BLASTX nr result

ID: Glycyrrhiza28_contig00021877 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00021877
         (435 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

GAU35646.1 hypothetical protein TSUD_394860 [Trifolium subterran...    57   1e-06
XP_004502080.1 PREDICTED: pentatricopeptide repeat-containing pr...    55   5e-06

>GAU35646.1 hypothetical protein TSUD_394860 [Trifolium subterraneum]
          Length = 571

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 45/98 (45%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
 Frame = -1

Query: 276 MWRSILAKQRHA------VRFSSRIQVTPSNSNSHLINPTPPLPQSKTSCSLIFPQSSYF 115
           MWRSILA+QR A      V ++S+IQV  SN    ++NPT     S TS SL FPQ S  
Sbjct: 1   MWRSILARQRCAILRNYNVNYASQIQVPLSN---FILNPT----NSTTSYSLGFPQISNL 53

Query: 114 CNNNHYPRCFSHQIADSTEGGVSMDPSSS-ENDDGVVH 4
            N  + PR  S+QIA  TE  V +D  +  EN D  VH
Sbjct: 54  SNTVNNPRFLSNQIA--TENDVPIDSKTDLENGDFSVH 89


>XP_004502080.1 PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial [Cicer arietinum]
          Length = 581

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
 Frame = -1

Query: 276 MWRSILAKQRHAVRFSSRIQVTPSNSN---SHLINPTPPLPQSKTSCSLIFPQSSYFCNN 106
           MWRSILA+QR+ +R  +     P       S+ I  +P    + +S SL FPQ SY  N 
Sbjct: 1   MWRSILARQRYPIRHYNAYASPPFQFQVPLSNFILNSPKSITTSSSYSLGFPQISYLSNI 60

Query: 105 NHYPRCFSHQIADSTEGGVSMDPSSSENDDGVVH 4
            + PR FS+Q+A   +  V  D  S +N D  VH
Sbjct: 61  INNPRFFSNQVASQNDSPV--DSYSPQNHDDAVH 92


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