BLASTX nr result
ID: Glycyrrhiza28_contig00016501
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza28_contig00016501
(244 letters)
Database: ./nr
115,041,592 sequences; 42,171,959,267 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ERF82215.1 hypothetical protein C207_04593 [Bradyrhizobium sp. D... 160 1e-44
ACI94810.1 carbohydrate-selective porin OprB [Oligotropha carbox... 155 9e-43
WP_042201142.1 porin [Oligotropha carboxidovorans] 155 1e-42
AEI04672.1 carbohydrate-selective porin OprB (plasmid) [Oligotro... 155 1e-42
WP_012041717.1 porin [Bradyrhizobium sp. BTAi1] ABQ33676.1 hypot... 137 5e-36
WP_040427456.1 MULTISPECIES: porin [Bradyrhizobiaceae] 137 7e-36
KJC62578.1 porin [Bradyrhizobium sp. LTSPM299] 134 4e-35
WP_044585762.1 porin [Bradyrhizobium sp. LTSPM299] 134 4e-35
WP_044537560.1 porin [Bradyrhizobium sp. LTSP885] KJC48690.1 por... 134 6e-35
WP_074281630.1 porin [Bradyrhizobium erythrophlei] SIO67724.1 Ca... 131 9e-35
EKS37411.1 hypothetical protein HMPREF9695_03829 [Afipia broomea... 131 3e-34
WP_049795435.1 MULTISPECIES: porin [Bradyrhizobiaceae] 131 6e-34
ABQ39148.1 putative exported protein of unknown function [Bradyr... 131 6e-34
SHK48084.1 high affinity Mn2+ porin [Bradyrhizobium lablabi] 130 1e-33
WP_024341973.1 porin [Bradyrhizobium japonicum] 128 7e-33
WP_041750681.1 porin [Bradyrhizobium sp. BTAi1] 128 1e-32
ABQ35510.1 putative outer membrane protein of unknown function [... 128 1e-32
WP_008964241.1 porin [Bradyrhizobium sp. STM 3809] CCE01681.1 co... 128 1e-32
WP_062313637.1 porin [Bradyrhizobium sp. CCH10-C7] SEP33929.1 hi... 125 6e-32
WP_061979343.1 porin [Bradyrhizobium sp. CCH4-A6] 125 6e-32
>ERF82215.1 hypothetical protein C207_04593 [Bradyrhizobium sp. DFCI-1]
Length = 667
Score = 160 bits (406), Expect = 1e-44
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGL FSGSQTSDRL
Sbjct: 325 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLNQFSGSQTSDRL 384
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
VFTVGKFSVGDIFDTNKYAHD
Sbjct: 385 VFTVGKFSVGDIFDTNKYAHD 405
>ACI94810.1 carbohydrate-selective porin OprB [Oligotropha carboxidovorans OM5]
Length = 660
Score = 155 bits (393), Expect = 9e-43
Identities = 76/81 (93%), Positives = 77/81 (95%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S SVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGE+QKVDAGL FSGSQTSDRL
Sbjct: 318 SASVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEIQKVDAGLNQFSGSQTSDRL 377
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
V TVGKFSVGDIFDTNKYAHD
Sbjct: 378 VLTVGKFSVGDIFDTNKYAHD 398
>WP_042201142.1 porin [Oligotropha carboxidovorans]
Length = 695
Score = 155 bits (393), Expect = 1e-42
Identities = 76/81 (93%), Positives = 77/81 (95%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S SVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGE+QKVDAGL FSGSQTSDRL
Sbjct: 353 SASVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEIQKVDAGLNQFSGSQTSDRL 412
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
V TVGKFSVGDIFDTNKYAHD
Sbjct: 413 VLTVGKFSVGDIFDTNKYAHD 433
>AEI04672.1 carbohydrate-selective porin OprB (plasmid) [Oligotropha
carboxidovorans OM4] AEI08301.1 carbohydrate-selective
porin OprB (plasmid) [Oligotropha carboxidovorans OM5]
Length = 711
Score = 155 bits (393), Expect = 1e-42
Identities = 76/81 (93%), Positives = 77/81 (95%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S SVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGE+QKVDAGL FSGSQTSDRL
Sbjct: 369 SASVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEIQKVDAGLNQFSGSQTSDRL 428
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
V TVGKFSVGDIFDTNKYAHD
Sbjct: 429 VLTVGKFSVGDIFDTNKYAHD 449
>WP_012041717.1 porin [Bradyrhizobium sp. BTAi1] ABQ33676.1 hypothetical protein
BBta_1454 [Bradyrhizobium sp. BTAi1]
Length = 665
Score = 137 bits (345), Expect = 5e-36
Identities = 64/81 (79%), Positives = 71/81 (87%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S SVGAAGFPSGEAYKVGA+YPY RLHRAFLRQTIDLGG+VQK+D+G F+GS TSDRL
Sbjct: 323 SSSVGAAGFPSGEAYKVGANYPYVRLHRAFLRQTIDLGGDVQKIDSGFNQFAGSTTSDRL 382
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
V T+GK + DIFDTNKYAHD
Sbjct: 383 VITLGKIGIPDIFDTNKYAHD 403
>WP_040427456.1 MULTISPECIES: porin [Bradyrhizobiaceae]
Length = 677
Score = 137 bits (344), Expect = 7e-36
Identities = 62/81 (76%), Positives = 71/81 (87%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S ++G AGFPSGEAYKVGA YPYTRLHR F+RQTIDLGGE QKVD+ + F+GSQT+DRL
Sbjct: 334 SNTLGVAGFPSGEAYKVGAEYPYTRLHRMFIRQTIDLGGEKQKVDSNISQFNGSQTADRL 393
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
V T+GKF VGD+FDTNKYAHD
Sbjct: 394 VITIGKFGVGDVFDTNKYAHD 414
>KJC62578.1 porin [Bradyrhizobium sp. LTSPM299]
Length = 667
Score = 134 bits (338), Expect = 4e-35
Identities = 63/81 (77%), Positives = 70/81 (86%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S ++G AGF SGEAYK GA YPYTRLHRAF+RQTIDLGGE Q VDAG+ F+ +QT+DRL
Sbjct: 325 SGTLGVAGFTSGEAYKKGADYPYTRLHRAFIRQTIDLGGETQTVDAGINQFAATQTADRL 384
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
VFTVGKF VGDIFDTNKYAHD
Sbjct: 385 VFTVGKFGVGDIFDTNKYAHD 405
>WP_044585762.1 porin [Bradyrhizobium sp. LTSPM299]
Length = 674
Score = 134 bits (338), Expect = 4e-35
Identities = 63/81 (77%), Positives = 70/81 (86%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S ++G AGF SGEAYK GA YPYTRLHRAF+RQTIDLGGE Q VDAG+ F+ +QT+DRL
Sbjct: 332 SGTLGVAGFTSGEAYKKGADYPYTRLHRAFIRQTIDLGGETQTVDAGINQFAATQTADRL 391
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
VFTVGKF VGDIFDTNKYAHD
Sbjct: 392 VFTVGKFGVGDIFDTNKYAHD 412
>WP_044537560.1 porin [Bradyrhizobium sp. LTSP885] KJC48690.1 porin [Bradyrhizobium
sp. LTSP885]
Length = 674
Score = 134 bits (337), Expect = 6e-35
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S ++G AGF SGEAYK GA YPYTRLHRAF+RQTIDLGGE Q VDAG+ F+ +QT+DRL
Sbjct: 332 SGTLGVAGFTSGEAYKKGADYPYTRLHRAFIRQTIDLGGETQTVDAGINQFAATQTADRL 391
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
VFTVGKF VGD+FDTNKYAHD
Sbjct: 392 VFTVGKFGVGDVFDTNKYAHD 412
>WP_074281630.1 porin [Bradyrhizobium erythrophlei] SIO67724.1
Carbohydrate-selective porin, OprB family
[Bradyrhizobium erythrophlei]
Length = 447
Score = 131 bits (330), Expect = 9e-35
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S + G AGFPS EAYKVG+SYPY R+ RAFLRQTIDLGG+VQKV+AG+ F+GSQT+DRL
Sbjct: 105 SGTFGVAGFPSAEAYKVGSSYPYARIPRAFLRQTIDLGGDVQKVNAGINQFAGSQTTDRL 164
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
V TVGKFSV DIFDTNKYAHD
Sbjct: 165 VITVGKFSVVDIFDTNKYAHD 185
>EKS37411.1 hypothetical protein HMPREF9695_03829 [Afipia broomeae ATCC 49717]
Length = 547
Score = 131 bits (330), Expect = 3e-34
Identities = 60/81 (74%), Positives = 69/81 (85%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S ++G AGFPSGEAYKVGA YPYTRL R F+RQTIDLGGE QKV++ F+GSQT+DRL
Sbjct: 204 SNTLGVAGFPSGEAYKVGAEYPYTRLQRMFVRQTIDLGGEKQKVESNFNQFAGSQTADRL 263
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
V T+GKF VGD+FDTNKYAHD
Sbjct: 264 VITIGKFGVGDVFDTNKYAHD 284
>WP_049795435.1 MULTISPECIES: porin [Bradyrhizobiaceae]
Length = 691
Score = 131 bits (330), Expect = 6e-34
Identities = 60/81 (74%), Positives = 69/81 (85%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S ++G AGFPSGEAYKVGA YPYTRL R F+RQTIDLGGE QKV++ F+GSQT+DRL
Sbjct: 348 SNTLGVAGFPSGEAYKVGAEYPYTRLQRMFVRQTIDLGGEKQKVESNFNQFAGSQTADRL 407
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
V T+GKF VGD+FDTNKYAHD
Sbjct: 408 VITIGKFGVGDVFDTNKYAHD 428
>ABQ39148.1 putative exported protein of unknown function [Bradyrhizobium sp.
BTAi1]
Length = 693
Score = 131 bits (330), Expect = 6e-34
Identities = 60/81 (74%), Positives = 69/81 (85%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S ++G AGFPSGEAYKVGA YPYTRL R F+RQTIDLGGE QKV++ F+GSQT+DRL
Sbjct: 350 SNTLGVAGFPSGEAYKVGAEYPYTRLQRMFVRQTIDLGGEKQKVESNFNQFAGSQTADRL 409
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
V T+GKF VGD+FDTNKYAHD
Sbjct: 410 VITIGKFGVGDVFDTNKYAHD 430
>SHK48084.1 high affinity Mn2+ porin [Bradyrhizobium lablabi]
Length = 684
Score = 130 bits (327), Expect = 1e-33
Identities = 63/82 (76%), Positives = 72/82 (87%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGE-VQKVDAGLRAFSGSQTSDR 177
S S+G AGFPSGEAYKVGA YPY R+HRAFLRQTIDLGG+ ++ +DAGL FSG++TSDR
Sbjct: 341 SGSLGVAGFPSGEAYKVGADYPYLRVHRAFLRQTIDLGGDAIEHLDAGLNQFSGTRTSDR 400
Query: 178 LVFTVGKFSVGDIFDTNKYAHD 243
LVFTVGKF V DIFDTN+YAHD
Sbjct: 401 LVFTVGKFGVVDIFDTNQYAHD 422
>WP_024341973.1 porin [Bradyrhizobium japonicum]
Length = 680
Score = 128 bits (322), Expect = 7e-33
Identities = 62/77 (80%), Positives = 68/77 (88%)
Frame = +1
Query: 13 GAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRLVFTV 192
G AGFPS EAYKVGA+YPY R+ RAFLRQTIDLGGEVQKV++G F+GSQTSDRLV TV
Sbjct: 342 GVAGFPSAEAYKVGATYPYARIPRAFLRQTIDLGGEVQKVESGPMQFAGSQTSDRLVLTV 401
Query: 193 GKFSVGDIFDTNKYAHD 243
GKFSV DIFD+NKYAHD
Sbjct: 402 GKFSVVDIFDSNKYAHD 418
>WP_041750681.1 porin [Bradyrhizobium sp. BTAi1]
Length = 677
Score = 128 bits (321), Expect = 1e-32
Identities = 62/77 (80%), Positives = 68/77 (88%)
Frame = +1
Query: 13 GAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRLVFTV 192
G AGFPS EAYKVGA+YPY R+ RAFLRQTIDLGGEVQKV++G F+GSQTSDRLV TV
Sbjct: 339 GVAGFPSAEAYKVGATYPYARVPRAFLRQTIDLGGEVQKVESGPMQFAGSQTSDRLVLTV 398
Query: 193 GKFSVGDIFDTNKYAHD 243
GKFSV DIFD+NKYAHD
Sbjct: 399 GKFSVVDIFDSNKYAHD 415
>ABQ35510.1 putative outer membrane protein of unknown function [Bradyrhizobium
sp. BTAi1]
Length = 680
Score = 128 bits (321), Expect = 1e-32
Identities = 62/77 (80%), Positives = 68/77 (88%)
Frame = +1
Query: 13 GAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRLVFTV 192
G AGFPS EAYKVGA+YPY R+ RAFLRQTIDLGGEVQKV++G F+GSQTSDRLV TV
Sbjct: 342 GVAGFPSAEAYKVGATYPYARVPRAFLRQTIDLGGEVQKVESGPMQFAGSQTSDRLVLTV 401
Query: 193 GKFSVGDIFDTNKYAHD 243
GKFSV DIFD+NKYAHD
Sbjct: 402 GKFSVVDIFDSNKYAHD 418
>WP_008964241.1 porin [Bradyrhizobium sp. STM 3809] CCE01681.1 conserved exported
hypothetical protein [Bradyrhizobium sp. STM 3809]
Length = 680
Score = 128 bits (321), Expect = 1e-32
Identities = 62/77 (80%), Positives = 68/77 (88%)
Frame = +1
Query: 13 GAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRLVFTV 192
G AGFPS EAYKVGA+YPY R+ RAFLRQTIDLGGEVQKV++G F+GSQTSDRLV TV
Sbjct: 342 GVAGFPSAEAYKVGATYPYARVPRAFLRQTIDLGGEVQKVESGPMQFAGSQTSDRLVLTV 401
Query: 193 GKFSVGDIFDTNKYAHD 243
GKFSV DIFD+NKYAHD
Sbjct: 402 GKFSVVDIFDSNKYAHD 418
>WP_062313637.1 porin [Bradyrhizobium sp. CCH10-C7] SEP33929.1 high affinity Mn2+
porin [Rhodopseudomonas pseudopalustris]
Length = 663
Score = 125 bits (315), Expect = 6e-32
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S +VG AGFPSGEAYKVGA+ PY R+ RAF RQT DLGGE +K+DA + F+GSQTSDRL
Sbjct: 321 SSTVGVAGFPSGEAYKVGAAVPYARIPRAFFRQTFDLGGETKKIDADINQFAGSQTSDRL 380
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
+ T+GKF+V D+FDTNKYAHD
Sbjct: 381 ILTLGKFAVTDVFDTNKYAHD 401
>WP_061979343.1 porin [Bradyrhizobium sp. CCH4-A6]
Length = 663
Score = 125 bits (315), Expect = 6e-32
Identities = 57/81 (70%), Positives = 68/81 (83%)
Frame = +1
Query: 1 SKSVGAAGFPSGEAYKVGASYPYTRLHRAFLRQTIDLGGEVQKVDAGLRAFSGSQTSDRL 180
S +VG AGFPSGEAYKVGA+ PY R+ RAF RQT DLGGE +K+DA + F+GSQTSDRL
Sbjct: 321 SSTVGVAGFPSGEAYKVGAAVPYARIPRAFFRQTFDLGGETKKIDADINQFAGSQTSDRL 380
Query: 181 VFTVGKFSVGDIFDTNKYAHD 243
+ T+GKF+V D+FDTNKYAHD
Sbjct: 381 ILTLGKFAVTDVFDTNKYAHD 401