BLASTX nr result
ID: Glycyrrhiza28_contig00034792
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00034792
(344 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
WP_043855679.1 spermidine synthase [Bradyrhizobium elkanii] KIU4... 215 3e-63
WP_024579853.1 spermidine synthase [Bradyrhizobium sp. OHSU_III]... 215 3e-63
WP_063695354.1 spermidine synthase [Bradyrhizobium embrapense] 207 3e-60
WP_057014861.1 spermidine synthase [Bradyrhizobium pachyrhizi] K... 206 4e-60
WP_050383272.1 spermidine synthase [Bradyrhizobium pachyrhizi] 206 4e-60
WP_038382922.1 spermidine synthase [Bradyrhizobium elkanii] 206 4e-60
WP_028332717.1 spermidine synthase [Bradyrhizobium elkanii] 206 4e-60
WP_028342467.1 spermidine synthase [Bradyrhizobium elkanii] 205 8e-60
WP_076823888.1 hypothetical protein [Bradyrhizobium sp. UFLA 03-... 205 9e-60
SDE38320.1 spermidine synthase [Bradyrhizobium sp. R5] 205 1e-59
WP_029078222.1 spermidine synthase [Bradyrhizobium sp. th.b2] 201 2e-58
SEC84725.1 spermidine synthase [Bradyrhizobium erythrophlei] 202 3e-58
WP_047860491.1 spermidine synthase [Archangium gephyra] AKJ07481... 54 5e-06
>WP_043855679.1 spermidine synthase [Bradyrhizobium elkanii] KIU44169.1
hypothetical protein QU41_31565 [Bradyrhizobium elkanii]
Length = 855
Score = 215 bits (547), Expect = 3e-63
Identities = 114/114 (100%), Positives = 114/114 (100%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP
Sbjct: 281 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 340
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG
Sbjct: 341 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 394
>WP_024579853.1 spermidine synthase [Bradyrhizobium sp. OHSU_III] OCX27895.1
hypothetical protein QU42_28585 [Bradyrhizobium sp.
UASWS1016]
Length = 855
Score = 215 bits (547), Expect = 3e-63
Identities = 114/114 (100%), Positives = 114/114 (100%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP
Sbjct: 281 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 340
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG
Sbjct: 341 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 394
>WP_063695354.1 spermidine synthase [Bradyrhizobium embrapense]
Length = 853
Score = 207 bits (526), Expect = 3e-60
Identities = 109/114 (95%), Positives = 111/114 (97%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVG AL P
Sbjct: 279 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGAALSP 338
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
IVS L+PVPAQELLGGDVSFFLICA+ALLLPTTLIGISFPLASELTVMQMSALG
Sbjct: 339 IVSGLVPVPAQELLGGDVSFFLICAVALLLPTTLIGISFPLASELTVMQMSALG 392
>WP_057014861.1 spermidine synthase [Bradyrhizobium pachyrhizi] KRQ13920.1
hypothetical protein AOQ73_00050 [Bradyrhizobium
pachyrhizi]
Length = 853
Score = 206 bits (525), Expect = 4e-60
Identities = 108/114 (94%), Positives = 111/114 (97%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKART+GVAL P
Sbjct: 279 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTMGVALSP 338
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
IVS LLPVP QELLGGDVSFFL+CA+ALLLPTTLIGISFPLASELTVMQMSALG
Sbjct: 339 IVSGLLPVPVQELLGGDVSFFLVCAVALLLPTTLIGISFPLASELTVMQMSALG 392
>WP_050383272.1 spermidine synthase [Bradyrhizobium pachyrhizi]
Length = 830
Score = 206 bits (524), Expect = 4e-60
Identities = 107/114 (93%), Positives = 111/114 (97%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKART+GVAL P
Sbjct: 256 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTMGVALSP 315
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
+VS LLPVP QELLGGDVSFFL+CA+ALLLPTTLIGISFPLASELTVMQMSALG
Sbjct: 316 VVSGLLPVPVQELLGGDVSFFLVCAVALLLPTTLIGISFPLASELTVMQMSALG 369
>WP_038382922.1 spermidine synthase [Bradyrhizobium elkanii]
Length = 830
Score = 206 bits (524), Expect = 4e-60
Identities = 107/114 (93%), Positives = 111/114 (97%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKART+GVAL P
Sbjct: 256 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTMGVALSP 315
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
+VS LLPVP QELLGGDVSFFL+CA+ALLLPTTLIGISFPLASELTVMQMSALG
Sbjct: 316 VVSGLLPVPVQELLGGDVSFFLVCAVALLLPTTLIGISFPLASELTVMQMSALG 369
>WP_028332717.1 spermidine synthase [Bradyrhizobium elkanii]
Length = 836
Score = 206 bits (524), Expect = 4e-60
Identities = 107/114 (93%), Positives = 111/114 (97%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKART+GVAL P
Sbjct: 262 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTMGVALSP 321
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
+VS LLPVP QELLGGDVSFFL+CA+ALLLPTTLIGISFPLASELTVMQMSALG
Sbjct: 322 VVSGLLPVPVQELLGGDVSFFLVCAVALLLPTTLIGISFPLASELTVMQMSALG 375
>WP_028342467.1 spermidine synthase [Bradyrhizobium elkanii]
Length = 830
Score = 205 bits (522), Expect = 8e-60
Identities = 107/114 (93%), Positives = 111/114 (97%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICA+LLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKART+GVAL P
Sbjct: 256 LGVYLLGLVIGALICAKLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTMGVALSP 315
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
IVS LLPVP QELLGGDVSFFL+CA+ALLLPTTLIGISFPLASELTVMQMSALG
Sbjct: 316 IVSGLLPVPVQELLGGDVSFFLVCAVALLLPTTLIGISFPLASELTVMQMSALG 369
>WP_076823888.1 hypothetical protein [Bradyrhizobium sp. UFLA 03-321] OMI15410.1
hypothetical protein BSN85_00490 [Bradyrhizobium sp.
UFLA 03-321]
Length = 843
Score = 205 bits (522), Expect = 9e-60
Identities = 107/114 (93%), Positives = 111/114 (97%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVG+LGKART+GVAL P
Sbjct: 269 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGMLGKARTMGVALSP 328
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
IVS LLPVP QELLGGDVSFFL+CA+ALLLPTTLIGISFPLASELTVMQMSALG
Sbjct: 329 IVSGLLPVPVQELLGGDVSFFLVCAVALLLPTTLIGISFPLASELTVMQMSALG 382
>SDE38320.1 spermidine synthase [Bradyrhizobium sp. R5]
Length = 853
Score = 205 bits (522), Expect = 1e-59
Identities = 107/114 (93%), Positives = 111/114 (97%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVG+LGKART+GVAL P
Sbjct: 279 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGMLGKARTMGVALSP 338
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
IVS LLPVP QELLGGDVSFFL+CA+ALLLPTTLIGISFPLASELTVMQMSALG
Sbjct: 339 IVSGLLPVPVQELLGGDVSFFLVCAVALLLPTTLIGISFPLASELTVMQMSALG 392
>WP_029078222.1 spermidine synthase [Bradyrhizobium sp. th.b2]
Length = 853
Score = 201 bits (512), Expect = 2e-58
Identities = 106/114 (92%), Positives = 108/114 (94%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTV ILGKARTVG L P
Sbjct: 279 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVAILGKARTVGAVLSP 338
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
IVS LLPVP Q+LLGGDVSFFLICA+ALLLPTTLIGISFPLASELTVMQMSALG
Sbjct: 339 IVSGLLPVPVQQLLGGDVSFFLICAVALLLPTTLIGISFPLASELTVMQMSALG 392
>SEC84725.1 spermidine synthase [Bradyrhizobium erythrophlei]
Length = 904
Score = 202 bits (513), Expect = 3e-58
Identities = 106/114 (92%), Positives = 109/114 (95%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTV L P
Sbjct: 330 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVEAVLSP 389
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMSALG 342
IVS L+PVPAQELLGGDVSFFLICA+ALLLPTTLIG+SFPLASELTVMQMSALG
Sbjct: 390 IVSGLVPVPAQELLGGDVSFFLICAVALLLPTTLIGVSFPLASELTVMQMSALG 443
>WP_047860491.1 spermidine synthase [Archangium gephyra] AKJ07481.1 Spermidine
synthase [Archangium gephyra]
Length = 859
Score = 53.9 bits (128), Expect = 5e-06
Identities = 37/111 (33%), Positives = 56/111 (50%)
Frame = +1
Query: 1 LGVYLLGLVIGALICARLLAPRKDQLLRYFAVTQLLIAVAATLTVGILGKARTVGVALHP 180
L +LLGLV+G + + LA R +L F + L+A A L++ +LG +R V L
Sbjct: 273 LVTFLLGLVVGGFVYSLKLAGRVREL-ELFVTVESLLAFAGLLSMALLGLSRPVSQLLSG 331
Query: 181 IVSSLLPVPAQELLGGDVSFFLICAIALLLPTTLIGISFPLASELTVMQMS 333
+V P V L A+ +L+P +LIGI FPL +LT ++
Sbjct: 332 LVGGWGPNAVY------VGMLLHAALVILVPASLIGIIFPLVVQLTTRHVA 376