BLASTX nr result
ID: Glycyrrhiza28_contig00037658
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00037658
(279 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_024579791.1 MULTISPECIES: type II secretion system protein Gs... 177 4e-50
KIU45491.1 Type II and III secretion system protein [Bradyrhizob... 177 5e-50
WP_074126060.1 type II secretion system protein GspD [Bradyrhizo... 163 4e-45
WP_076863156.1 type II secretion system protein GspD [Bradyrhizo... 162 2e-44
SEE31683.1 general secretion pathway protein D [Bradyrhizobium e... 145 1e-38
ERF83107.1 type II secretion system protein D [Bradyrhizobium sp... 144 4e-38
WP_051334576.1 type II secretion system protein GspD [Bradyrhizo... 140 8e-37
WP_066504330.1 type II secretion system protein GspD [Bradyrhizo... 122 2e-30
WP_008973753.1 type II secretion system protein GspD [Bradyrhizo... 119 3e-29
WP_051116094.1 type II secretion system protein GspD [Methylofer... 105 1e-24
WP_018264436.1 type II secretion system protein GspD [Methylosin... 104 4e-24
WP_036310023.1 type II secretion system protein GspD [Methylosin... 103 6e-24
WP_036290678.1 type II secretion system protein GspD [Methylocys... 103 6e-24
WP_051116039.1 type II secretion system protein GspD [Methylofer... 102 2e-23
WP_064033416.1 type II secretion system protein GspD [Methylosin... 101 4e-23
WP_036288043.1 type II secretion system protein GspD [Methylosin... 100 7e-23
WP_064032711.1 type II secretion system protein GspD [Methylosin... 100 1e-22
WP_036309967.1 type II secretion system protein GspD [Methylosin... 99 3e-22
WP_026598293.1 type II secretion system protein GspD [Methylocys... 99 3e-22
WP_068031085.1 type II secretion system protein GspD [Rhodoplane... 95 1e-20
>WP_024579791.1 MULTISPECIES: type II secretion system protein GspD
[Bradyrhizobium] OCX30498.1 type II secretion system
protein GspD [Bradyrhizobium sp. UASWS1016]
Length = 771
Score = 177 bits (449), Expect = 4e-50
Identities = 89/93 (95%), Positives = 91/93 (97%)
Frame = +1
Query: 1 GNANKTQVGFGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYV 180
GNANKTQVGFGDRKDDDQDTTGP QANLGSLPRGIFQNVRITADK+TNAIMVYSNQEDYV
Sbjct: 418 GNANKTQVGFGDRKDDDQDTTGPSQANLGSLPRGIFQNVRITADKSTNAIMVYSNQEDYV 477
Query: 181 VIERALEQLDRPRLQVAVGAMVAEVTLTDALQY 279
VIERALEQLDRPRLQVAV AMVAEVTLT+ALQY
Sbjct: 478 VIERALEQLDRPRLQVAVDAMVAEVTLTNALQY 510
>KIU45491.1 Type II and III secretion system protein [Bradyrhizobium elkanii]
Length = 788
Score = 177 bits (449), Expect = 5e-50
Identities = 89/93 (95%), Positives = 91/93 (97%)
Frame = +1
Query: 1 GNANKTQVGFGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYV 180
GNANKTQVGFGDRKDDDQDTTGP QANLGSLPRGIFQNVRITADK+TNAIMVYSNQEDYV
Sbjct: 435 GNANKTQVGFGDRKDDDQDTTGPSQANLGSLPRGIFQNVRITADKSTNAIMVYSNQEDYV 494
Query: 181 VIERALEQLDRPRLQVAVGAMVAEVTLTDALQY 279
VIERALEQLDRPRLQVAV AMVAEVTLT+ALQY
Sbjct: 495 VIERALEQLDRPRLQVAVDAMVAEVTLTNALQY 527
>WP_074126060.1 type II secretion system protein GspD [Bradyrhizobium sp. NAS96.2]
OKO81387.1 Type II and III secretion system protein
[Bradyrhizobium sp. NAS96.2]
Length = 755
Score = 163 bits (413), Expect = 4e-45
Identities = 85/94 (90%), Positives = 86/94 (91%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 GNANKTQVGFGDRKDDDQDTTGPGQA-NLGSLPRGIFQNVRITADKATNAIMVYSNQEDY 177
GNANKTQVGFGDRKDDDQD GPG LGSLPRGIFQNVRITADKATNAIMVYSNQEDY
Sbjct: 401 GNANKTQVGFGDRKDDDQDAPGPGGGMGLGSLPRGIFQNVRITADKATNAIMVYSNQEDY 460
Query: 178 VVIERALEQLDRPRLQVAVGAMVAEVTLTDALQY 279
VVIERALEQLDRPRLQVAV AMVAEVTLT+ LQY
Sbjct: 461 VVIERALEQLDRPRLQVAVDAMVAEVTLTNQLQY 494
>WP_076863156.1 type II secretion system protein GspD [Bradyrhizobium sp. SEMIA
6399]
Length = 784
Score = 162 bits (409), Expect = 2e-44
Identities = 83/94 (88%), Positives = 86/94 (91%), Gaps = 1/94 (1%)
Frame = +1
Query: 1 GNANKTQVGFGDRKDDDQDTTGPGQAN-LGSLPRGIFQNVRITADKATNAIMVYSNQEDY 177
GNANKTQVGFGDRKDDDQD GPG LGSLPRG+FQNVRITADK+TNAIMVYSNQEDY
Sbjct: 431 GNANKTQVGFGDRKDDDQDAPGPGGGTGLGSLPRGVFQNVRITADKSTNAIMVYSNQEDY 490
Query: 178 VVIERALEQLDRPRLQVAVGAMVAEVTLTDALQY 279
VVIERALEQLDRPRLQVAV AMVAEVTLT+ LQY
Sbjct: 491 VVIERALEQLDRPRLQVAVDAMVAEVTLTNQLQY 524
>SEE31683.1 general secretion pathway protein D [Bradyrhizobium erythrophlei]
Length = 809
Score = 145 bits (366), Expect = 1e-38
Identities = 76/98 (77%), Positives = 82/98 (83%), Gaps = 5/98 (5%)
Frame = +1
Query: 1 GNANKT---QVGFGDRKDDDQDTTGPGQANLG--SLPRGIFQNVRITADKATNAIMVYSN 165
G AN++ QVGF DRKDDDQD GPG G SLPRGIFQNVR+TADK+TNAIMVYSN
Sbjct: 451 GTANRSGAAQVGFSDRKDDDQDAAGPGGGGTGPGSLPRGIFQNVRVTADKSTNAIMVYSN 510
Query: 166 QEDYVVIERALEQLDRPRLQVAVGAMVAEVTLTDALQY 279
QEDY+VIERA+E LDRPRLQVAV AMVAEVTLTD LQY
Sbjct: 511 QEDYLVIERAIESLDRPRLQVAVDAMVAEVTLTDQLQY 548
>ERF83107.1 type II secretion system protein D [Bradyrhizobium sp. DFCI-1]
Length = 797
Score = 144 bits (363), Expect = 4e-38
Identities = 74/94 (78%), Positives = 78/94 (82%), Gaps = 2/94 (2%)
Frame = +1
Query: 4 NANKTQVGFGDRKDDDQDTTGPGQAN--LGSLPRGIFQNVRITADKATNAIMVYSNQEDY 177
N N QVGF DRKDDDQD G G LGSLPRG+FQNVR+TADK+TNAIMVYSNQEDY
Sbjct: 443 NGNAAQVGFSDRKDDDQDMPGAGGGGTGLGSLPRGVFQNVRVTADKSTNAIMVYSNQEDY 502
Query: 178 VVIERALEQLDRPRLQVAVGAMVAEVTLTDALQY 279
VIERA+E LDRPRLQVAV AMVAEVTLTD LQY
Sbjct: 503 QVIERAIESLDRPRLQVAVDAMVAEVTLTDQLQY 536
>WP_051334576.1 type II secretion system protein GspD [Bradyrhizobium sp. Ai1a-2]
Length = 767
Score = 140 bits (353), Expect = 8e-37
Identities = 69/88 (78%), Positives = 76/88 (86%)
Frame = +1
Query: 16 TQVGFGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVVIERA 195
TQ G DRKDDDQD G G + G++PRG+FQNVRITAD++TNAIMVYSNQEDY+VIERA
Sbjct: 419 TQAGLSDRKDDDQDAAGLGASGPGAMPRGVFQNVRITADRSTNAIMVYSNQEDYLVIERA 478
Query: 196 LEQLDRPRLQVAVGAMVAEVTLTDALQY 279
LE LDRPRLQVAV AMVAEVTLTD LQY
Sbjct: 479 LESLDRPRLQVAVDAMVAEVTLTDQLQY 506
>WP_066504330.1 type II secretion system protein GspD [Bradyrhizobium sp. BR 10303]
KWV57806.1 type II secretion system protein GspD
[Bradyrhizobium sp. BR 10303]
Length = 796
Score = 122 bits (306), Expect = 2e-30
Identities = 65/89 (73%), Positives = 73/89 (82%), Gaps = 1/89 (1%)
Frame = +1
Query: 16 TQVGFGDRKDDDQDTTGP-GQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVVIER 192
TQ GF KDDDQD + G A G++PRG+FQNVRITAD +TN+IMVYSNQ+DYVVIER
Sbjct: 440 TQAGFS--KDDDQDASSNLGGAGPGAMPRGVFQNVRITADTSTNSIMVYSNQDDYVVIER 497
Query: 193 ALEQLDRPRLQVAVGAMVAEVTLTDALQY 279
AL +DRPRLQVAV AMVAEVTLTD LQY
Sbjct: 498 ALAAIDRPRLQVAVDAMVAEVTLTDQLQY 526
>WP_008973753.1 type II secretion system protein GspD [Bradyrhizobium sp. STM 3843]
CCE11245.1 Type II and III secretion system protein
[Bradyrhizobium sp. STM 3843]
Length = 786
Score = 119 bits (297), Expect = 3e-29
Identities = 60/85 (70%), Positives = 68/85 (80%), Gaps = 1/85 (1%)
Frame = +1
Query: 28 FGDRKDDDQDTTGP-GQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVVIERALEQ 204
FGD KD QD G + G++PRG+FQNVRITAD TN++M+YSNQEDY VIERALE
Sbjct: 440 FGDHKDAQQDDANTLGGSGAGAMPRGLFQNVRITADTTTNSVMIYSNQEDYRVIERALES 499
Query: 205 LDRPRLQVAVGAMVAEVTLTDALQY 279
LDRP+LQVAV AMVAEVTLTD LQY
Sbjct: 500 LDRPKLQVAVDAMVAEVTLTDQLQY 524
>WP_051116094.1 type II secretion system protein GspD [Methyloferula stellata]
Length = 751
Score = 105 bits (263), Expect = 1e-24
Identities = 53/92 (57%), Positives = 69/92 (75%)
Frame = +1
Query: 4 NANKTQVGFGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVV 183
++ +T F D D+ G GQ + GSLPRG+FQNVRITAD + N+I++YSN +DY V
Sbjct: 398 SSGRTVTSFDDFTGRDKKDQG-GQQDSGSLPRGVFQNVRITADSSNNSIVIYSNLDDYQV 456
Query: 184 IERALEQLDRPRLQVAVGAMVAEVTLTDALQY 279
IER+L +LDRP+LQVA+ A +AEVTLTD LQY
Sbjct: 457 IERSLHELDRPQLQVAIEATIAEVTLTDGLQY 488
>WP_018264436.1 type II secretion system protein GspD [Methylosinus sp. LW4]
Length = 749
Score = 104 bits (259), Expect = 4e-24
Identities = 51/95 (53%), Positives = 71/95 (74%), Gaps = 3/95 (3%)
Frame = +1
Query: 4 NANKTQVGFG---DRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQED 174
N N+ FG ++K+ D + G G + G+LP+G+FQNVRITAD A N+I+V+SNQ+D
Sbjct: 390 NGNQIASAFGSFAEQKNADVEAKGDGVGSSGALPKGVFQNVRITADSANNSIIVFSNQDD 449
Query: 175 YVVIERALEQLDRPRLQVAVGAMVAEVTLTDALQY 279
Y+VIER+L LD+P++QV++ A VAEVTL D LQY
Sbjct: 450 YLVIERSLRALDKPQMQVSIEATVAEVTLNDDLQY 484
>WP_036310023.1 type II secretion system protein GspD [Methylosinus sp. LW3]
Length = 748
Score = 103 bits (258), Expect = 6e-24
Identities = 51/84 (60%), Positives = 67/84 (79%)
Frame = +1
Query: 28 FGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVVIERALEQL 207
F ++K+ D +T + GSLPRG+FQNVRITAD + N+I+VYSNQ+DY VIER+L +L
Sbjct: 394 FNEKKEADAETKNDASSP-GSLPRGVFQNVRITADSSNNSIIVYSNQDDYRVIERSLREL 452
Query: 208 DRPRLQVAVGAMVAEVTLTDALQY 279
DRP++QVA+ A VAEV+LTD LQY
Sbjct: 453 DRPQMQVAIEATVAEVSLTDQLQY 476
>WP_036290678.1 type II secretion system protein GspD [Methylocystis sp. LW5]
Length = 748
Score = 103 bits (258), Expect = 6e-24
Identities = 51/84 (60%), Positives = 67/84 (79%)
Frame = +1
Query: 28 FGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVVIERALEQL 207
F ++K+ D +T + GSLPRG+FQNVRITAD + N+I+VYSNQ+DY VIER+L +L
Sbjct: 394 FNEKKEADAETKNDASSP-GSLPRGVFQNVRITADSSNNSIIVYSNQDDYRVIERSLREL 452
Query: 208 DRPRLQVAVGAMVAEVTLTDALQY 279
DRP++QVA+ A VAEV+LTD LQY
Sbjct: 453 DRPQMQVAIEATVAEVSLTDQLQY 476
>WP_051116039.1 type II secretion system protein GspD [Methyloferula stellata]
Length = 757
Score = 102 bits (254), Expect = 2e-23
Identities = 51/82 (62%), Positives = 63/82 (76%)
Frame = +1
Query: 34 DRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVVIERALEQLDR 213
D+K D + GSLPRGIFQNVRITAD N+I+++SNQ+DY VIER+L +LDR
Sbjct: 421 DKKSSDSEAAS------GSLPRGIFQNVRITADTTNNSIIIFSNQDDYRVIERSLRELDR 474
Query: 214 PRLQVAVGAMVAEVTLTDALQY 279
P+LQVA+ A +AEVTLTDALQY
Sbjct: 475 PQLQVAIEATIAEVTLTDALQY 496
>WP_064033416.1 type II secretion system protein GspD [Methylosinus sp. R-45379]
OAI26224.1 type II secretion system protein GspD
[Methylosinus sp. R-45379]
Length = 744
Score = 101 bits (252), Expect = 4e-23
Identities = 47/84 (55%), Positives = 66/84 (78%)
Frame = +1
Query: 28 FGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVVIERALEQL 207
F ++K+ D + G G GSLP+G+FQN+RITAD A N+I+VYS+Q+DY+V+ER+L L
Sbjct: 398 FAEQKNADNEEKGNGGGVSGSLPKGVFQNMRITADNANNSIVVYSSQDDYLVVERSLRAL 457
Query: 208 DRPRLQVAVGAMVAEVTLTDALQY 279
D+P++QV++ A VAEVTL D LQY
Sbjct: 458 DKPQMQVSIEATVAEVTLNDDLQY 481
>WP_036288043.1 type II secretion system protein GspD [Methylosinus sp. PW1]
Length = 746
Score = 100 bits (250), Expect = 7e-23
Identities = 47/84 (55%), Positives = 66/84 (78%)
Frame = +1
Query: 28 FGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVVIERALEQL 207
F ++K+ + + G + GSLP+G+FQNVRITAD A N+I+VYS+Q+DY+VIER+L L
Sbjct: 399 FAEQKNAENEAKRDGGGSSGSLPKGVFQNVRITADSANNSIVVYSSQDDYLVIERSLRAL 458
Query: 208 DRPRLQVAVGAMVAEVTLTDALQY 279
D+P++QV++ A VAEVTL D LQY
Sbjct: 459 DKPQMQVSIEATVAEVTLNDDLQY 482
>WP_064032711.1 type II secretion system protein GspD [Methylosinus sp. R-45379]
OAI30426.1 type II secretion system protein GspD
[Methylosinus sp. R-45379]
Length = 748
Score = 100 bits (248), Expect = 1e-22
Identities = 50/84 (59%), Positives = 66/84 (78%)
Frame = +1
Query: 28 FGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVVIERALEQL 207
F ++K+ D +T + GSL RG+FQNVRITAD + N+I+VYSNQ+DY VIER+L +L
Sbjct: 394 FNEKKEADAETKNDASSP-GSLLRGVFQNVRITADSSNNSIIVYSNQDDYRVIERSLREL 452
Query: 208 DRPRLQVAVGAMVAEVTLTDALQY 279
DRP++QVA+ A VAEV+LTD LQY
Sbjct: 453 DRPQMQVAIEATVAEVSLTDQLQY 476
>WP_036309967.1 type II secretion system protein GspD [Methylosinus sp. LW3]
Length = 744
Score = 99.4 bits (246), Expect = 3e-22
Identities = 46/84 (54%), Positives = 65/84 (77%)
Frame = +1
Query: 28 FGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVVIERALEQL 207
F ++K+ D + G GSLP+G+FQN+RITAD A N+I+VYS+Q+DY+V+ER+L L
Sbjct: 398 FAEQKNADNEEKSNGVGVSGSLPKGVFQNMRITADNANNSIVVYSSQDDYLVVERSLRAL 457
Query: 208 DRPRLQVAVGAMVAEVTLTDALQY 279
D+P++QV++ A VAEVTL D LQY
Sbjct: 458 DKPQMQVSIEATVAEVTLNDDLQY 481
>WP_026598293.1 type II secretion system protein GspD [Methylocystis sp. LW5]
Length = 744
Score = 99.4 bits (246), Expect = 3e-22
Identities = 46/84 (54%), Positives = 65/84 (77%)
Frame = +1
Query: 28 FGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQEDYVVIERALEQL 207
F ++K+ D + G GSLP+G+FQN+RITAD A N+I+VYS+Q+DY+V+ER+L L
Sbjct: 398 FAEQKNADNEEKSNGVGVSGSLPKGVFQNMRITADNANNSIVVYSSQDDYLVVERSLRAL 457
Query: 208 DRPRLQVAVGAMVAEVTLTDALQY 279
D+P++QV++ A VAEVTL D LQY
Sbjct: 458 DKPQMQVSIEATVAEVTLNDDLQY 481
>WP_068031085.1 type II secretion system protein GspD [Rhodoplanes sp. Z2-YC6860]
Length = 703
Score = 94.7 bits (234), Expect = 1e-20
Identities = 52/97 (53%), Positives = 67/97 (69%), Gaps = 4/97 (4%)
Frame = +1
Query: 1 GNANKTQVG----FGDRKDDDQDTTGPGQANLGSLPRGIFQNVRITADKATNAIMVYSNQ 168
G + TQ G FG KD D G G G+LPRG+F NVRITA+ A N+++VYS Q
Sbjct: 333 GLSRPTQGGDFDSFGGDKDGGPDGGGGGG---GALPRGVFTNVRITANLADNSLVVYSTQ 389
Query: 169 EDYVVIERALEQLDRPRLQVAVGAMVAEVTLTDALQY 279
EDY VIER++ +LDRP++QVA+ A +AEVTLTD Q+
Sbjct: 390 EDYRVIERSIRELDRPQMQVAIDATIAEVTLTDNFQF 426