BLASTX nr result
ID: Glycyrrhiza28_contig00034362
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00034362
(223 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
KYP69874.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 65 2e-10
KYP45495.1 Retrovirus-related Pol polyprotein LINE-1, partial [C... 60 9e-09
KYP38810.1 Transposon TX1 uncharacterized [Cajanus cajan] 60 1e-08
KYP56473.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 59 3e-08
KYP55831.1 Retrovirus-related Pol polyprotein LINE-1, partial [C... 57 3e-08
KYP36982.1 Retrovirus-related Pol polyprotein LINE-1, partial [C... 58 5e-08
KYP53454.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 57 1e-07
KYP46503.1 LINE-1 reverse transcriptase isogeny, partial [Cajanu... 56 2e-07
KYP76194.1 Retrovirus-related Pol polyprotein LINE-1, partial [C... 56 2e-07
KYP65496.1 Transposon TX1 uncharacterized [Cajanus cajan] 56 2e-07
KYP43972.1 hypothetical protein KK1_034556 [Cajanus cajan] 53 2e-07
KYP71396.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 55 6e-07
KYP33787.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan] 54 1e-06
KYP72232.1 hypothetical protein KK1_004819 [Cajanus cajan] 50 3e-06
KYP67366.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 53 3e-06
KYP44246.1 Retrovirus-related Pol polyprotein LINE-1, partial [C... 51 3e-06
KYP61054.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 52 4e-06
GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterran... 52 5e-06
KYP42324.1 Putative ribonuclease H protein At1g65750 family [Caj... 52 5e-06
KYP53819.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus ca... 51 1e-05
>KYP69874.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 956
Score = 64.7 bits (156), Expect = 2e-10
Identities = 31/74 (41%), Positives = 45/74 (60%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R +N L +E G+W+ +P LE MVT+FY +LF D+ P L AFP L++D+L
Sbjct: 451 RRRNKVFKLLNENGDWMEQPAELERMVTTFYRTLFTDERHMEPFSLTNAFPRLNEDELST 510
Query: 181 LELEVTQGDILNVV 222
LE ++ G+I N V
Sbjct: 511 LETPISNGEIHNAV 524
>KYP45495.1 Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
Length = 351
Score = 59.7 bits (143), Expect = 9e-09
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R +N L +E G+W+ +P LE MVT+FY LF D+ P L AF L++D+L
Sbjct: 26 RRRNKVFKLLNENGDWMEQPAELERMVTTFYIMLFTDEGHMEPFSLTNAFSRLNEDELST 85
Query: 181 LELEVTQGDILNVV 222
LE ++ G+I N V
Sbjct: 86 LEAPISNGEIHNAV 99
>KYP38810.1 Transposon TX1 uncharacterized [Cajanus cajan]
Length = 738
Score = 59.7 bits (143), Expect = 1e-08
Identities = 30/74 (40%), Positives = 41/74 (55%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R KN +Q+E G WI + +LEA+ T FYS+LF D P CL +FP L Q D
Sbjct: 371 RRKNKVVKIQNELGEWIEDKAKLEALTTRFYSNLFTDSGRYEPYCLTNSFPELPQHDKDK 430
Query: 181 LELEVTQGDILNVV 222
L + +TQ +I +
Sbjct: 431 LAIPLTQQEIFTAL 444
>KYP56473.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 519
Score = 58.5 bits (140), Expect = 3e-08
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R +N L +E G+W+ + +LE MVT+FY ++F D+ P L FP L++D+L
Sbjct: 229 RRRNKVFKLLNENGDWMEQLAKLERMVTTFYRTIFTDEGHMEPFSLTNVFPRLNEDELST 288
Query: 181 LELEVTQGDILNVV 222
LE ++ G+I N V
Sbjct: 289 LETPISNGEIHNAV 302
>KYP55831.1 Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
Length = 182
Score = 57.0 bits (136), Expect = 3e-08
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R N L +E+ +W+ +P LE MVT+FY SLF D+ P L AFP L++D+L
Sbjct: 20 RRSNKVVKLMNEDRDWMEKPAELERMVTTFYKSLFTDEGNLEPFYLTNAFPRLNKDELST 79
Query: 181 LELEVTQGDI 210
LE+ ++ +I
Sbjct: 80 LEVPISNEEI 89
>KYP36982.1 Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
Length = 360
Score = 57.8 bits (138), Expect = 5e-08
Identities = 28/74 (37%), Positives = 38/74 (51%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R K L ++ +WI LE+MVT FY +LF D E P CL AFP L DDL +
Sbjct: 202 RRKRRIMKLMNDNDDWITHKDELESMVTKFYKNLFNDTEDDEPFCLSNAFPRLDDDDLSL 261
Query: 181 LELEVTQGDILNVV 222
+ + +I + V
Sbjct: 262 IGAPIKNDEIFSAV 275
>KYP53454.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 315
Score = 56.6 bits (135), Expect = 1e-07
Identities = 29/58 (50%), Positives = 34/58 (58%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDL 174
R KN LQ+EEG WI Q LE +VT FY +LF D P CL AFPSL+ +L
Sbjct: 80 RRKNKIVKLQNEEGVWIENKQELEHLVTDFYKNLFHDSGKYIPYCLTSAFPSLTAQEL 137
>KYP46503.1 LINE-1 reverse transcriptase isogeny, partial [Cajanus cajan]
Length = 363
Score = 56.2 bits (134), Expect = 2e-07
Identities = 23/74 (31%), Positives = 42/74 (56%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R K + L ++ W+ + +LE+MVT++Y SLF D P CL +FP L+ ++L +
Sbjct: 175 RRKGIFVKLMNDNDEWVTQKDKLESMVTTYYKSLFTDTGRTNPFCLSNSFPHLNDNELSL 234
Query: 181 LELEVTQGDILNVV 222
+ + + +I N +
Sbjct: 235 IGVSIRNDEIFNAI 248
>KYP76194.1 Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
Length = 553
Score = 56.2 bits (134), Expect = 2e-07
Identities = 28/74 (37%), Positives = 41/74 (55%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R KN +Q++ G+WI LE M T+FY SLF + P CL +FP +SQ+D M
Sbjct: 40 RRKNRIMRIQNDPGDWIENQSDLENMATTFYRSLFTEHGDYEPFCLSNSFPEISQEDKNM 99
Query: 181 LELEVTQGDILNVV 222
L ++ +I N +
Sbjct: 100 LAAPLSHQEIWNAL 113
>KYP65496.1 Transposon TX1 uncharacterized [Cajanus cajan]
Length = 563
Score = 55.8 bits (133), Expect = 2e-07
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R ++ + L +++G W+ P LE MVTSFY+SLF ++ CL AFP LS+ +L
Sbjct: 360 RRRSKVDKLMNDDGEWVEHPAELERMVTSFYTSLFTNEGISTAFCLTNAFPRLSEAELST 419
Query: 181 LELEVTQGDILNVV 222
L ++ +I + V
Sbjct: 420 LGAPISNEEIHHTV 433
>KYP43972.1 hypothetical protein KK1_034556 [Cajanus cajan]
Length = 104
Score = 53.1 bits (126), Expect = 2e-07
Identities = 23/73 (31%), Positives = 41/73 (56%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R +N E L ++ W+ + L+ MVT+FY +LF CL AFP L +++L +
Sbjct: 17 RRRNKVEKLMNDNNKWVTQQGELKKMVTNFYKTLFSYTRTSTTVCLTNAFPQLDEEELAV 76
Query: 181 LELEVTQGDILNV 219
+E +++ +I +V
Sbjct: 77 IESQISNEEIYSV 89
>KYP71396.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 733
Score = 54.7 bits (130), Expect = 6e-07
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R +N ++LQDE G WI + LE +VT+FY LF++ +P P L G FP + +
Sbjct: 431 RQRNKVKMLQDESGRWISDKAELEGLVTNFYKDLFQNIDPYTPFNLTGYFPEVHDSLMQN 490
Query: 181 LELEVTQGDILNVV 222
L ++ + +I +
Sbjct: 491 LGRDIIEDEIFGAI 504
>KYP33787.1 LINE-1 reverse transcriptase isogeny [Cajanus cajan]
Length = 309
Score = 53.9 bits (128), Expect = 1e-06
Identities = 27/72 (37%), Positives = 40/72 (55%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R KN+ +Q++ G+WI LE M T+FY SLF + P CL + P +SQ+D M
Sbjct: 4 RRKNTIMRIQNDSGDWIENQSDLENMETTFYRSLFTEHGDYEPFCLSNSLPEISQEDKNM 63
Query: 181 LELEVTQGDILN 216
L ++ +I N
Sbjct: 64 LAAPLSHQEIWN 75
>KYP72232.1 hypothetical protein KK1_004819 [Cajanus cajan]
Length = 104
Score = 50.4 bits (119), Expect = 3e-06
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R +N E L +++ W+ + + LEAMVT +Y LF + CL AFPSL +L +
Sbjct: 17 RRRNKVERLLNDQALWVMQQEELEAMVTEYYKHLFLESGDHNNLCLQNAFPSLGTAELEV 76
Query: 181 LELEVTQGDILNVV 222
+ ++ +IL +
Sbjct: 77 IGRPISDEEILQAI 90
>KYP67366.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 463
Score = 52.8 bits (125), Expect = 3e-06
Identities = 30/74 (40%), Positives = 39/74 (52%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R +N LQD+EG I + LE MVT+FY LF+D E P CL FP+LS +L
Sbjct: 304 RRQNRIVKLQDDEGTSIENKRDLELMVTAFYKRLFKDPEVYVPYCLTSTFPALSAQELEA 363
Query: 181 LELEVTQGDILNVV 222
L + +I V
Sbjct: 364 FSLPFSDLEIHGAV 377
>KYP44246.1 Retrovirus-related Pol polyprotein LINE-1, partial [Cajanus cajan]
Length = 154
Score = 51.2 bits (121), Expect = 3e-06
Identities = 29/74 (39%), Positives = 40/74 (54%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R +N E L DE NW+ + LE MVT+FY +LF P CL AFP L Q++L
Sbjct: 63 RRRNRIEKLMDENDNWVLRHEDLEVMVTNFYKALF-STTVSPPFCLSHAFPLLEQEELQE 121
Query: 181 LELEVTQGDILNVV 222
+ ++ +IL V
Sbjct: 122 IGKPISDTEILLAV 135
>KYP61054.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 636
Score = 52.4 bits (124), Expect = 4e-06
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPT--CLFGAFPSLSQDDL 174
R +N E L ++ WI +P+ +E++VTSFY LF D P G T CL AFPSL + L
Sbjct: 17 RRRNRIEKLLNDNNEWINQPEEMESLVTSFYKDLFCD--PGGATRFCLSNAFPSLGMEML 74
Query: 175 GMLELEVTQGDILNVV 222
+ + +I +
Sbjct: 75 SEIGKPINNDEIKQAI 90
>GAU26239.1 hypothetical protein TSUD_224300 [Trifolium subterraneum]
Length = 1250
Score = 52.0 bits (123), Expect = 5e-06
Identities = 25/74 (33%), Positives = 39/74 (52%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R N E +Q+ EG W+ + +E + T FY LF +++ P L GAFP++ + L
Sbjct: 249 RRHNKVETIQNAEGVWVTDQHEMEMVATDFYKCLFTNNDLFTPFFLAGAFPNIDEHKLNF 308
Query: 181 LELEVTQGDILNVV 222
L+ VT +I V
Sbjct: 309 LDQPVTNREIYEAV 322
>KYP42324.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]
Length = 1443
Score = 52.0 bits (123), Expect = 5e-06
Identities = 27/70 (38%), Positives = 38/70 (54%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R KN LQDE G WI + +LE +V FY LF + P CL +FP L+ D+ +
Sbjct: 446 RRKNRIIKLQDEVGVWIEDKAKLENLVNRFYMELFTNSGGHEPFCLSKSFPELTSGDMQI 505
Query: 181 LELEVTQGDI 210
LE ++ +I
Sbjct: 506 LEAPLSDHEI 515
>KYP53819.1 Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
Length = 404
Score = 51.2 bits (121), Expect = 1e-05
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +1
Query: 1 RGKNSYEVLQDEEGNWIGEPQRLEAMVTSFYSSLFRDDEPRGPTCLFGAFPSLSQDDLGM 180
R +N E L +++ W+ + + LEAMVT +Y LF + CL AFPSL +L +
Sbjct: 17 RRRNKVERLLNDQALWVTQQEELEAMVTEYYKHLFLESGDHNNLCLQNAFPSLGTAELDV 76
Query: 181 LELEVTQGDILNVV 222
+ ++ +IL +
Sbjct: 77 IGRPISDEEILQAI 90