(467 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_006023183.1 MULTISPECIES: DNA-binding protein [Rhizobiales] A... 149 1e-44
BAM93152.1 putative prophage CP4-57 regulatory protein [Bradyrhi... 135 3e-38
WP_011746452.1 DNA-binding protein [Paracoccus denitrificans] AB... 124 1e-34
OJU33655.1 DNA-binding protein [Alphaproteobacteria bacterium 65... 124 1e-34
OJU44863.1 DNA-binding protein [Alphaproteobacteria bacterium 65... 124 2e-34
WP_012040772.1 DNA-binding protein [Bradyrhizobium sp. BTAi1] AB... 124 2e-34
WP_011664671.1 DNA-binding protein [Rhodopseudomonas palustris] ... 124 3e-34
KIZ47277.1 DNA-binding protein [Rhodopseudomonas palustris] 123 5e-34
WP_065726903.1 DNA-binding protein [Bradyrhizobium icense] ANV99... 121 3e-33
WP_024920241.1 MULTISPECIES: DNA-binding protein [Afipia] 121 3e-33
WP_041805461.1 DNA-binding protein [Rhodopseudomonas palustris] 120 4e-33
CDX55602.1 putative Prophage CP4-57 regulatory protein (modular ... 120 6e-33
WP_063112037.1 DNA-binding protein [Methylobacterium sp. CCH5-D2... 120 8e-33
CCD87040.1 putative Prophage CP4-57 regulatory protein [Bradyrhi... 122 1e-32
ESZ17366.1 DNA-binding protein [Mesorhizobium sp. L2C085B000] 119 1e-32
WP_011474921.1 DNA-binding protein [Rhodopseudomonas palustris] ... 119 2e-32
WP_073063168.1 DNA-binding protein [Paracoccus solventivorans] S... 119 2e-32
WP_024340652.1 DNA-binding protein [Bradyrhizobium japonicum] 119 2e-32
WP_057144961.1 DNA-binding protein [Mesorhizobium sp. Root695] K... 118 4e-32
WP_053553422.1 DNA-binding protein [Sphingopyxis sp. 113P3] ALC1... 117 6e-32
>WP_006023183.1 MULTISPECIES: DNA-binding protein [Rhizobiales] ABS65531.1 phage
transcriptional regulator, AlpA [Xanthobacter
autotrophicus Py2] ABS67893.1 phage transcriptional
regulator, AlpA [Xanthobacter autotrophicus Py2]
EKS34572.1 hypothetical protein HMPREF9695_04482 [Afipia
broomeae ATCC 49717]
Length = 71
Score = 149 bits (377), Expect = 1e-44
Identities = 71/71 (100%), Positives = 71/71 (100%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA
Sbjct: 1 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 60
Query: 141 WRPRSGSDFND 109
WRPRSGSDFND
Sbjct: 61 WRPRSGSDFND 71
>BAM93152.1 putative prophage CP4-57 regulatory protein [Bradyrhizobium
oligotrophicum S58]
Length = 115
Score = 135 bits (339), Expect = 3e-38
Identities = 64/100 (64%), Positives = 77/100 (77%)
Frame = -3
Query: 417 PYDA*ITLAQQEILGLSGLCNRQ*NPAGGSEAMPAPDRIVRMKTILARTGLSRSTIYRKI 238
P +A +A+ + GLSGL RQ PA G AM PDRI+R+KT+LARTGLSRSTIYRKI
Sbjct: 13 PGNARAPIARLHLFGLSGLTRRQKQPAKGITAMREPDRIIRLKTVLARTGLSRSTIYRKI 72
Query: 237 AEGTFPPRIKISINGAGWRESDIDRWVADPVAWRPRSGSD 118
AEGTFPP+IKIS NG GW ES+I+ W+ADP++WRP SD
Sbjct: 73 AEGTFPPQIKISSNGTGWHESEINGWIADPISWRPSGNSD 112
>WP_011746452.1 DNA-binding protein [Paracoccus denitrificans] ABL68219.1 phage
transcriptional regulator, AlpA [Paracoccus
denitrificans PD1222] SDJ60133.1 transcriptional
regulator, AlpA family [Paracoccus denitrificans]
SFR20109.1 transcriptional regulator, AlpA family
[Paracoccus denitrificans]
Length = 71
Score = 124 bits (312), Expect = 1e-34
Identities = 53/64 (82%), Positives = 62/64 (96%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
MPAPDRI+RMKT+LARTGLS+ST+YRK+AEGTFPPR+KIS+NGAGW ESDIDRW+ADPV
Sbjct: 1 MPAPDRIIRMKTVLARTGLSKSTLYRKMAEGTFPPRLKISVNGAGWHESDIDRWIADPVR 60
Query: 141 WRPR 130
WRP+
Sbjct: 61 WRPK 64
>OJU33655.1 DNA-binding protein [Alphaproteobacteria bacterium 65-37]
Length = 76
Score = 124 bits (312), Expect = 1e-34
Identities = 56/71 (78%), Positives = 66/71 (92%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
MPAPDRIVR+KT+LARTGLSRSTIYRKIAEGTFP +++IS+NGAGWRESDIDRWVA+PVA
Sbjct: 1 MPAPDRIVRLKTVLARTGLSRSTIYRKIAEGTFPAQLRISVNGAGWRESDIDRWVANPVA 60
Query: 141 WRPRSGSDFND 109
W P+ + F+D
Sbjct: 61 WCPKGEAGFDD 71
>OJU44863.1 DNA-binding protein [Alphaproteobacteria bacterium 65-37]
Length = 71
Score = 124 bits (310), Expect = 2e-34
Identities = 58/68 (85%), Positives = 62/68 (91%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
M APDRIVRMKT+LARTGLSRSTIYRKIAEGTFPPRIKISINGAGW+ESDIDRW+ DPV+
Sbjct: 1 MLAPDRIVRMKTVLARTGLSRSTIYRKIAEGTFPPRIKISINGAGWKESDIDRWIEDPVS 60
Query: 141 WRPRSGSD 118
W PR D
Sbjct: 61 WGPRREYD 68
>WP_012040772.1 DNA-binding protein [Bradyrhizobium sp. BTAi1] ABQ32720.1 phage
transcriptional regulator, AlpA [Bradyrhizobium sp.
BTAi1] CEJ12905.1 Prophage CP4-57 regulatory protein
(AlpA) [bacterium YEK0313]
Length = 72
Score = 124 bits (310), Expect = 2e-34
Identities = 58/66 (87%), Positives = 63/66 (95%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
M A DRIVR+KT+LARTGLSRSTIYRKIAEGTFPP+IKIS+NGAGWRESDIDRWVA+PVA
Sbjct: 1 MLASDRIVRLKTVLARTGLSRSTIYRKIAEGTFPPQIKISVNGAGWRESDIDRWVANPVA 60
Query: 141 WRPRSG 124
WRP SG
Sbjct: 61 WRPGSG 66
>WP_011664671.1 DNA-binding protein [Rhodopseudomonas palustris] ABJ07194.1 phage
transcriptional regulator, AlpA [Rhodopseudomonas
palustris BisA53]
Length = 76
Score = 124 bits (310), Expect = 3e-34
Identities = 56/63 (88%), Positives = 60/63 (95%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
M APDRIVRMKT+LARTGLSRSTIYRKIAEGTFPPRIKIS+NGAGW+ESDIDRW+ADP
Sbjct: 1 MLAPDRIVRMKTVLARTGLSRSTIYRKIAEGTFPPRIKISVNGAGWKESDIDRWIADPAG 60
Query: 141 WRP 133
WRP
Sbjct: 61 WRP 63
>KIZ47277.1 DNA-binding protein [Rhodopseudomonas palustris]
Length = 76
Score = 123 bits (308), Expect = 5e-34
Identities = 57/71 (80%), Positives = 63/71 (88%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
M PDRIVRMKT+LARTGLS+STIYRKIAEGTFPPRI+ISING GWRESDI+RW+A+PVA
Sbjct: 1 MREPDRIVRMKTVLARTGLSKSTIYRKIAEGTFPPRIRISINGTGWRESDINRWIANPVA 60
Query: 141 WRPRSGSDFND 109
WRP SD D
Sbjct: 61 WRPTDESDVAD 71
>WP_065726903.1 DNA-binding protein [Bradyrhizobium icense] ANV99608.1 DNA-binding
protein [Bradyrhizobium icense]
Length = 70
Score = 121 bits (303), Expect = 3e-33
Identities = 53/68 (77%), Positives = 63/68 (92%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
M PDRI+R+KT+LARTGLSRST+YRKIAEGTFPP+IKIS+NG+GW ESDI+RW+ADPVA
Sbjct: 1 MRQPDRIIRLKTVLARTGLSRSTLYRKIAEGTFPPQIKISVNGSGWHESDINRWIADPVA 60
Query: 141 WRPRSGSD 118
WRP+ SD
Sbjct: 61 WRPKHESD 68
>WP_024920241.1 MULTISPECIES: DNA-binding protein [Afipia]
Length = 72
Score = 121 bits (303), Expect = 3e-33
Identities = 56/70 (80%), Positives = 61/70 (87%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
M PDRI+RM T+ RTGLSRSTIYRKIAEGTFPP+IKISING GWRESDIDRWVADPVA
Sbjct: 1 MRQPDRIIRMDTVRDRTGLSRSTIYRKIAEGTFPPQIKISINGTGWRESDIDRWVADPVA 60
Query: 141 WRPRSGSDFN 112
WRP +G D +
Sbjct: 61 WRPGNGRDLD 70
>WP_041805461.1 DNA-binding protein [Rhodopseudomonas palustris]
Length = 71
Score = 120 bits (302), Expect = 4e-33
Identities = 54/68 (79%), Positives = 63/68 (92%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
MP PDRI+R+KT+L+RTGLSRSTIYRKI EGTFP +I+IS+NGAGWRESDI+RWVA+PVA
Sbjct: 1 MPEPDRIIRLKTVLSRTGLSRSTIYRKITEGTFPAQIRISVNGAGWRESDINRWVANPVA 60
Query: 141 WRPRSGSD 118
WRPRS D
Sbjct: 61 WRPRSEFD 68
>CDX55602.1 putative Prophage CP4-57 regulatory protein (modular protein)
[Mesorhizobium plurifarium]
Length = 88
Score = 120 bits (302), Expect = 6e-33
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -3
Query: 372 LSGLCNRQ*NPAGGSEAMPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISING 193
+SG Q A G+ MP PDRI+R+KT+LARTGLSRST+YRKIAEGTFP +IKIS+NG
Sbjct: 1 MSGSSRCQMLSAKGNATMPEPDRIIRLKTVLARTGLSRSTMYRKIAEGTFPAQIKISVNG 60
Query: 192 AGWRESDIDRWVADPVAWRPRSG 124
AGWRESDI+ WVADPV W R+G
Sbjct: 61 AGWRESDINLWVADPVCWHTRAG 83
>WP_063112037.1 DNA-binding protein [Methylobacterium sp. CCH5-D2] KZB97305.1
hypothetical protein AU375_06498 [Methylobacterium
radiotolerans]
Length = 72
Score = 120 bits (300), Expect = 8e-33
Identities = 56/66 (84%), Positives = 60/66 (90%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
M PDRI+RM T+ RTGLSRSTIYRKIAEGTFPP+IKISINGAGWRESDIDRWVA+PVA
Sbjct: 1 MRQPDRIIRMNTVRDRTGLSRSTIYRKIAEGTFPPQIKISINGAGWRESDIDRWVANPVA 60
Query: 141 WRPRSG 124
WRP SG
Sbjct: 61 WRPGSG 66
>CCD87040.1 putative Prophage CP4-57 regulatory protein [Bradyrhizobium sp. ORS
285]
Length = 140
Score = 122 bits (305), Expect = 1e-32
Identities = 58/79 (73%), Positives = 64/79 (81%)
Frame = -3
Query: 372 LSGLCNRQ*NPAGGSEAMPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISING 193
LSGL Q PA G AM PDRI+RMKT+LARTGLSRSTIYRKIAEGTFP ++KIS NG
Sbjct: 40 LSGLTTAQNRPAKGITAMREPDRIIRMKTVLARTGLSRSTIYRKIAEGTFPAQLKISSNG 99
Query: 192 AGWRESDIDRWVADPVAWR 136
GW ESDI+RW+ADPV WR
Sbjct: 100 TGWHESDINRWIADPVGWR 118
>ESZ17366.1 DNA-binding protein [Mesorhizobium sp. L2C085B000]
Length = 67
Score = 119 bits (298), Expect = 1e-32
Identities = 53/62 (85%), Positives = 60/62 (96%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
MP PDRI+R+KT+LARTGLSRSTIYRKIAEGTFP +IKISINGAGWRESD++RW+ADPVA
Sbjct: 1 MPEPDRIIRLKTVLARTGLSRSTIYRKIAEGTFPAQIKISINGAGWRESDVNRWIADPVA 60
Query: 141 WR 136
WR
Sbjct: 61 WR 62
>WP_011474921.1 DNA-binding protein [Rhodopseudomonas palustris] ABD90043.1 phage
transcriptional regulator, AlpA [Rhodopseudomonas
palustris BisB18]
Length = 71
Score = 119 bits (298), Expect = 2e-32
Identities = 52/68 (76%), Positives = 62/68 (91%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
MP PDRI+R+KT+L+RTGLSRSTIYRKI EGTFP +I+IS+NGAGWRESDI+RW+ADPVA
Sbjct: 1 MPEPDRIIRLKTVLSRTGLSRSTIYRKITEGTFPAQIRISVNGAGWRESDINRWIADPVA 60
Query: 141 WRPRSGSD 118
WRP+ D
Sbjct: 61 WRPKHEFD 68
>WP_073063168.1 DNA-binding protein [Paracoccus solventivorans] SHL96308.1
transcriptional regulator, AlpA family [Paracoccus
solventivorans]
Length = 72
Score = 119 bits (298), Expect = 2e-32
Identities = 55/68 (80%), Positives = 61/68 (89%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
M PDRIVR+KT+LARTGLSRSTIYRKIAEGTFPP++KIS NGAGW+ESDI+ WVADPV
Sbjct: 1 MRQPDRIVRLKTVLARTGLSRSTIYRKIAEGTFPPQLKISANGAGWKESDINHWVADPVR 60
Query: 141 WRPRSGSD 118
WRPRS D
Sbjct: 61 WRPRSEFD 68
>WP_024340652.1 DNA-binding protein [Bradyrhizobium japonicum]
Length = 71
Score = 119 bits (297), Expect = 2e-32
Identities = 52/68 (76%), Positives = 62/68 (91%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
MP PDRI+R+KT+L RTGLSRSTIYRKI EGTFPP+I+ISI+GAGWRESDI+RW+ADPV+
Sbjct: 1 MPEPDRIIRLKTVLFRTGLSRSTIYRKITEGTFPPQIRISIHGAGWRESDINRWIADPVS 60
Query: 141 WRPRSGSD 118
WRP+ D
Sbjct: 61 WRPKGQFD 68
>WP_057144961.1 DNA-binding protein [Mesorhizobium sp. Root695] KRB20449.1
DNA-binding protein [Mesorhizobium sp. Root695]
Length = 65
Score = 118 bits (295), Expect = 4e-32
Identities = 53/62 (85%), Positives = 59/62 (95%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
MP PDRI+R+KT+LARTGLSRSTIYRKIAEGTFP +IKIS+NGAGWRESDI+RWV DPVA
Sbjct: 1 MPEPDRIIRLKTVLARTGLSRSTIYRKIAEGTFPAQIKISVNGAGWRESDINRWVGDPVA 60
Query: 141 WR 136
WR
Sbjct: 61 WR 62
>WP_053553422.1 DNA-binding protein [Sphingopyxis sp. 113P3] ALC11513.1 DNA-binding
protein [Sphingopyxis sp. 113P3]
Length = 71
Score = 117 bits (294), Expect = 6e-32
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = -3
Query: 321 MPAPDRIVRMKTILARTGLSRSTIYRKIAEGTFPPRIKISINGAGWRESDIDRWVADPVA 142
MP PDRI+R+KT+LARTGLSRSTIYRKIAEGTFP +I+IS NGAGW ESDIDRWVADPV
Sbjct: 1 MPRPDRIIRLKTVLARTGLSRSTIYRKIAEGTFPAQIRISTNGAGWHESDIDRWVADPVR 60
Query: 141 WRP 133
WRP
Sbjct: 61 WRP 63