BLASTX nr result
ID: Glycyrrhiza28_contig00037511
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00037511
(419 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_061979914.1 MULTISPECIES: transcriptional regulator [Bradyrhi... 201 7e-65
SCB50343.1 transcriptional regulator [Rhizobium multihospitium] 147 1e-43
WP_024584974.1 MULTISPECIES: transcriptional regulator [Bradyrhi... 97 2e-23
WP_034462699.1 transcriptional regulator [Afipia sp. P52-10] ETR... 96 2e-23
WP_043855077.1 transcriptional regulator [Bradyrhizobium elkanii... 94 2e-22
WP_002719022.1 MULTISPECIES: transcriptional regulator [Bradyrhi... 94 2e-22
WP_011505044.1 transcriptional regulator [Nitrobacter hamburgens... 93 6e-22
WP_013913429.1 transcriptional regulator [Oligotropha carboxidov... 92 1e-21
CAX24237.1 putative transcriptional regulator [Methylobacterium ... 79 1e-16
EKS32925.1 hypothetical protein HMPREF9695_04940 [Afipia broomea... 77 8e-16
KIS48716.1 helix-turn-helix family protein [Burkholderia cepacia] 59 1e-08
WP_012492888.1 MULTISPECIES: transcriptional regulator [Burkhold... 55 1e-07
WP_005896029.1 transcriptional regulator [Pseudomonas coronafaci... 55 9e-07
WP_074846298.1 transcriptional regulator [Pseudomonas syringae] 55 1e-06
WP_069557923.1 transcriptional regulator [Pseudomonas sp. AP42] ... 54 2e-06
WP_044288215.1 transcriptional regulator [Pseudomonas aeruginosa... 52 5e-06
>WP_061979914.1 MULTISPECIES: transcriptional regulator [Bradyrhizobium]
Length = 100
Score = 201 bits (511), Expect = 7e-65
Identities = 100/100 (100%), Positives = 100/100 (100%)
Frame = -1
Query: 416 MLSNTRPPKAARVSNENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAG 237
MLSNTRPPKAARVSNENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAG
Sbjct: 1 MLSNTRPPKAARVSNENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAG 60
Query: 236 NPSLDTVEFIAERVGVHPSALFPLPGECSSQGDEPIPPKG 117
NPSLDTVEFIAERVGVHPSALFPLPGECSSQGDEPIPPKG
Sbjct: 61 NPSLDTVEFIAERVGVHPSALFPLPGECSSQGDEPIPPKG 100
>SCB50343.1 transcriptional regulator [Rhizobium multihospitium]
Length = 102
Score = 147 bits (372), Expect = 1e-43
Identities = 76/98 (77%), Positives = 81/98 (82%)
Frame = -1
Query: 416 MLSNTRPPKAARVSNENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAG 237
MLSNTR +A R+S E+SLLRAFQ RLEALR E+GLSRRAFADRLGIPRSSYFHLMSDAG
Sbjct: 1 MLSNTRTSRAERISGEHSLLRAFQTRLEALRRETGLSRRAFADRLGIPRSSYFHLMSDAG 60
Query: 236 NPSLDTVEFIAERVGVHPSALFPLPGECSSQGDEPIPP 123
NPSLDTVE IAERVGVHPSALFP P S D+ P
Sbjct: 61 NPSLDTVELIAERVGVHPSALFPPPSAVSPLDDQSESP 98
>WP_024584974.1 MULTISPECIES: transcriptional regulator [Bradyrhizobium] KIU54037.1
transcriptional regulator [Bradyrhizobium elkanii]
OCX26004.1 transcriptional regulator (plasmid)
[Bradyrhizobium sp. UASWS1016]
Length = 103
Score = 96.7 bits (239), Expect = 2e-23
Identities = 50/73 (68%), Positives = 56/73 (76%)
Frame = -1
Query: 392 KAARVSNENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVE 213
KAA + +L RAFQA LEALR ESGLSRR FA++LGIPRSSYFHLM+ A NPSLD +E
Sbjct: 9 KAAHAAQGGTLRRAFQAGLEALRLESGLSRRKFAEQLGIPRSSYFHLMTSAANPSLDYIE 68
Query: 212 FIAERVGVHPSAL 174
IAER GV P L
Sbjct: 69 LIAERAGVDPLRL 81
>WP_034462699.1 transcriptional regulator [Afipia sp. P52-10] ETR79456.1
transcriptional regulator [Afipia sp. P52-10]
Length = 97
Score = 96.3 bits (238), Expect = 2e-23
Identities = 49/79 (62%), Positives = 58/79 (73%)
Frame = -1
Query: 392 KAARVSNENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVE 213
KAA ++ N+LL AFQ LE LR E GL+R AFA+RLGIPRSSYFHLM+DA NPSLD +E
Sbjct: 9 KAAHAAHGNTLLIAFQDALECLRKEMGLTRCAFAERLGIPRSSYFHLMTDAANPSLDYIE 68
Query: 212 FIAERVGVHPSALFPLPGE 156
IAER GV P + G+
Sbjct: 69 LIAERAGVEPISFLGKAGQ 87
>WP_043855077.1 transcriptional regulator [Bradyrhizobium elkanii] KIU52649.1
transcriptional regulator [Bradyrhizobium elkanii]
Length = 103
Score = 94.4 bits (233), Expect = 2e-22
Identities = 49/73 (67%), Positives = 56/73 (76%)
Frame = -1
Query: 392 KAARVSNENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVE 213
KAA + ++L AFQA LEALR ESGLSRR FA++LGIPRSSYFHLM+ A NPSLD +E
Sbjct: 9 KAAHAAQGSTLRSAFQAGLEALRLESGLSRRDFAEQLGIPRSSYFHLMTSAANPSLDYIE 68
Query: 212 FIAERVGVHPSAL 174
IAER GV P L
Sbjct: 69 LIAERAGVDPLRL 81
>WP_002719022.1 MULTISPECIES: transcriptional regulator [Bradyrhizobiaceae]
EKS26846.1 hypothetical protein HMPREF9697_03962 [Afipia
felis ATCC 53690] KIZ48195.1 transcriptional regulator
[Rhodopseudomonas palustris] KQW18155.1 transcriptional
regulator [Afipia sp. Root123D2]
Length = 103
Score = 94.0 bits (232), Expect = 2e-22
Identities = 48/73 (65%), Positives = 55/73 (75%)
Frame = -1
Query: 392 KAARVSNENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVE 213
KAA + ++L AF A LEALR ESGLSRR FA+RLGIPRSSYFHLM+ A NPSLD +E
Sbjct: 9 KAAHAAQGSTLRSAFHAGLEALRLESGLSRREFAERLGIPRSSYFHLMTSAANPSLDYIE 68
Query: 212 FIAERVGVHPSAL 174
IAER G+ P L
Sbjct: 69 LIAERAGIDPLRL 81
>WP_011505044.1 transcriptional regulator [Nitrobacter hamburgensis] ABE65102.1
transcriptional regulator (plasmid) [Nitrobacter
hamburgensis X14]
Length = 103
Score = 92.8 bits (229), Expect = 6e-22
Identities = 47/73 (64%), Positives = 55/73 (75%)
Frame = -1
Query: 392 KAARVSNENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVE 213
KAA + ++L +AFQA LE LR ESGLSRR FA+ LGIPRSSYFHLM+ A NPSLD +E
Sbjct: 9 KAAHTAQGSTLRQAFQAGLEGLRLESGLSRRKFAEHLGIPRSSYFHLMTTAANPSLDYIE 68
Query: 212 FIAERVGVHPSAL 174
IAER G+ P L
Sbjct: 69 LIAERAGIDPLRL 81
>WP_013913429.1 transcriptional regulator [Oligotropha carboxidovorans] AEI04577.1
helix-turn-helix domain protein (plasmid) [Oligotropha
carboxidovorans OM4] AEI08206.1 helix-turn-helix domain
protein (plasmid) [Oligotropha carboxidovorans OM5]
Length = 103
Score = 92.0 bits (227), Expect = 1e-21
Identities = 48/82 (58%), Positives = 57/82 (69%)
Frame = -1
Query: 392 KAARVSNENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVE 213
KAA + ++L AFQA LE LR SGLSRR FA+RLGIPRSSYFHLM+ A NPSLD +E
Sbjct: 9 KAAHAAEGSTLRHAFQAGLEELRVGSGLSRREFAERLGIPRSSYFHLMTSAANPSLDYIE 68
Query: 212 FIAERVGVHPSALFPLPGECSS 147
IAER G+ P L G ++
Sbjct: 69 LIAERAGIDPLRLLYRQGSSTA 90
>CAX24237.1 putative transcriptional regulator [Methylobacterium extorquens
DM4]
Length = 77
Score = 78.6 bits (192), Expect = 1e-16
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = -1
Query: 338 LEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVEFIAERVGVHPSAL 174
+EALR ESGLSRR FA++LGI RSSYFHLM+ A NPSLD +E IAER GV+P L
Sbjct: 1 MEALRLESGLSRREFAEQLGIARSSYFHLMTAAANPSLDYIELIAERAGVNPLRL 55
>EKS32925.1 hypothetical protein HMPREF9695_04940 [Afipia broomeae ATCC 49717]
Length = 109
Score = 77.4 bits (189), Expect = 8e-16
Identities = 42/73 (57%), Positives = 49/73 (67%)
Frame = -1
Query: 392 KAARVSNENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVE 213
KA + L+ AFQ+ LEALR E+ L+R FA LGIPRSSYFHLM+ A NPSL +E
Sbjct: 9 KADHAAKGCLLIGAFQSGLEALRLEAQLTRGEFAKSLGIPRSSYFHLMTTAANPSLSYIE 68
Query: 212 FIAERVGVHPSAL 174
IAER GV P L
Sbjct: 69 LIAERAGVDPLTL 81
>KIS48716.1 helix-turn-helix family protein [Burkholderia cepacia]
Length = 107
Score = 58.9 bits (141), Expect = 1e-08
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = -1
Query: 398 PPKAARVSNENSLLRAFQARLEALRSE-SGLSRRAFADRLGIPRSSYFHLMSDAGNPSLD 222
P R+ SL + F AR+ LR E + LS+ AFAD++G RS + + + NPSLD
Sbjct: 27 PRNITRMKTHTSLRQRFGARVRQLRKEKTDLSQEAFADKVGFARSYFGRVETGKANPSLD 86
Query: 221 TVEFIAERVGVHPSALF 171
++ IAE +GV SALF
Sbjct: 87 AIQTIAEGLGVEVSALF 103
>WP_012492888.1 MULTISPECIES: transcriptional regulator [Burkholderia cepacia
complex] CAR53400.1 putative DNA-binding protein
[Burkholderia cenocepacia J2315] ERI28000.1 DNA-binding
helix-turn-helix protein [Burkholderia cenocepacia BC7]
KKI84318.1 XRE family transcriptional regulator
[Burkholderia cenocepacia] ONR64599.1 transcriptional
regulator [Burkholderia cenocepacia] ONR65046.1
transcriptional regulator [Burkholderia cenocepacia]
ONR67381.1 transcriptional regulator [Burkholderia
cenocepacia] ONR84437.1 transcriptional regulator
[Burkholderia cenocepacia] ONR98533.1 transcriptional
regulator [Burkholderia cenocepacia] ONR99258.1
transcriptional regulator [Burkholderia cenocepacia]
ONS06154.1 transcriptional regulator [Burkholderia
cenocepacia] ONS06271.1 transcriptional regulator
[Burkholderia cenocepacia] ONS07863.1 transcriptional
regulator [Burkholderia cenocepacia] ONS21023.1
transcriptional regulator [Burkholderia cenocepacia]
ONS33618.1 transcriptional regulator [Burkholderia
cenocepacia] ONS34246.1 transcriptional regulator
[Burkholderia cenocepacia] ONS45614.1 transcriptional
regulator [Burkholderia cenocepacia] ONS49937.1
transcriptional regulator [Burkholderia cenocepacia]
ONS66417.1 transcriptional regulator [Burkholderia
cenocepacia] ONS74351.1 transcriptional regulator
[Burkholderia cenocepacia] ONX54705.1 transcriptional
regulator [Burkholderia cenocepacia] ONX55120.1
transcriptional regulator [Burkholderia cenocepacia]
ONX55962.1 transcriptional regulator [Burkholderia
cenocepacia] ONX77268.1 transcriptional regulator
[Burkholderia cenocepacia] ONX81302.1 transcriptional
regulator [Burkholderia cenocepacia] ONY00093.1
transcriptional regulator [Burkholderia cenocepacia]
ONY00778.1 transcriptional regulator [Burkholderia
cenocepacia] ONY08343.1 transcriptional regulator
[Burkholderia cenocepacia] ONY12421.1 transcriptional
regulator [Burkholderia cenocepacia] ONY19951.1
transcriptional regulator [Burkholderia cenocepacia]
ONY29073.1 transcriptional regulator [Burkholderia
cenocepacia] ONY42218.1 transcriptional regulator
[Burkholderia cenocepacia] ONY51526.1 transcriptional
regulator [Burkholderia cenocepacia] ONY59273.1
transcriptional regulator [Burkholderia cenocepacia]
ONY59601.1 transcriptional regulator [Burkholderia
cenocepacia] ONY91839.1 transcriptional regulator
[Burkholderia cenocepacia] ONZ01356.1 transcriptional
regulator [Burkholderia cenocepacia] ONZ13469.1
transcriptional regulator [Burkholderia cenocepacia]
ONZ20564.1 transcriptional regulator [Burkholderia
cenocepacia] ONZ21680.1 transcriptional regulator
[Burkholderia cenocepacia] ONZ30221.1 transcriptional
regulator [Burkholderia cenocepacia] ONZ46008.1
transcriptional regulator [Burkholderia cenocepacia]
ONZ56829.1 transcriptional regulator [Burkholderia
cenocepacia] ONZ57482.1 transcriptional regulator
[Burkholderia cenocepacia] ONZ62459.1 transcriptional
regulator [Burkholderia cenocepacia] ONZ63457.1
transcriptional regulator [Burkholderia cenocepacia]
ONZ79719.1 transcriptional regulator [Burkholderia
cenocepacia] ONZ91178.1 transcriptional regulator
[Burkholderia cenocepacia] ONZ96357.1 transcriptional
regulator [Burkholderia cenocepacia] ONZ99005.1
transcriptional regulator [Burkholderia cenocepacia]
Length = 75
Score = 55.5 bits (132), Expect = 1e-07
Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = -1
Query: 380 VSNENSLLRAFQARLEALRSE-SGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVEFIA 204
+ SL + F AR+ LR E + LS+ AFAD++G RS + + + NPSLD ++ IA
Sbjct: 1 MKTHTSLRQRFGARVRQLRKEKTDLSQEAFADKVGFARSYFGRVETGKANPSLDAIQTIA 60
Query: 203 ERVGVHPSALF 171
E +GV SALF
Sbjct: 61 EGLGVEVSALF 71
>WP_005896029.1 transcriptional regulator [Pseudomonas coronafaciens] EGI05095.1
transcriptional regulator, XRE family protein
[Pseudomonas coronafaciens pv. oryzae str. 1_6]
Length = 160
Score = 55.1 bits (131), Expect = 9e-07
Identities = 30/82 (36%), Positives = 43/82 (52%)
Frame = -1
Query: 371 ENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVEFIAERVG 192
+ SL + F R+ LR SG+S+ AFAD I RS + NPSLD ++ +AE +G
Sbjct: 2 KTSLRKRFGLRVRELRIASGMSQEAFADHASIARSYMSRIERGGANPSLDAIQVLAEALG 61
Query: 191 VHPSALFPLPGECSSQGDEPIP 126
V ALF + +S +P
Sbjct: 62 VDAGALFEIVEPATSYDAVEVP 83
>WP_074846298.1 transcriptional regulator [Pseudomonas syringae]
Length = 160
Score = 54.7 bits (130), Expect = 1e-06
Identities = 30/82 (36%), Positives = 43/82 (52%)
Frame = -1
Query: 371 ENSLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVEFIAERVG 192
+ SL + F R+ LR SG+S+ AFAD I RS + NPSLD ++ +AE +G
Sbjct: 2 KTSLRKRFGLRVRELRIASGMSQEAFADHASIARSYMSRIERGGANPSLDAIQALAEALG 61
Query: 191 VHPSALFPLPGECSSQGDEPIP 126
V ALF + +S +P
Sbjct: 62 VDAGALFEIVEPATSYDAVEVP 83
>WP_069557923.1 transcriptional regulator [Pseudomonas sp. AP42] OEC50640.1
transcriptional regulator [Pseudomonas sp. AP42]
Length = 158
Score = 53.9 bits (128), Expect = 2e-06
Identities = 31/80 (38%), Positives = 41/80 (51%)
Frame = -1
Query: 365 SLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVEFIAERVGVH 186
SL + F R LR SGLS+ AFAD + RS L NPSLD +E +A+ +GV
Sbjct: 4 SLRQRFGQRFRELRLASGLSQEAFADHASMARSYLSRLERGMANPSLDAIEGLAKALGVD 63
Query: 185 PSALFPLPGECSSQGDEPIP 126
P LF + + Q +P
Sbjct: 64 PRELFEIVEPATPQDVAEVP 83
>WP_044288215.1 transcriptional regulator [Pseudomonas aeruginosa] AKG00189.1 XRE
family transcriptional regulator [Pseudomonas
aeruginosa] OKS07105.1 transcriptional regulator
[Pseudomonas aeruginosa] OKS42588.1 transcriptional
regulator [Pseudomonas aeruginosa]
Length = 87
Score = 51.6 bits (122), Expect = 5e-06
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = -1
Query: 365 SLLRAFQARLEALRSESGLSRRAFADRLGIPRSSYFHLMSDAGNPSLDTVEFIAERVGVH 186
SL R F R+ LR SGL++ AFAD+ G R+ + + NPSLD ++ +A+ +GV
Sbjct: 5 SLRRQFGHRIRELRLASGLNQEAFADKCGFARTYMSRIETGGANPSLDAIKTLADALGVE 64
Query: 185 PSALF-PLPGECSSQGDEPIPPK 120
+ LF L + + Q PP+
Sbjct: 65 LAELFRGLQQQTTIQPRRATPPQ 87