BLASTX nr result

ID: Glycyrrhiza28_contig00010885 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00010885
         (588 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

OAY23166.1 hypothetical protein MANES_18G057200 [Manihot esculenta]    58   1e-06
XP_015886079.1 PREDICTED: probable rhamnogalacturonate lyase B [...    57   3e-06
XP_018859287.1 PREDICTED: probable rhamnogalacturonate lyase B [...    56   6e-06
XP_015886044.1 PREDICTED: rhamnogalacturonate lyase-like [Ziziph...    56   6e-06
XP_018853117.1 PREDICTED: probable rhamnogalacturonate lyase B, ...    56   8e-06

>OAY23166.1 hypothetical protein MANES_18G057200 [Manihot esculenta]
          Length = 579

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 32/88 (36%), Positives = 44/88 (50%)
 Frame = -2

Query: 266 DEMLVEIKIRQYSFPEPKDFQKWESRDTINGWLLVSKRSKIATSNVFAWDSVDICAFENV 87
           ++ML+E++   YSFP  +DF     R  ++G LLV              DS+   +  N 
Sbjct: 310 EQMLIEVQSWPYSFPASEDFPTCSQRGNVSGRLLVR-------------DSLRSYSNSNN 356

Query: 86  VILDMIADCGIAIGDLVYEPPIDGPILW 3
                 A C I +GD+VYEPP DGP LW
Sbjct: 357 ECFSSCASCDIDLGDIVYEPPRDGPTLW 384


>XP_015886079.1 PREDICTED: probable rhamnogalacturonate lyase B [Ziziphus jujuba]
          Length = 589

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 18/105 (17%)
 Frame = -2

Query: 263 EMLVEIKIRQYSFPEPKDFQKWESRDTINGWLLVSKRS------------------KIAT 138
           +M+ E++   YSFP  +DFQK E R  I G LLV  R                   +   
Sbjct: 308 QMMTEVQSWPYSFPASEDFQKSEQRGNIGGRLLVFDRDYQFWTRADENGYFSINNVRTGD 367

Query: 137 SNVFAWDSVDICAFENVVILDMIADCGIAIGDLVYEPPIDGPILW 3
            N++AW    I  +   V++ + +   I +G L+YEPP DGP LW
Sbjct: 368 YNLYAWVPGFIGDYRYDVVVTVTSGSLIEMGYLIYEPPRDGPTLW 412


>XP_018859287.1 PREDICTED: probable rhamnogalacturonate lyase B [Juglans regia]
          Length = 603

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 29/73 (39%), Positives = 44/73 (60%)
 Frame = -2

Query: 221 EPKDFQKWESRDTINGWLLVSKRSKIATSNVFAWDSVDICAFENVVILDMIADCGIAIGD 42
           E KD+Q W + D  +G+  +S   +I   N++AW    I  ++  V++ + A C I +GD
Sbjct: 378 ECKDYQFWTNADE-DGYFFISD-IRIGDYNLYAWIPGYIGDYKYDVVVSITAGCAIEMGD 435

Query: 41  LVYEPPIDGPILW 3
           LVY+PP DGP LW
Sbjct: 436 LVYKPPRDGPTLW 448


>XP_015886044.1 PREDICTED: rhamnogalacturonate lyase-like [Ziziphus jujuba]
          Length = 645

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 29/73 (39%), Positives = 42/73 (57%)
 Frame = -2

Query: 221 EPKDFQKWESRDTINGWLLVSKRSKIATSNVFAWDSVDICAFENVVILDMIADCGIAIGD 42
           E K +Q W   D  NG+  +++  +I   N++AW    I  + N  +  + A C I +GD
Sbjct: 379 ECKGYQFWTRADE-NGYFAINE-IRIGDYNLYAWVPGFIGDYRNDQLFQITAGCDIDVGD 436

Query: 41  LVYEPPIDGPILW 3
           +VYEPP DGPILW
Sbjct: 437 IVYEPPRDGPILW 449


>XP_018853117.1 PREDICTED: probable rhamnogalacturonate lyase B, partial [Juglans
           regia]
          Length = 518

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 29/73 (39%), Positives = 44/73 (60%)
 Frame = -2

Query: 221 EPKDFQKWESRDTINGWLLVSKRSKIATSNVFAWDSVDICAFENVVILDMIADCGIAIGD 42
           E KD+Q W + D  +G+  +S   +I   N++AW    I  ++  V++ + A C I +GD
Sbjct: 378 ECKDYQFWTNADE-DGFFFISD-IRIGDYNLYAWIPGYIGDYKYDVVVSITAGCAIEMGD 435

Query: 41  LVYEPPIDGPILW 3
           LVY+PP DGP LW
Sbjct: 436 LVYKPPRDGPTLW 448


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