BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00037651
         (257 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

WP_024584532.1 MULTISPECIES: RNA signal recognition particle [Br...    91   5e-22
SED52594.1 Uncharacterized conserved protein YbaA, DUF1428 famil...    78   1e-16
WP_074127582.1 RNA signal recognition particle [Bradyrhizobium s...    73   1e-14
WP_028162509.1 RNA signal recognition particle [Bradyrhizobium e...    72   2e-14
WP_050628728.1 RNA signal recognition particle [Bradyrhizobium v...    71   4e-14
ERF82995.1 hypothetical protein C207_03854 [Bradyrhizobium sp. D...    70   8e-14
WP_028341411.1 RNA signal recognition particle [Bradyrhizobium e...    70   2e-13
WP_076863760.1 RNA signal recognition particle [Bradyrhizobium s...    69   5e-13
WP_028335567.1 MULTISPECIES: RNA signal recognition particle [Br...    69   5e-13
WP_016843614.1 hypothetical protein [Bradyrhizobium elkanii] OIM...    69   5e-13
SDO12414.1 Uncharacterized conserved protein YbaA, DUF1428 famil...    69   5e-13
WP_027580877.1 RNA signal recognition particle [Bradyrhizobium s...    68   7e-13
WP_065746491.1 RNA signal recognition particle [Bradyrhizobium s...    67   1e-12
WP_028347785.1 RNA signal recognition particle [Bradyrhizobium e...    67   1e-12
SHK59374.1 Uncharacterized conserved protein YbaA, DUF1428 famil...    66   5e-12
WP_029583966.1 RNA signal recognition particle [Bradyrhizobium s...    66   5e-12
SFM15550.1 Uncharacterized conserved protein YbaA, DUF1428 famil...    65   7e-12
WP_068729192.1 RNA signal recognition particle [Tardiphaga sp. V...    65   7e-12
WP_057853599.1 RNA signal recognition particle [Bradyrhizobium v...    65   8e-12
SEH69135.1 Uncharacterized conserved protein YbaA, DUF1428 famil...    65   1e-11

>WP_024584532.1 MULTISPECIES: RNA signal recognition particle [Bradyrhizobium]
           KIU50431.1 RNA signal recognition particle 4.5S RNA
           [Bradyrhizobium elkanii] OCX32336.1 RNA signal
           recognition particle [Bradyrhizobium sp. UASWS1016]
          Length = 119

 Score = 91.3 bits (225), Expect = 5e-22
 Identities = 44/44 (100%), Positives = 44/44 (100%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV
Sbjct: 76  RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 119


>SED52594.1 Uncharacterized conserved protein YbaA, DUF1428 family
           [Bradyrhizobium erythrophlei]
          Length = 119

 Score = 77.8 bits (190), Expect = 1e-16
 Identities = 37/44 (84%), Positives = 40/44 (90%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRDRINAKVMADPRL+ +M+P T PFDV RMIYGGFASLVKV
Sbjct: 76  RAQRDRINAKVMADPRLASSMDPKTAPFDVNRMIYGGFASLVKV 119


>WP_074127582.1 RNA signal recognition particle [Bradyrhizobium sp. NAS96.2]
           OKO77733.1 RNA signal recognition particle 4.5S RNA
           [Bradyrhizobium sp. NAS96.2]
          Length = 118

 Score = 72.8 bits (177), Expect = 1e-14
 Identities = 36/44 (81%), Positives = 40/44 (90%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRDRINAKVMADPR + +M+P T PFD+KRMIYGGFASLVKV
Sbjct: 76  RAQRDRINAKVMADPRFA-SMDPKTAPFDLKRMIYGGFASLVKV 118


>WP_028162509.1 RNA signal recognition particle [Bradyrhizobium elkanii]
          Length = 119

 Score = 72.0 bits (175), Expect = 2e-14
 Identities = 35/44 (79%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRD+INAKVMAD RL P MN  ++PFD KRMIYGGFASLVKV
Sbjct: 76  RAQRDKINAKVMADERLKPMMNGKSMPFDGKRMIYGGFASLVKV 119


>WP_050628728.1 RNA signal recognition particle [Bradyrhizobium viridifuturi]
          Length = 118

 Score = 71.2 bits (173), Expect = 4e-14
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRDRINAKVMADPR + +M+P T PFD++RMIYGGFASLVKV
Sbjct: 76  RAQRDRINAKVMADPRFA-SMDPKTTPFDLERMIYGGFASLVKV 118


>ERF82995.1 hypothetical protein C207_03854 [Bradyrhizobium sp. DFCI-1]
          Length = 118

 Score = 70.5 bits (171), Expect = 8e-14
 Identities = 35/44 (79%), Positives = 40/44 (90%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRDRINAKVMADPR + +M+P T PF+V+RMIYGGFASLVKV
Sbjct: 76  RAQRDRINAKVMADPRFA-SMDPKTAPFNVQRMIYGGFASLVKV 118


>WP_028341411.1 RNA signal recognition particle [Bradyrhizobium elkanii] ODM74145.1
           RNA signal recognition particle [Bradyrhizobium elkanii]
           ODM83137.1 RNA signal recognition particle
           [Bradyrhizobium elkanii]
          Length = 118

 Score = 69.7 bits (169), Expect = 2e-13
 Identities = 36/44 (81%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRDRINAKVMADPRL+ +M    VPFD KRMIYGGFASLVKV
Sbjct: 76  RAQRDRINAKVMADPRLA-SMGTGDVPFDAKRMIYGGFASLVKV 118


>WP_076863760.1 RNA signal recognition particle [Bradyrhizobium sp. SEMIA 6399]
          Length = 118

 Score = 68.6 bits (166), Expect = 5e-13
 Identities = 35/44 (79%), Positives = 37/44 (84%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRDRINAKVMADPRL  +M    VPFD+KRMIYGGF SLVKV
Sbjct: 76  RAQRDRINAKVMADPRLE-SMGTGNVPFDLKRMIYGGFTSLVKV 118


>WP_028335567.1 MULTISPECIES: RNA signal recognition particle [Bradyrhizobium]
           KRQ12876.1 RNA signal recognition particle 4.5S RNA
           [Bradyrhizobium pachyrhizi] SDC78791.1 Uncharacterized
           conserved protein YbaA, DUF1428 family [Bradyrhizobium
           sp. R5] OMI14833.1 RNA signal recognition particle
           [Bradyrhizobium sp. UFLA 03-321]
          Length = 118

 Score = 68.6 bits (166), Expect = 5e-13
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRDRINAKVMADPRL+ +M+   VPFD KRMIYGGFASLVKV
Sbjct: 76  RAQRDRINAKVMADPRLA-SMSMGDVPFDGKRMIYGGFASLVKV 118


>WP_016843614.1 hypothetical protein [Bradyrhizobium elkanii] OIM89488.1 RNA signal
           recognition particle [Bradyrhizobium elkanii]
          Length = 118

 Score = 68.6 bits (166), Expect = 5e-13
 Identities = 36/44 (81%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRDRINAKVMADPRL+ +M    VPFD KRMIYGGFASLVKV
Sbjct: 76  RAQRDRINAKVMADPRLA-SMGTGDVPFDGKRMIYGGFASLVKV 118


>SDO12414.1 Uncharacterized conserved protein YbaA, DUF1428 family [Afipia sp.
           GAS231]
          Length = 119

 Score = 68.6 bits (166), Expect = 5e-13
 Identities = 31/44 (70%), Positives = 36/44 (81%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRDR+NAKVMADPR  P M+P  +PFD KR+IYGGF SLV +
Sbjct: 76  RAQRDRVNAKVMADPRSKPMMDPKAMPFDGKRLIYGGFESLVSL 119


>WP_027580877.1 RNA signal recognition particle [Bradyrhizobium sp. Ai1a-2]
          Length = 119

 Score = 68.2 bits (165), Expect = 7e-13
 Identities = 33/44 (75%), Positives = 35/44 (79%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           RAQRD+INAKVM D RL   MN  + PFD KRMIYGGFASLVKV
Sbjct: 76  RAQRDKINAKVMGDERLKSMMNGKSAPFDAKRMIYGGFASLVKV 119


>WP_065746491.1 RNA signal recognition particle [Bradyrhizobium sp. LMTR 3]
           OCK57822.1 RNA signal recognition particle
           [Bradyrhizobium sp. LMTR 3]
          Length = 120

 Score = 67.4 bits (163), Expect = 1e-12
 Identities = 35/45 (77%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNT-VPFDVKRMIYGGFASLVKV 134
           RAQRD+INAKVMADPRLS  M+P +  PFD KRMIYGGF SLVKV
Sbjct: 76  RAQRDKINAKVMADPRLSEMMDPKSKPPFDGKRMIYGGFESLVKV 120


>WP_028347785.1 RNA signal recognition particle [Bradyrhizobium elkanii]
          Length = 120

 Score = 67.4 bits (163), Expect = 1e-12
 Identities = 35/45 (77%), Positives = 38/45 (84%), Gaps = 1/45 (2%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNT-VPFDVKRMIYGGFASLVKV 134
           RAQRD+INAKVMADPRLS  M+P +  PFD KRMIYGGF SLVKV
Sbjct: 76  RAQRDKINAKVMADPRLSEMMDPKSKPPFDGKRMIYGGFESLVKV 120


>SHK59374.1 Uncharacterized conserved protein YbaA, DUF1428 family
           [Bradyrhizobium lablabi]
          Length = 119

 Score = 65.9 bits (159), Expect = 5e-12
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVK 131
           RAQRDR+NAKVMAD RL+  M+  ++PFD KRMIYGGF SLVK
Sbjct: 76  RAQRDRVNAKVMADKRLAGMMDTKSLPFDAKRMIYGGFESLVK 118


>WP_029583966.1 RNA signal recognition particle [Bradyrhizobium sp. URHD0069]
          Length = 119

 Score = 65.9 bits (159), Expect = 5e-12
 Identities = 31/42 (73%), Positives = 35/42 (83%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLV 128
           RAQRDR+NAKVMAD RL+  M+P  +PFD KRMIYGGF SLV
Sbjct: 76  RAQRDRVNAKVMADKRLAEMMDPKAMPFDGKRMIYGGFESLV 117


>SFM15550.1 Uncharacterized conserved protein YbaA, DUF1428 family
           [Bradyrhizobium sp. NFR13]
          Length = 119

 Score = 65.5 bits (158), Expect = 7e-12
 Identities = 30/44 (68%), Positives = 35/44 (79%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           R  RDRINAKVM DPRL+  M+P  +PFD+KRMIYGGF +LV V
Sbjct: 76  RKDRDRINAKVMKDPRLAKMMDPKAMPFDMKRMIYGGFKTLVSV 119


>WP_068729192.1 RNA signal recognition particle [Tardiphaga sp. Vaf07] KZD25187.1
           RNA signal recognition particle [Tardiphaga sp. Vaf07]
          Length = 119

 Score = 65.5 bits (158), Expect = 7e-12
 Identities = 30/44 (68%), Positives = 35/44 (79%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           R  RDRINAKVM DPRL+  M+P  +PFD+KRMIYGGF +LV V
Sbjct: 76  RKDRDRINAKVMKDPRLAKMMDPKAMPFDMKRMIYGGFKTLVSV 119


>WP_057853599.1 RNA signal recognition particle [Bradyrhizobium valentinum]
           KRR00861.1 RNA signal recognition particle 4.5S RNA
           [Bradyrhizobium valentinum] KRR00911.1 RNA signal
           recognition particle 4.5S RNA [Bradyrhizobium
           valentinum]
          Length = 120

 Score = 65.5 bits (158), Expect = 8e-12
 Identities = 34/45 (75%), Positives = 37/45 (82%), Gaps = 1/45 (2%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNT-VPFDVKRMIYGGFASLVKV 134
           RAQRD+INAKVMADPRLS  M+P    PFD KRMI+GGF SLVKV
Sbjct: 76  RAQRDKINAKVMADPRLSELMDPKAKPPFDGKRMIFGGFESLVKV 120


>SEH69135.1 Uncharacterized conserved protein YbaA, DUF1428 family [Tardiphaga
           sp. OK245]
          Length = 119

 Score = 65.1 bits (157), Expect = 1e-11
 Identities = 30/44 (68%), Positives = 34/44 (77%)
 Frame = +3

Query: 3   RAQRDRINAKVMADPRLSPTMNPNTVPFDVKRMIYGGFASLVKV 134
           R  RDRINAKVM DPRL+  M+P  +PFD KRMIYGGF +LV V
Sbjct: 76  RKDRDRINAKVMKDPRLAKMMDPKAMPFDAKRMIYGGFKTLVSV 119