BLASTX nr result
ID: Glycyrrhiza28_contig00037534
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00037534
(317 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ACI94737.1 transcriptional regulator, LuxR family [Oligotropha c... 189 3e-59
AEI04583.1 transcriptional regulator, LuxR family (plasmid) [Oli... 189 1e-58
WP_056302060.1 LuxR family transcriptional regulator [Afipia sp.... 186 2e-57
WP_038366329.1 LuxR family transcriptional regulator [Bosea sp. ... 121 3e-32
WP_034462738.1 LuxR family transcriptional regulator [Afipia sp.... 120 1e-31
ETR79438.1 LuxR family transcriptional regulator [Afipia sp. P52... 120 1e-31
WP_006023727.1 MULTISPECIES: hypothetical protein [Afipia] EKS33... 119 3e-31
SCB50256.1 LuxR family transcriptional regulator, quorum sensing... 115 6e-30
WP_011505127.1 LuxR family transcriptional regulator [Nitrobacte... 115 7e-30
ABE64982.1 transcriptional regulator, LuxR family (plasmid) [Nit... 112 1e-28
WP_061979841.1 MULTISPECIES: hypothetical protein [Bradyrhizobium] 97 6e-23
CAX27157.1 N-acylhomoserine lactone transcriptional regulator, L... 91 8e-21
ACS42569.1 N-acylhomoserine lactone transcriptional regulator, L... 91 8e-21
WP_015952683.1 autoinducer-binding protein [Methylobacterium ext... 92 1e-20
WP_056117294.1 autoinducer-binding protein [Methylobacterium sp.... 92 1e-20
WP_056256441.1 autoinducer-binding protein [Methylobacterium sp.... 92 1e-20
WP_056164316.1 autoinducer-binding protein [Methylobacterium sp.... 91 3e-20
WP_056149487.1 autoinducer-binding protein [Methylobacterium sp.... 91 3e-20
WP_018043565.1 hypothetical protein [Methylobacterium sp. 88A] 91 3e-20
WP_012255590.1 MULTISPECIES: autoinducer-binding protein [Methyl... 91 4e-20
>ACI94737.1 transcriptional regulator, LuxR family [Oligotropha carboxidovorans
OM5]
Length = 195
Score = 189 bits (479), Expect = 3e-59
Identities = 93/105 (88%), Positives = 96/105 (91%)
Frame = +1
Query: 1 ADFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRST 180
ADFGLVEGFVIPITTLD R AALSFGGARDDLSN DRSAL FLANFAIGHWL+L RPR T
Sbjct: 70 ADFGLVEGFVIPITTLDQRIAALSFGGARDDLSNRDRSALIFLANFAIGHWLYLRRPRPT 129
Query: 181 RNRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSARE 315
N+ LSPRE DCLLWAGEGKTDWEISVILGISRSTVTKHI+SARE
Sbjct: 130 CNKTLSPRELDCLLWAGEGKTDWEISVILGISRSTVTKHITSARE 174
>AEI04583.1 transcriptional regulator, LuxR family (plasmid) [Oligotropha
carboxidovorans OM4] AEI08212.1 transcriptional
regulator, LuxR family (plasmid) [Oligotropha
carboxidovorans OM5]
Length = 244
Score = 189 bits (479), Expect = 1e-58
Identities = 93/105 (88%), Positives = 96/105 (91%)
Frame = +1
Query: 1 ADFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRST 180
ADFGLVEGFVIPITTLD R AALSFGGARDDLSN DRSAL FLANFAIGHWL+L RPR T
Sbjct: 119 ADFGLVEGFVIPITTLDQRIAALSFGGARDDLSNRDRSALIFLANFAIGHWLYLRRPRPT 178
Query: 181 RNRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSARE 315
N+ LSPRE DCLLWAGEGKTDWEISVILGISRSTVTKHI+SARE
Sbjct: 179 CNKTLSPRELDCLLWAGEGKTDWEISVILGISRSTVTKHITSARE 223
>WP_056302060.1 LuxR family transcriptional regulator [Afipia sp. Root123D2]
KQW18216.1 LuxR family transcriptional regulator [Afipia
sp. Root123D2]
Length = 244
Score = 186 bits (472), Expect = 2e-57
Identities = 90/105 (85%), Positives = 97/105 (92%)
Frame = +1
Query: 1 ADFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRST 180
ADFGLVEGFVIP+TTLD R+AALSFGGA+DDLS++DRSAL FLANFAIGHWL L RPRST
Sbjct: 119 ADFGLVEGFVIPVTTLDQRSAALSFGGAKDDLSSNDRSALTFLANFAIGHWLCLRRPRST 178
Query: 181 RNRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSARE 315
R+ LSPREFDCLLWAGEGKTDWEISVILGISR TV KHI+SARE
Sbjct: 179 RSNKLSPREFDCLLWAGEGKTDWEISVILGISRPTVAKHIASARE 223
>WP_038366329.1 LuxR family transcriptional regulator [Bosea sp. UNC402CLCol]
Length = 228
Score = 121 bits (303), Expect = 3e-32
Identities = 61/105 (58%), Positives = 75/105 (71%)
Frame = +1
Query: 1 ADFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRST 180
++FGL G+V+PI+ LD AA+SFGGA+ D S DRS L F A++A+G L S
Sbjct: 103 SEFGLENGYVVPISLLDGNVAAISFGGAQIDPSPDDRSLLGFAASYALGTLLQRRFSASR 162
Query: 181 RNRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSARE 315
+S RE+DCLLW+ EGKTDWEISVILGIS+STVTKHI S RE
Sbjct: 163 AYGRISAREYDCLLWSAEGKTDWEISVILGISKSTVTKHILSVRE 207
>WP_034462738.1 LuxR family transcriptional regulator [Afipia sp. P52-10]
Length = 242
Score = 120 bits (301), Expect = 1e-31
Identities = 57/105 (54%), Positives = 78/105 (74%)
Frame = +1
Query: 1 ADFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRST 180
++FGL +G+V+PI TL+ AA+SFGG ++ ++L F A++A+G LH R
Sbjct: 117 SEFGLKDGYVVPIYTLEGSLAAVSFGGPTTVTDVAELASLHFAASYAVGSHLHRKATRKR 176
Query: 181 RNRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSARE 315
+ L+PRE+DCLLWAGEGKTDWEIS+ILGISRSTV KH++SAR+
Sbjct: 177 LTQALTPREYDCLLWAGEGKTDWEISMILGISRSTVLKHVASARQ 221
>ETR79438.1 LuxR family transcriptional regulator [Afipia sp. P52-10]
Length = 247
Score = 120 bits (301), Expect = 1e-31
Identities = 57/105 (54%), Positives = 78/105 (74%)
Frame = +1
Query: 1 ADFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRST 180
++FGL +G+V+PI TL+ AA+SFGG ++ ++L F A++A+G LH R
Sbjct: 122 SEFGLKDGYVVPIYTLEGSLAAVSFGGPTTVTDVAELASLHFAASYAVGSHLHRKATRKR 181
Query: 181 RNRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSARE 315
+ L+PRE+DCLLWAGEGKTDWEIS+ILGISRSTV KH++SAR+
Sbjct: 182 LTQALTPREYDCLLWAGEGKTDWEISMILGISRSTVLKHVASARQ 226
>WP_006023727.1 MULTISPECIES: hypothetical protein [Afipia] EKS33007.1 hypothetical
protein HMPREF9695_05022 [Afipia broomeae ATCC 49717]
CEG10518.1 Transcriptional activator protein LuxR
[Afipia felis]
Length = 242
Score = 119 bits (298), Expect = 3e-31
Identities = 57/105 (54%), Positives = 79/105 (75%)
Frame = +1
Query: 1 ADFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRST 180
++FGL +G+V+PI T++ AA+SFGG + S+ +AL F A++A+G +LH R
Sbjct: 117 SEFGLRDGYVVPIPTIEGDVAAVSFGGPAYAVEPSEVAALNFAASYAVGSYLHHRIARRR 176
Query: 181 RNRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSARE 315
+ L+PRE DCL+WAGEGKTDWEISVILGISR+TV KH+++ARE
Sbjct: 177 LSAALTPRESDCLVWAGEGKTDWEISVILGISRATVLKHVAAARE 221
>SCB50256.1 LuxR family transcriptional regulator, quorum sensing-dependent
transcriptional regulator [Rhizobium multihospitium]
Length = 242
Score = 115 bits (289), Expect = 6e-30
Identities = 57/105 (54%), Positives = 73/105 (69%)
Frame = +1
Query: 1 ADFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRST 180
A+FGLV G V+P+ TLD + A+SFGG + S R AL F A +A+G LH+ R
Sbjct: 117 AEFGLVHGHVVPVPTLDGKVTAISFGGQDPECSKEARDALTFAAGYAVGRLLHVPRATLD 176
Query: 181 RNRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSARE 315
+ L+PRE DCLLWA EGKTD +I+VILGI+RSTV KH+ SAR+
Sbjct: 177 GDVHLTPREADCLLWAAEGKTDLDIAVILGITRSTVLKHLRSARD 221
>WP_011505127.1 LuxR family transcriptional regulator [Nitrobacter hamburgensis]
ABE65019.1 transcriptional regulator, LuxR family
(plasmid) [Nitrobacter hamburgensis X14]
Length = 231
Score = 115 bits (288), Expect = 7e-30
Identities = 60/106 (56%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
Frame = +1
Query: 1 ADFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRST 180
A+FGL +G+V+PI+T+D +LSFGG +++D S L F A++A+G HLHR +
Sbjct: 106 AEFGLRDGYVVPISTIDGEIVSLSFGGPGTLPASADLSVLNFAASYALGR--HLHRIATW 163
Query: 181 R--NRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSAR 312
R N L+ RE+DCLLWAGEGKT+WEIS ILGIS+STVTKHI +AR
Sbjct: 164 RRVNSNLTAREWDCLLWAGEGKTNWEISAILGISKSTVTKHIMAAR 209
>ABE64982.1 transcriptional regulator, LuxR family (plasmid) [Nitrobacter
hamburgensis X14]
Length = 228
Score = 112 bits (279), Expect = 1e-28
Identities = 57/104 (54%), Positives = 74/104 (71%)
Frame = +1
Query: 1 ADFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRST 180
A+FGL +G+V+PI+T+D A+LSFGG ++D S L F A++A+G LH
Sbjct: 103 AEFGLRDGYVVPISTIDGEIASLSFGGPGTLPVSADLSVLNFAASYALGRHLHRIATWQR 162
Query: 181 RNRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSAR 312
+ L+ RE+DCLLWAGEGKT+WE S ILGISRSTVTKHI +AR
Sbjct: 163 VSSNLTAREWDCLLWAGEGKTNWETSAILGISRSTVTKHIMAAR 206
>WP_061979841.1 MULTISPECIES: hypothetical protein [Bradyrhizobium]
Length = 220
Score = 97.4 bits (241), Expect = 6e-23
Identities = 53/109 (48%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Frame = +1
Query: 1 ADFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRST 180
++FGL EG+V+PI L A SFG D+S + LAF N A G L L RS
Sbjct: 91 SEFGLREGYVVPIGLLGGVQLAFSFGANSMDVSPDELGTLAFATNIAAGQLLELTASRSN 150
Query: 181 RNR----MLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSARE 315
+ +++ RE DCL WA EGKTDWEI+ ILGIS STV KH++S RE
Sbjct: 151 QGEARLALVTARERDCLAWAAEGKTDWEIAAILGISVSTVRKHLASTRE 199
>CAX27157.1 N-acylhomoserine lactone transcriptional regulator, LuxR family
[Methylobacterium extorquens DM4]
Length = 165
Score = 90.5 bits (223), Expect = 8e-21
Identities = 44/103 (42%), Positives = 61/103 (59%)
Frame = +1
Query: 4 DFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRSTR 183
+FGL +GF +P+ TL+ L+F G + D+S R L LA++ +G L + S R
Sbjct: 41 EFGLGDGFTVPLATLEEERGGLTFAGPQLDISPGQRGMLTLLASYVVGQTLLIDNGPSER 100
Query: 184 NRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSAR 312
L+PRE + L W EGKTDWEI ++GISR V H+ SAR
Sbjct: 101 RMGLTPRERESLQWVAEGKTDWEIGELMGISRHGVDFHLRSAR 143
>ACS42569.1 N-acylhomoserine lactone transcriptional regulator, LuxR family
[Methylobacterium extorquens AM1]
Length = 165
Score = 90.5 bits (223), Expect = 8e-21
Identities = 44/103 (42%), Positives = 61/103 (59%)
Frame = +1
Query: 4 DFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRSTR 183
+FGL +GF +P+ TL+ L+F G + D+S R L LA++ +G L + S R
Sbjct: 41 EFGLGDGFTVPLATLEEERGGLTFAGRQLDISPGQRGMLTLLASYVVGQTLLIDNGPSER 100
Query: 184 NRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSAR 312
L+PRE + L W EGKTDWEI ++GISR V H+ SAR
Sbjct: 101 RMGLTPRERESLQWVAEGKTDWEIGELMGISRHGVDFHLRSAR 143
>WP_015952683.1 autoinducer-binding protein [Methylobacterium extorquens]
ACK85742.1 transcriptional regulator, LuxR family
[Methylobacterium extorquens CM4]
Length = 243
Score = 92.0 bits (227), Expect = 1e-20
Identities = 45/103 (43%), Positives = 61/103 (59%)
Frame = +1
Query: 4 DFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRSTR 183
+FGL +GF +P+ TL+ L+F G R D+S R L LA++ +G L + S R
Sbjct: 119 EFGLGDGFTVPLATLEEERGGLTFAGPRLDISPGQRGMLTLLASYVVGQTLLIDNGPSER 178
Query: 184 NRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSAR 312
L+PRE + L W EGKTDWEI ++GISR V H+ SAR
Sbjct: 179 RMGLTPRERESLQWVAEGKTDWEIGELMGISRHGVDFHLRSAR 221
>WP_056117294.1 autoinducer-binding protein [Methylobacterium sp. Leaf122]
KQQ12754.1 autoinducer-binding protein [Methylobacterium
sp. Leaf122]
Length = 243
Score = 92.0 bits (227), Expect = 1e-20
Identities = 45/103 (43%), Positives = 61/103 (59%)
Frame = +1
Query: 4 DFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRSTR 183
+FGL +GF +P+ TL+ L+F G R D+S R L LA++ +G L + S R
Sbjct: 119 EFGLGDGFTVPLATLEEERGGLTFAGPRLDISPGQRGMLTLLASYVVGQTLLIDNGPSER 178
Query: 184 NRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSAR 312
L+PRE + L W EGKTDWEI ++GISR V H+ SAR
Sbjct: 179 RMGLTPRERESLQWVAEGKTDWEIGELMGISRHGVDFHLRSAR 221
>WP_056256441.1 autoinducer-binding protein [Methylobacterium sp. Leaf93]
KQP04684.1 autoinducer-binding protein [Methylobacterium
sp. Leaf93]
Length = 243
Score = 92.0 bits (227), Expect = 1e-20
Identities = 47/103 (45%), Positives = 60/103 (58%)
Frame = +1
Query: 4 DFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRSTR 183
DFGL +G IP+ TLD TA S G R + +DR L +A +A GH L L+
Sbjct: 119 DFGLCDGLTIPLMTLDGETAGFSVSGERLVIDPADRGMLQLIATYAFGHLLLLNGQSPAA 178
Query: 184 NRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSAR 312
+ L+PRE + L WA EGKTDWEI ++GIS V H+ SAR
Sbjct: 179 SARLAPREREALQWAAEGKTDWEIGEVMGISAHGVDFHLRSAR 221
>WP_056164316.1 autoinducer-binding protein [Methylobacterium sp. Leaf106]
KQP37682.1 autoinducer-binding protein [Methylobacterium
sp. Leaf106]
Length = 243
Score = 90.9 bits (224), Expect = 3e-20
Identities = 47/103 (45%), Positives = 59/103 (57%)
Frame = +1
Query: 4 DFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRSTR 183
DFGL +G IP+ TLD TA S G R + +DR L A +A GH L L+
Sbjct: 119 DFGLRDGLTIPLMTLDGETAGFSVSGERLAIDPADRGMLQLAATYAFGHLLLLNGQNPAA 178
Query: 184 NRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSAR 312
+ L+PRE + L WA EGKTDWEI ++GIS V H+ SAR
Sbjct: 179 SARLAPREREALQWAAEGKTDWEIGEVMGISAHGVDFHLRSAR 221
>WP_056149487.1 autoinducer-binding protein [Methylobacterium sp. Leaf85]
KQO41472.1 autoinducer-binding protein [Methylobacterium
sp. Leaf85]
Length = 243
Score = 90.9 bits (224), Expect = 3e-20
Identities = 47/103 (45%), Positives = 59/103 (57%)
Frame = +1
Query: 4 DFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRSTR 183
DFGL +G IP+ TLD TA S G R + +DR L A +A GH L L+
Sbjct: 119 DFGLRDGLTIPLMTLDGETAGFSVSGERLAIDPADRGMLQLAATYAFGHLLLLNGQNPAA 178
Query: 184 NRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSAR 312
+ L+PRE + L WA EGKTDWEI ++GIS V H+ SAR
Sbjct: 179 SARLAPREREALQWAAEGKTDWEIGEVMGISAHGVDFHLRSAR 221
>WP_018043565.1 hypothetical protein [Methylobacterium sp. 88A]
Length = 243
Score = 90.9 bits (224), Expect = 3e-20
Identities = 47/103 (45%), Positives = 59/103 (57%)
Frame = +1
Query: 4 DFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRSTR 183
DFGL +G IP+ TLD TA S G R + +DR L A +A GH L L+
Sbjct: 119 DFGLRDGLTIPLMTLDGETAGFSVSGERLAIDPADRGMLQLAATYAFGHLLLLNGQNPAA 178
Query: 184 NRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSAR 312
+ L+PRE + L WA EGKTDWEI ++GIS V H+ SAR
Sbjct: 179 SARLAPREREALQWAAEGKTDWEIGEVMGISAHGVDFHLRSAR 221
>WP_012255590.1 MULTISPECIES: autoinducer-binding protein [Methylobacterium]
ABY32882.1 Autoinducer-binding domain protein
[Methylobacterium extorquens PA1] KQO87107.1
autoinducer-binding protein [Methylobacterium sp.
Leaf90] KQO88546.1 autoinducer-binding protein
[Methylobacterium sp. Leaf92] KQP86125.1
autoinducer-binding protein [Methylobacterium sp.
Leaf119] KQP99515.1 autoinducer-binding protein
[Methylobacterium sp. Leaf121]
Length = 243
Score = 90.5 bits (223), Expect = 4e-20
Identities = 44/103 (42%), Positives = 61/103 (59%)
Frame = +1
Query: 4 DFGLVEGFVIPITTLDHRTAALSFGGARDDLSNSDRSALAFLANFAIGHWLHLHRPRSTR 183
+FGL +GF +P+ TL+ L+F G + D+S R L LA++ +G L + S R
Sbjct: 119 EFGLGDGFTVPLATLEEERGGLTFAGPQLDISPGQRGMLTLLASYVVGQTLLIDNGPSER 178
Query: 184 NRMLSPREFDCLLWAGEGKTDWEISVILGISRSTVTKHISSAR 312
L+PRE + L W EGKTDWEI ++GISR V H+ SAR
Sbjct: 179 RMGLTPRERESLQWVAEGKTDWEIGELMGISRHGVDFHLRSAR 221