BLASTX nr result

ID: Glycyrrhiza28_contig00008708 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza28_contig00008708
         (215 letters)

Database: ./nr 
           115,041,592 sequences; 42,171,959,267 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

XP_015936322.1 PREDICTED: translation initiation factor IF-2 [Ar...    54   1e-06
XP_017971819.1 PREDICTED: vegetative cell wall protein gp1 [Theo...    53   2e-06
EOX99544.1 Proteophosphoglycan-related, putative [Theobroma cacao]     53   2e-06

>XP_015936322.1 PREDICTED: translation initiation factor IF-2 [Arachis duranensis]
          Length = 266

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 38/93 (40%), Positives = 41/93 (44%), Gaps = 42/93 (45%)
 Frame = +2

Query: 2   SPKPDKFVPPHRRPGFVP-----------------------HLRQPGH------------ 76
           SPKPDKFVPPH RPG+VP                       H+  PG             
Sbjct: 132 SPKPDKFVPPHLRPGYVPKVEEVPPGPEMGRGRDLNYRRGAHVGSPGKYGEDGRPKSGGY 191

Query: 77  ------DGSDMGLMGCPR-LSGNRPSSSG*MVM 154
                  GSD GLMG PR  SG+RPSSSG  VM
Sbjct: 192 ERIRRAGGSDAGLMGRPRSSSGSRPSSSGWYVM 224


>XP_017971819.1 PREDICTED: vegetative cell wall protein gp1 [Theobroma cacao]
          Length = 225

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 34/83 (40%), Positives = 37/83 (44%), Gaps = 36/83 (43%)
 Frame = +2

Query: 2   SPKPDKFVPPHRRPGFVPHLRQPG---------------------HDG------------ 82
           SPKPD+FVPPH RPGFV    +PG                      DG            
Sbjct: 143 SPKPDRFVPPHLRPGFVGREERPGPQVFRGREQSQKHFGSPGRYGEDGRPKSGGYEKMRR 202

Query: 83  ---SDMGLMGCPRLSGNRPSSSG 142
              SD+GL   PR SGNRPSSSG
Sbjct: 203 GGESDLGLTDRPRSSGNRPSSSG 225


>EOX99544.1 Proteophosphoglycan-related, putative [Theobroma cacao]
          Length = 241

 Score = 52.8 bits (125), Expect = 2e-06
 Identities = 34/83 (40%), Positives = 37/83 (44%), Gaps = 36/83 (43%)
 Frame = +2

Query: 2   SPKPDKFVPPHRRPGFVPHLRQPG---------------------HDG------------ 82
           SPKPD+FVPPH RPGFV    +PG                      DG            
Sbjct: 143 SPKPDRFVPPHLRPGFVGREERPGPQVFRGREQSQKHFGSPGRYGEDGRPKTGGYEKMRR 202

Query: 83  ---SDMGLMGCPRLSGNRPSSSG 142
              SD+GL   PR SGNRPSSSG
Sbjct: 203 GGESDLGLTDRPRSSGNRPSSSG 225


Top